Sceloporus undulatus (fence lizard): 121918468
Help
Entry
121918468 CDS
T07740
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sund04121
]
121918468
Enzymes [BR:
sund01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121918468
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121918468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
Phytase-like
Motif
Other DBs
NCBI-GeneID:
121918468
NCBI-ProteinID:
XP_042300450
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
VGGLKTNFFINGLLDLVRPAGKAPPTCTLCPLIGQEAAQPAASRCLDCADDMCRSCARGH
RCSRLTHTHRVVDMEGYLSGRYDQEIRERQAAQCKEHPGEALRFFCTPCAAPLCRECRLG
PHLQHPCRTLAEAAEESRPVVEGLLVGVEDAVGRLAQRRASLEAAAEALEARQARIRAQV
EQACAQAVERLLVHQKEVLARLSDFMEERRKAWAAQQSELELQEQVASSMATFARRVLIL
GREAEVLSLEQMISERLKGLQGGFSWEPPSPRLPRLEIQPELEGSHNPFCLEFLEAKEEE
EEEKEEGQEEEEASRSAKKRRKKKPQQQQAQSGEEGLRTPCQEKLPSEQTAPPPQEAPAP
PPAXPDPPQLSPRPLFSCSFWVKIPTDKRRPQVTGLCPFGSGELLVADEQNRRLKRFSLQ
GGEFKGTVPVPGDVAPFSVAALGTKVAFTAGSELYLLDGKGGLAWKKALQRGQASHAVVS
VGGDRLAVSVAGHLEVYDLEGRLVEKVWPEGTAERCLVFLAGRKGGFAGSDWYRRSVVLF
TESGEMVTECREEKLGGCHPGAVCADPLGIVYVVLRELNKVVALSPAGEVLGTFLAAENG
IDRPRVATVAREGRFVVALSNGTIHVFKIRYQGK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtgggtggcctcaagaccaacttcttcatcaatggtctccttgacctcgtccgccctgca
gggaaggcacccccaacctgcactttgtgcccactcatcggccaggaggccgcccagcct
gctgcctcacgttgcctggactgtgcggatgacatgtgtcggtcgtgcgcccgcggccac
cgctgctcccggctaacccacacgcaccgggtggtggatatggagggctacctctcgggc
cgctacgaccaggagatccgggagcgccaggctgcccagtgcaaggagcacccaggggaa
gcgctgcggttcttctgcaccccctgtgcagcccccctttgccgggagtgccgcctcggc
ccacacctgcagcatccgtgccggaccttggccgaagcagccgaggagagccgcccagtg
gtcgaagggctcttggtgggagtggaagatgcggtgggacgcctggcccagaggagggcc
agcctggaggcagcagcggaggcgctggaggcgcgtcaggccaggatccgggcccaggtg
gagcaggcctgcgctcaggcggtggagcggctgctggtccaccagaaggaggtgctggcc
cggctttcggacttcatggaggagcggaggaaggcctgggcagcgcagcagtcggagctg
gagctgcaggagcaggtggcatccagcatggcgacctttgcccggagggtcttgatcctg
ggtcgggaggcagaagtcctctccctggagcagatgatctcagagcggctgaaagggctg
caggggggcttctcctgggaacctccaagcccccggctgccccggctggagatccaaccg
gagctggagggcagccataaccccttctgcctggaattcctggaggcaaaagaggaggag
gaggaggagaaggaggaaggacaggaagaagaggaggccagcagatcagcaaagaagaga
aggaagaagaagccacagcagcagcaggcccagagcggggaagagggcctcaggaccccc
tgccaagagaagctccccagcgaacagactgccccccccccccaggaagcccccgcaccc
ccccccgccnncccggatcccccccagctcagccccaggcccctcttctcctgcagcttc
tgggtgaagatccccacagacaagcggcggccccaggtgaccggcctctgcccctttggc
tctggggagctgctggtggccgacgaacagaaccggcggctgaagcgcttttcccttcaa
gggggggagtttaaggggactgtgccggtgcctggagacgtggcccccttcagcgtggct
gccctgggcaccaaagtggccttcacggctggttcagagctctacctcctggatgggaag
ggcggcctggcatggaagaaggccctccagagggggcaggcgagccatgctgtggtatct
gtggggggcgaccgcctggcggtgagcgtggccggacacctggaagtctatgatctggaa
gggcggctggtggagaaggtctggccagagggcacagctgagcgctgcctggtcttccta
gctgggcgcaaggggggctttgcagggtctgactggtaccgacgcagcgtggtgctcttc
acggagagcggggaaatggtgaccgagtgccgggaggagaagctgggggggtgccatccg
ggggccgtgtgtgctgaccccctgggcattgtctatgtggtcttgcgggagctgaataag
gtggtggcactttctccggctggagaggtgctggggaccttcctggcagctgaaaatggc
attgaccggccccgggtggccactgtggccagggaagggcgctttgtggtggccctgagc
aatgggaccatccatgtctttaagattaggtatcagggcaagtga
DBGET
integrated database retrieval system
