Sceloporus undulatus (fence lizard): 121917303
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Entry
121917303 CDS
T07740
Name
(RefSeq) laminin subunit alpha-1-like isoform X1
KO
K05637
laminin, alpha 1/2
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04510
Focal adhesion
sund04512
ECM-receptor interaction
sund04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121917303
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121917303
09142 Cell motility
04820 Cytoskeleton in muscle cells
121917303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
F5_F8_type_C
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
121917303
NCBI-ProteinID:
XP_042299086
LinkDB
All DBs
Position
Unknown
AA seq
3102 aa
AA seq
DB search
MQGPPGRCSGPRQASLLLLLLLLLLLLFSSSSEGQLRGLFPAILNLASNAHISTNATCGE
KGPEMFCKLVEHVPGRPLRNAQCRICDHNSSNPKEQHPISNAIDGTNNWWQSPSIQNGRE
YHWVTITLDLRQVFQVAYIIIKAANAPRPGNWILERSVDGTEFRPWQYYAISDTECLTRY
NVTPRIGPPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSEKLLAFTSARY
IRLQLQRIRTLNADLMTLSHHDPKDVDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDN
ETKKLQCQCEHNTCGESCNECCPGYHQAPWRPGTISAGNKCERCNCHHKAEDCYYDQTVA
DQKKSINIYGQFKGGGVCINCTQHTTGINCEICTDGYYRPHKVSPYDNNPCLPCECDLFG
SFGSDCVKDDDHADPQHGIQAGQCHCKDGYTGEKCDHCAFGYKGYPNCVHCNCSLVGSIN
DDPCIEPCLCKENVEGENCDRCKPGFYNLQERNPQGCTECFCFGVSDVCESLPWPISQVS
SMAGWLVTAPYTLKTVDPEESQLDGPPQIIINNIAVAKMLKSPYYWSAPKPYLGNKLTSF
GGYLKYTVSYDIPMDSTDSDLVSNVDVIIQGNGQMLATRAEGLSLQPYEEYSSSVKLVSE
NFVDFNTKKSIDRDILMKVLANVTHILLRASYNIAKRAVYRLDSVILDTANANLVDPSSA
ADVEYCECPQGYAGISCESCLPGYYRVDGILFGGICLQCDCNGHATECDIHGVCLICEHN
TTGHSCDECLPGFYGSPTKGTAEDCQPCACPLRTPTNNFSPTCYLESSGEVICDKCSPGY
AGSKCERCANGYYGDPLVPGQSCIPCDCNGNVDMMEDGYCNSITGECLKCTGNTVGHHCE
RCADGYYGDAVINKDCHACKCNMNSSVSSICHHETGLCQCKMNVVGQRCDKCLFGYYGLS
TGLGCLPCNCSKAGSVAEDCNDEGQCRCVPGVAGEKCDRCAHGFYAFQDGGCTPCNCTHT
LNACDEDSGECICPPHTEGEKCELCEENFWGLDPEKGCKVCNCSDLGSVSLQCDQLTARC
ECKHGYGGDNCDECALGYRDYPDCVPCDCDLRGSKANTCDQSQGICNCEEETGVCVCKEN
VFGLHCSECKTGTFALHAINPLGCIPCFCSGRSEVCTEVEDYVRVSLTLTPQQSVMYVVS
QSNLTGTSEGVFSQYPDILMDATIVRQHLNAEPFYWKLPHQFQGDQLMTYGGKLKYSVAF
YALDGMGTSNLEPQILMKGGHTSKYVIYVDIPAPENGVRHDEEIVMMESAWKYFNSVSDE
SVSHSDFMSVLSNVEYILIKASYGQGLQQSRIANVSMDIAVKADDAPFTRDTAFHIEKCL
CPVGYAGLSCQDCAPGYYREKHTGVHLKYSSCMPCECNNHSDTCDPKTGKCLDCKDNTVG
