Sceloporus undulatus (fence lizard): 121917516
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Entry
121917516 CDS
T07740
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sund03041
]
121917516
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121917516
Spliceosome [BR:
sund03041
]
Complex C
Other components
Complex C specific factors
121917516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_19
Cas3-like_C_2
AAA_7
Motif
Other DBs
NCBI-GeneID:
121917516
NCBI-ProteinID:
XP_042299481
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MAAPVGPMKFWKPGTDGPGASLSEERQSPAESTSVSVIYNPYVSLSIEQQRQKLPVFKLR
NHILYLVENYQTLVIVGETGCGKSTQIPQYLMEAGWTAEGRVVGVTQPRRVACVSIAGRV
AEERGALLGHEVGYCIRFDDCTDPQTTRIKFLTDGMLVREMMADPLLTRYSVIMLDEAHE
RTLYTDIAIGLLKKVQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPSKDTSMILTVEG
RTFPVDVFYIQRRRLQWRRASGTFPRPLLHRPAGADFRRVLRGLGGIFMLFLPWNLSPPL
PPPQKGYGQTWQHLHALSPPPQKEMDSPVPDYVKSTVETVMKIHQTEGDGDILAFLTGQE
EVETVVSMLIEQARIFARTGMKKHLRVLPMYAGLPASEQMKVFERVSHNVRKVIVATNIA
ETSITINGISFVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRL
YTEEDFEKLPQSTIPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYA
LGGLDKYCRLTEPLGIRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFTIPP
NQKTQATREHRKFAVEEGDHLTMLNVYEAFIKHNKNSQWCQDHFLNYKGLVRATAVREQL
KKLLVKFKVPKKSCEGDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPTSVLY
AEKPPRWVVYNEVIQTSRYYMRDVTAIESAWLLELAPHFYQQGTVRTRHRLQTHLSLKAK
RTKVDDH
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtcggtccgatgaagttttggaaaccaggtacagatggaccaggtgcc
agtctctcagaggaaaggcagagtcctgctgaaagtactagtgtttcagtcatctacaac
ccatatgtttctctttctattgaacaacagaggcaaaagctaccagtttttaagctgaga
aatcacatcctttatctggtagaaaactatcaaacactggtgattgttggagaaacagga
tgtgggaaaagcactcagattccccagtatctaatggaagctggctggactgcagaaggt
cgagtagtgggagtaacacagcctcgcagagttgcatgtgtttcaattgcaggccgagta
gctgaggagaggggtgccttgctaggtcatgaagttgggtattgcatccgatttgatgat
tgtactgatccacagactacaaggatcaagttcctgactgatgggatgctagtgagggaa
atgatggctgacccattattaacaagatatagtgtaatcatgttggatgaagctcatgaa
agaacgttgtatacagacattgccattggtttgctaaaaaaggttcaaaagaaacgagga
gatcttcgtctaattgtagcatcggcaacactggatgcagagaaatttagggatttcttt
aatcaaaatgagacgagtgacccaagcaaagataccagcatgatccttactgtggaagga
cgaacatttccagtggatgtcttctacattcagaggcgcagacttcagtggaggagggct
tcgggaaccttcccccgtccccttttgcaccggccagctggagcagacttcagacgagtg
ctacggggactcggtggaatcttcatgcttttcctcccctggaatcttagtcctcccctt
ccccctccacagaagggatatgggcaaacctggcagcatcttcatgccctctctcctcct
ccacaaaaggagatggacagtcctgttccagattatgtgaaatcaactgtggaaactgtc
atgaaaattcatcagacagaaggtgatggggatattctggcatttttaactggccaggag
gaggtagaaactgttgtttcaatgctgatagaacaggcacggatctttgctcgcacagga
atgaagaaacacctgcgcgttcttcctatgtatgcagggttacctgcttctgaacagatg
aaagtgtttgagagagtatctcataatgttagaaaggttatagtggccactaatattgca
gaaacatctattacaatcaatggcatttcatttgtgattgactgtggttttgtgaagctc
cgtgcatataatccaaaaacagcaattgaatgccttgtggttgttccagtatcgaaggcc
tcagcgaatcagagggcaggtcgggcaggtcgaaaccgttcaggaaaatgctacagactt
tatacagaggaagattttgagaagttgccacaatccactattcctgagatgcagcgcagt
aacctagcaccagtcattctccagctgaaagctttaggaattgacaatgtgctcaggttt
cctttcctctcacctccacctgctcagtcaatggtgcaagctttggagctactctatgca
ttaggagggcttgataaatattgccgtctcactgaacctcttggaattaggatagcagaa
ttccctttgaatcccatgtttgctaagatgctcctagaatcagggaattttggttgctcc
caggagattctgagcattgctgccatgatgcagatccagaacatctttacaattcctcca
aaccagaagacacaagctaccagagaacacagaaaatttgctgttgaagagggtgaccat
ctcactatgcttaatgtctatgaagcttttatcaaacacaacaagaattctcagtggtgc
caagatcattttttaaactacaaaggcctcgtcagagccacagctgtcagagaacagctg
aaaaaacttcttgtcaagttcaaagtaccaaaaaaatcctgtgaaggtgatccagatcct
gttctaaggtgcatagtttctggattctttgctaacgcagccaggtttcactctacaggg
gcctacaggactattcgtgatgaccatgaacttcatatccatcccacctcagtgctgtat
gcggagaagccccctcgttgggtagtatacaatgaagtcatacagacctcaagatactac
atgcgagatgtaacagctattgaatctgcttggctgttggaactggctcctcacttctac
cagcaaggaacggtacggactcgacatagactccaaacgcacctttccctgaaagccaaa
aggactaaagttgatgaccattga
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