Sceloporus undulatus (fence lizard): 121917427
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Entry
121917427 CDS
T07740
Name
(RefSeq) NPC intracellular cholesterol transporter 1-like
KO
K12385
Niemann-Pick C1 protein
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sund04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
121917427
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121917427
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sund02000
]
121917427
Transporters [BR:
sund02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
121917427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
Folate_rec
Motif
Other DBs
NCBI-GeneID:
121917427
NCBI-ProteinID:
XP_042299315
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MARQREQPRRRGSFGGLSLAFAFAAASFLALLPGPVFSDSCIWYGECGTASGDKRYNCEY
NGPALPLPKDGYDLVQELCPGLFFENVSLCCDVQQLHTLKNNMELPLQFLSRCPSCFYNL
MNLFCELTCSPHQSEFLNVTQTIPYVDPVTEKNKTSITELQYYIGETFSNAMYNACKDVE
APSSNVKALGLLCGKDPKECNATNWIQYMFSKDNGQTPFNMIPIFSDVPVHGMIPMNNAT
KGCNESVDDVTGPCSCQDCSIVCGPKPQPPPPPAPWLLLGLDAMYVIMWISYTGFLLVFF
GAVFGVWCYRKRHFVSEYTPIDSNIAYSVNSRQNTGEATWCERLGEKFENGLRVTFTSWG
AFCVRNPRPVILFSLVVIVMCCSGLMFMRLTTNPIDLWSSPSSQARKEKEYFDAHFGPFF
RVEQLIIQAPHTKPEIYSPYPSGDDVPFGPPLTKDILHQVLDLQNAVENIIAYYNNDTIM
LKDICLVPLSPYNNNCTILSVLNYFQNSHSVLDHSVGDEFYVFADYHSHFLYCVRAPASL
NDTTLLHDPCLGTFGGPIFPWLVMGGYDDENYNNATALVITFPVQNYYNDTDKLMKALAW
EKEFINFVKNYSNPNLTISFTAERSVEDEINRESNSDASTVVISYIVMFVYISIALGHIK
SAARFLVDSKISLGIAGILIVLSSVACSVGIFSYFGVPITLIVIEVIPFLVLAVGVDNIF
IIVQTYQRDERLQGETLDKQIGRILGDVAPSMFLSSFSETVAFSLAMLFSFQSCGIAVEF
CSHVVRAFTISTKGSRTERAQDALSHMGSSVFSGITLTKFGGIVVLAFSKSQIFQIFYFR
MYLAMVLLGATHGLIFLPVLLSYIGPSVNKAKVRAAQERNKGTEREKLLFF
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggcagagggagcagccccgcagacggggctctttcgggggcctcagcctcgcc
ttcgccttcgccgccgcctctttcctggcgcttcttcccggcccggtcttctcagactca
tgtatctggtatggtgaatgtggaactgcttctggagataaacgatacaattgtgaatat
aatggcccagcattgccattaccaaaggatggctatgacttggttcaggaactctgccca
ggacttttctttgagaatgttagcctttgctgtgatgtacagcagcttcatactttgaaa
aacaacatggaactccctctgcagtttctttccaggtgcccatcatgtttttataatttg
atgaacctgttctgtgaactaacctgcagtcctcatcaatcagaatttttgaatgttaca
cagacaataccatatgttgatccagttacagaaaagaacaaaaccagcatcacagagctg
cagtattacattggagaaacattttctaatgccatgtataatgcctgtaaagatgtggag
gctccatcaagcaatgttaaagcactgggactgctgtgtggaaaagatcctaaagaatgc
aatgcaactaactggattcagtatatgttcagcaaggataatggccagactcctttcaac
atgattccaatattttcagatgttcctgtccatgggatgattcctatgaacaatgctacc
aaaggctgcaatgagtctgtggatgatgtcacagggccctgcagttgtcaggactgctct
attgtctgtggccccaaaccacaaccccctccacctcctgctccttggcttttgcttggc
ttagatgcgatgtatgtcatcatgtggatctcctacacaggatttctacttgtctttttt
ggagcggtttttggagtctggtgttacaggaagagacactttgtttctgagtacacacct
attgacagcaacattgcctattctgttaactcacgccagaatactggagaagctacctgg
tgtgaaagacttggtgaaaagtttgagaatggtttaagagtcacattcacatcatgggga
gcattctgtgttcggaacccaaggcctgttattctcttctccctggttgttattgttatg
tgctgctcaggcctcatgtttatgagattaacgacaaatcctatagacctctggtcatcc
ccaagcagccaggctcgcaaagaaaaggaatattttgatgctcactttggacctttcttc
cgtgttgagcaacttattattcaggcccctcataccaagccagaaatttactctccatac
ccatcaggagatgatgttccttttggtcctccacttaccaaagatattttgcatcaggtg
ttagacttgcagaatgctgttgaaaatataattgcttattacaataatgacaccataatg
ctgaaggacatctgcctggttcccctttctccctacaataacaactgtactattttgagt
gttctcaactattttcagaacagccattctgtcctagatcatagtgttggtgatgaattt
tatgttttcgctgactaccactctcacttcttatattgtgtccgagctccagcatctttg
aatgacacaactctgcttcacgatccatgcttaggaacatttggtggtcctattttccca
tggctagtgatgggaggatatgatgatgagaattacaataatgctacagcccttgtgatc
acatttcctgtccaaaattactacaatgacacagataagctgatgaaagctctggcttgg
gagaaagagttcatcaattttgtgaaaaactacagcaacccaaatttaacaatttccttt
actgctgaacgtagtgttgaagatgaaataaaccgagaaagcaacagtgatgccagtact
gttgtaataagctatatagtcatgtttgtgtacatctccatagctctaggacacataaag
agcgctgcccgattcttggtggattcaaaaatttctttgggcattgcaggaatcctcatt
gtactaagttcagttgcatgttctgtgggtatcttcagctattttggagtgcccataaca
ctgattgttattgaagttattccgtttttggtgctggctgttggagtggacaatattttc
attattgttcaaacatatcagcgagatgaacgtcttcaaggtgaaactctagataaacaa
attggccgtattcttggtgatgtggctcctagcatgttcctttcgtcattttcagaaaca
gtggctttttccttagctatgctgttttctttccagagctgtggcattgctgttgaattc
tgtagccatgtggtaagagcattcacaatcagtacaaaaggatcccgaacagaacgcgca
caagatgcactgtcccacatgggaagctctgttttcagtggcattacactcacaaaattt
ggaggaatagtggtccttgcgttctcgaaatcccaaattttccagatcttctacttcagg
atgtacttagctatggtactacttggagcaacccatggattgatatttctacctgtcctg
cttagctacataggaccctctgtaaataaagctaaagtacgtgcagcacaagaaaggaac
aaaggtacagaaagagaaaaactcctgttcttctag
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