DHCSLCAPGFYGKVIGSVNDCSLCACPRTSPGSFSSTCILKGVNDFHCDACIIGYEGQYC
ERCSPTYYGDPKSPGGSCQQCHCNPDGSVHNNCDHISGQCVCKQGVAGWLCDECEPRHIL
MDNDCISCDDDCTGLLLNDLDNLEEAIFLVNLTGAVLAPYGVLSDLENTTKQYKGSFWVK
EEPSYSLEIMHDRLVSLSGDVDQLHKESPIILGRGKHLSSDTEKTLKKSQELAMFISTLQ
ESVTVLIEVATSVNETLGTDFPLSNRTLQELQDEIPTMLDVMRGRHFKHLHQNSTLELKA
AERLLARIQKEYWRPQQELKVLQKNVKRTLSDHSTSLQEAKNVVNEASTNINETNRLLFL
INSNLKECNNKKSSIQEDQKLSVVLTREGKVQVDAAATIAKRVINSTSSLEIHRDGLMLW
NDKLRQHVDNLVKQISTRGALDLVYRTEDHAASLQRIVRALDNGLLDVRNVSLNATNAVH
AYSTIKSLIENAESLAGDAYRTVTESVPVSKESFNSTEKNVLQPSSKLLTEAKSLHKKYE
GLVSGLYDMNIRVGKFKEQANRIAKQFNDSMLQLNALPNDTSENILAVKFLAVSANVTAV
NGLSHTGYFSEKLLNTSSALSEVNETLQKTNELIIDSSKAAASAEKKVNEVEIQAGLLFG
RLKPLKVLEENLSRNISEIKELISQARKQAASIKVAVSAERDCIRAYQPQILSTNYNTLT
LNVKTTEPDNLLFYLGSSGKIDFMAVEMRRGKVAFLWDMGSGSTRLEYPDFPINNNKWYK
IHATRFGKTGTLTVEETNSLQKPFMRAATSPGTATVLDIDHSSLMFIGGLGGQIKKSPAV
KVTHFKGCMGEAVLNGKSVGLWNYLEREGKCRGCFGSPQDEDISFHFDGSGYSVVEKALR
STVTQIIVFFSTFSPNGLLVYLASNGTKDFLSLELVDGKVKLMVDLGSGSLTLQTESRYN
NGTWYKISFSRNKKEGILAVMDAYNLSSKETKQGESPGVASDLNRSDRDPIYIGGLPRSR
TVRKGLSTRTYVGCIKNLEISRSTFDLLKNSYGVRKGCILEPIYSTSVLNRGYIELPPKP
LSPESQLMATFATKNTSGIILMGLSKGAEKRRRRQAHLPFFSIILVNGHLAVHVNAGDRA
STRKVLVAPDNGTYSDGQEHSVILTRNKRMITVQVDESSPAEIRLGPLAETRPMNISHLF
IGGIPAGEGISGLKMNDSFYGCISNLIFNMEFLDFTTAMRYEGVDMGSCFLWEKPKPAIH
VEDTEILSEMQMLPVSLQPLAEIKEKPCAEGETLNYVSWAYQFGLSRNSHLVLLFNHSTV
RKKLSVQLNLRTFASNGLVYYMAHQKQIDYAALQLRGGKLYFSFDLGKGRAVAFHGAIVS
DGKWHTVKTEYTKKKGIIKVDGQEPVSVNVPGDGNTLDVDGKLYLGGLPFDYSAKNIGNV
THSIPACIGGITINNKEVNKDNPVSIFSVNKCYVAAQEGTFFDGSGFLALVKEGYKVRSD
VNITFEFRTTIANGVLLGISSAKVDAVGLELVNGKILFSVNNGAGRITATYAPKGTTSLC
DGQWHKLQANKSKHHIALTVDGNLVHTDNPHMHSTSADTNNPIYVGGYPADVKQNCLTSK
SSFRGCLRNLMLIKGQQAESFDFSEAFDLRGVFPHSCPGAER
NT seq
9309 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcccccctggacgctgctccggaccccggcaggcttccctcctcctcctcctc
ctcctcctgctgctgctgctcttctcctcctcgtcggaaggccagcttcgaggtttattt
cctgctattcttaatcttgctagcaatgctcacatcagtaccaatgctacctgtggtgaa
aagggtcctgagatgttttgtaaacttgtggagcatgttccaggacgacctctacgcaat
gcacagtgtcgaatatgtgaccacaatagttcaaatcctaaagaacaacaccctatctca
aatgctatagatggtactaataactggtggcaaagtcccagtattcagaatggaagagaa
tatcattgggtaaccatcactctggatctaagacaggtctttcaagttgcatatataatc
atcaaagctgctaatgctccccgacctggaaactggattttggaacgttctgtggatggc
actgaattcaggccctggcagtactatgcaattagtgacacagagtgcttaaccagatat
aatgtaacaccaagaattgggcctcctacatacaagagagatgatgaagtgatctgcact
tcctattattctaggctagtgcctcttgaacatggagagatccatacatcattgatcaat
ggaagacctagtgctgatgacccttcagagaaattattggcatttacttctgcacgatac
attcgtcttcagttgcaacgtataaggactcttaatgctgaccttatgacactgagccat
catgatcctaaagatgttgaccctattgttacaagaaggtattactattcaataaaagat
atctcagttggaggcatgtgcatttgctatggccatgctcgaagttgtcctttggataat
gaaacaaagaaactacagtgccagtgtgaacacaatacttgtggtgagagctgtaatgag
tgttgtcctggctatcaccaggcaccatggagaccaggaaccatttctgctggcaacaaa
tgtgagagatgtaactgtcaccacaaagcagaagactgttattatgatcagactgtggca
gatcaaaaaaaaagtataaacatttatggccagttcaaaggaggtggagtgtgtataaac
tgtacccagcacactactggaataaactgtgagatctgtactgatggatactacaggcca
cataaagtatctccctatgacaataatccttgccttccttgtgaatgtgatttatttgga
tcctttggttctgactgtgttaaggatgatgaccatgctgacccacagcatggtattcag
gctgggcaatgtcactgcaaggatggttatacaggagaaaaatgtgaccattgtgccttt
ggctataaaggttatccaaactgtgtgcattgtaactgtagcctggtgggtagcattaat
gatgacccatgcatcgaaccttgtctttgtaaagaaaatgtagaaggagagaactgtgac
cgctgcaaaccaggtttctataatctccaagaaaggaatcctcaaggttgtactgaatgt
ttctgttttggtgtttctgatgtctgtgaaagtcttccgtggcccattagccaggtatca
tctatggctggttggttggtgactgctccatatactttgaaaactgtagatcctgaggaa
agtcaattggatggacctcctcaaataattattaacaatattgcagttgcaaaaatgctg
aagtccccttattactggtctgcacctaaaccatatcttggaaataaactcacttcgttt
ggtggttatttgaagtataccgtgtcctatgacattccaatggatagtacagatagtgat
ttggtgtctaatgtggatgttattattcagggtaatggacaaatgttggctactcgagct
gaaggactgtctttacaaccatatgaagaatattccagttctgtgaagcttgtgtctgaa
aactttgttgattttaatactaagaagtcaatagatcgagacatattgatgaaagtttta
gcaaatgttactcatattctgcttcgggccagttacaacattgccaaaagggctgtatac
aggttggattctgtcattttggacactgcaaatgctaatcttgtagatccatcttcagct
gcagatgtagaatattgtgaatgtcctcaaggttatgctgggatttcttgtgagtcctgt
cttcctgggtactaccgagtagatggcatactctttggagggatttgcctgcaatgtgat
tgcaatggtcatgcaacagaatgtgatattcatggtgtttgtcttatttgtgaacacaac
actacaggtcattcttgtgatgagtgcctgcctgggttctatggatcacccaccaagggc
acagcagaggattgccagccatgtgcctgtccactgagaactcctacaaacaatttcagt
cctacctgttacttggaaagtagtggtgaagttatctgtgataaatgttctcctggatat
gcaggatccaagtgtgaaagatgtgcaaatgggtactatggtgatcctttggtcccagga
caatcatgtataccttgtgactgcaatggtaatgtagatatgatggaagatggctattgc
aactcgatcacaggagagtgcctaaagtgtactggtaatactgttggacatcactgtgaa
aggtgtgctgatggttattatggggatgctgtgatcaacaaagattgccatgcttgcaag
tgtaatatgaacagctctgtttccagcatctgccatcatgagactggtctatgccaatgc
aaaatgaacgtggtgggacaaagatgtgataagtgtttgtttggatattatggcttaagt
acaggacttggctgtcttccctgcaattgcagtaaagctggctcagttgctgaggattgt
aatgatgaaggacagtgtcgctgtgtgccaggagtggctggggagaagtgtgatcgttgc
gctcatggtttttatgcattccaggatggtggttgcacaccttgtaattgcactcataca
ctcaatgcttgtgatgaagattctggggaatgcatttgtcctcctcatactgaaggggaa
aagtgtgaactctgtgaagaaaacttctggggtcttgatccagagaaaggatgcaaggtt
tgcaattgcagtgatttagggtcagtcagtctccagtgtgaccagttgacagctcggtgc
gagtgtaagcatgggtatggaggagacaactgtgatgaatgtgccttgggatatagagac
tatccggattgtgttccttgtgactgcgatttacgtgggagcaaagcaaacacatgtgac
cagagtcaaggaatctgtaactgtgaggaagaaactggtgtgtgtgtgtgcaaggaaaat
gtgtttggcttgcactgcagtgaatgcaaaactgggacctttgcacttcatgccattaat
cctttgggatgcattccatgtttctgttctgggaggtcagaggtttgcacggaagtagaa
gactatgtgagagtttcactaaccctgactccacagcagagtgttatgtatgtggtttct
cagagtaacctcactggaactagcgaaggtgtattttcccagtatcccgatatcttaatg
gatgctacaatagtccgacaacacttgaatgcagagccattttactggaaactgccccat
cagttccagggagatcagctcatgacctatggtggaaaattgaagtattcagtagctttt
tatgctctggatggcatgggaacctcaaaccttgaaccacaaatcctgatgaaggggggt
cacaccagtaaatatgtcatctatgtggacatccctgctccagaaaatggagtaagacat
gatgaagaaatagtaatgatggagagtgcctggaaatatttcaattcagtttctgatgaa
tctgtctcacattctgacttcatgtcagtattgagcaatgttgaatacattctcataaag
gcatcatatggtcaaggattacaacaaagcagaattgcaaatgtctccatggacattgct
gtgaaagctgatgatgcacccttcactagagacacagcttttcatattgagaaatgcctg
tgccctgtaggttatgcaggactctcatgtcaggactgtgcaccaggatactacagggag
aaacatacaggtgtgcacttgaaatactcctcttgtatgccatgcgagtgcaacaaccac
agtgatacctgtgacccaaaaactggaaagtgtttggactgcaaagataatacagtaggt
gaccactgtagtctttgtgccccaggcttttacggtaaagtaattggatctgtcaatgat
tgttctctgtgtgcgtgtccaagaacaagccctgggagctttagttccacgtgcattttg
aaaggtgttaatgacttccactgtgatgcttgtatcattggatatgaagggcagtactgt
gaaaggtgttctccaacttactatggagatcctaagtcacctggtggcagctgtcagcag
tgtcattgtaacccagatggctctgtccacaataactgtgaccatatttctgggcaatgt
gtctgtaagcaaggtgtagcaggttggctatgtgatgagtgtgaaccaaggcacattctt
atggacaatgactgtatttcttgcgatgatgattgcacaggattgttgttaaatgatctg
gataatcttgaagaagccatatttttggtaaatctcactggtgctgtcctggcaccctat
ggagtactgtcagacttagaaaatacaacaaaacaatacaaggggtccttttgggttaaa
gaagaaccaagctactccctagaaattatgcatgaccgtcttgtatccttgtcaggtgat
gtagaccagctgcacaaagaatcaccaataatattgggaagaggaaaacatctcagcagt
gatacagaaaagactttaaagaagagtcaagagctggctatgtttatcagcacgttacag
gaaagtgttacagtactaatagaagtggcaacatctgtcaacgaaacactaggtactgat
ttcccattgtccaacagaacattacaagaattacaagatgagattcccaccatgttggat
gtaatgcgtggaaggcattttaaacatctgcaccaaaatagtactcttgaactgaaagct
gcagaaagattattagctcgaatccaaaaagaatattggagaccacaacaagagcttaag
gtcctgcaaaaaaacgtgaaacgtaccttatcagaccacagtaccagccttcaagaagcc
aagaatgttgtaaatgaagcaagcactaacatcaatgagactaaccgccttctttttctt
attaatagtaacctcaaggaatgcaataataaaaagagcagtattcaagaagatcagaaa
ctgtctgtagtgctgaccagagagggcaaagtacaggtggatgctgctgccaccattgct
aaacgtgtaattaactctacatctagtctagaaatccaccgggatggactgatgctatgg
aatgacaaactgagacaacatgtggataacctggtaaagcagatatccactcgaggagct
cttgatcttgtttacagaacagaagaccatgctgctagcttacagaggattgttcgtgca
ttggacaatggtctcttggatgttagaaatgtgtctctgaatgcaacaaatgcagtccat
gcttactccaccattaaaagtctaattgaaaatgctgagagcctggcaggtgatgcttat
aggactgtaactgaatcagtacctgtgtcaaaagaatcctttaattctactgagaaaaat
gttcttcagcctagctccaagttattaactgaagccaaaagcttgcacaagaagtatgaa
gggcttgtgtctggtttatatgacatgaacataagggtgggaaagtttaaagagcaagct
aatagaattgctaaacaattcaatgattcaatgctgcagctgaatgcattgccaaatgat
accagtgaaaatattcttgctgtaaaatttctggctgtgtctgctaatgtaacagctgtt
aatggtttaagccatactggatattttagtgaaaagttactgaacacttcatctgcattg
tctgaagttaatgagacgttgcaaaaaaccaatgaacttataatcgactcatcaaaagct
gcagcgtcagctgaaaaaaaagtgaatgaagttgaaatccaggctggtctcttatttggt
agactgaaacctctgaaagtgctggaagagaacctgagcagaaacatctctgaaataaaa
gagctcatcagccaggcccgcaaacaggcagcctctattaaagttgcagtgtctgccgaa
agagattgtattcgtgcttatcaaccccagatattatctactaattacaatacattaaca
ctgaatgttaaaacaactgaacctgataaccttctattctacttgggtagcagtggcaaa
attgatttcatggcagtggagatgcgacgtggtaaagtggctttcttgtgggacatgggt
tctggatctacaagactggaatatcctgactttcctataaataacaataaatggtacaaa
atacatgctacaaggtttggaaagactggcaccttaactgtagaggaaacaaactctctc
cagaagccttttatgagagcagccacctctccaggaacagctactgtactggatatagac
cattcatccctaatgtttattggtggtcttggggggcaaatcaagaagtcaccagcagtt
aaagtgacacattttaagggatgcatgggggaagcagtcttgaatggcaaatctgttgga
ctctggaactacttggaaagagagggcaaatgccgtggatgctttggaagtccacaggat
gaagacatttcattccattttgatggcagtggatattcagtggtggagaaggcattgcgt
tccactgtgacccaaataattgtatttttcagcactttttcacccaatgggctcttagta
tacctggcttctaatggcacaaaagatttcttgtctctagagcttgttgatggaaaagtt
aaactaatggttgatcttggttcaggttctcttactcttcaaacagaaagtcgctacaat
aatggaacatggtataaaatttccttcagtcgaaacaaaaaagaagggattttggcagtc
atggatgcttataacctcagttctaaagaaaccaaacaaggagaatctcctggtgtagcc
tctgatctgaatcgttctgatagggatcctatttacattgggggcctaccacgctcaagg
acagtaagaaaaggacttagtaccagaacatatgtgggctgtattaagaacttggaaata
tcccgttctacttttgatttgcttaaaaactcatatggtgtaaggaaaggctgcatcctg
gagcccatatacagcactagtgtcttaaatagaggttacattgagttgccacctaagccc
ctctcaccggagtcacaacttatggccacctttgctactaaaaacacaagtggcatcatc
cttatggggcttagcaaaggagcagaaaagcgaaggcgcaggcaagcccatctgcccttt
ttctccattatactggtcaatggtcatttggcagtgcacgttaatgctggcgacagagca
agtacaagaaaggtcttggttgcacctgataatggaacttacagtgatgggcaagaacat
tctgtcattctgactcgtaataagaggatgataacagtccaagtggatgagagtagccct
gcagaaatcagactcggccctttggcggaaactagaccaatgaatatatctcaccttttc
attggtggcattcctgctggagaaggcatttcagggctaaagatgaacgactctttctat
ggctgtataagtaatctgatatttaacatggagtttctggatttcacaactgcaatgagg
tatgaaggtgttgatatgggcagctgtttcctttgggaaaagcctaaacctgccatccat
gtagaagacacagagattctttctgaaatgcagatgctacctgtttctctacagcctctt
gctgaaattaaggaaaaaccatgcgcagagggtgaaacactaaattatgtctcctgggct
tatcagtttgggctttccagaaatagtcacttggtgctacttttcaatcactctacagta
agaaaaaagctttcagtgcagttgaacctcaggacctttgcttccaatggcctcgtatac
tacatggctcaccaaaagcagattgattatgcagcccttcagttacgaggagggaagctt
tatttttcatttgatcttggaaaaggacgggcagtagcttttcatggagcaatcgtcagt
gatggaaaatggcatacggtgaagacagagtatacaaaaaagaaaggtataatcaaagtt
gatgggcaggaacctgtgtctgtaaatgttccaggagatggaaacacactggatgttgat
gggaagctgtacttggggggtctaccctttgattactcagccaagaatattggaaatgtt
actcacagtatccctgcatgcattggtggaataaccattaataacaaagaagtgaacaaa
gacaacccagtttccattttttctgtgaacaaatgctacgttgcagcccaggaaggaacc
ttttttgatggaagtggttttcttgctcttgttaaggaaggttataaagtacggtctgat
gttaatatcacatttgagtttcgcacgactattgcaaatggagttcttcttggaatcagt
agtgctaaagtagatgctgttggactggagcttgtaaatgggaagattttattcagcgtt
aacaatggagctggcagaataacagctacatatgcaccaaaaggcacaaccagtctgtgc
gatggacagtggcacaaacttcaagcaaacaaaagcaaacatcatattgctctgacagtt
gatgggaacttggttcacactgataatccacatatgcactcaacctctgcagatacaaac
aaccccatttacgttggaggctatcctgctgatgtaaaacaaaattgcttgaccagtaag
agctcattccgagggtgtttgagaaacctcatgctgattaagggccaacaggcggaatct
tttgacttcagcgaagcctttgacctgcgtggagtctttccacattcctgccctggggct
gagcgctaa
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integrated database retrieval system
