Sceloporus undulatus (fence lizard): 121918957
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Entry
121918957 CDS
T07740
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121918957 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sund04812
]
121918957 (CLASP1)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121918957 (CLASP1)
Cytoskeleton proteins [BR:
sund04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
121918957 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
CEP104-like_TOG
TOR1L1_N
HEAT_EZ
Sec7-like_HUS
HEAT_2
Cnd1
RTP1_C1
HEAT_DAAF5
Dopey_N
MMS19_C
KH_DEAH11_1st
TAN
ParcG
Motif
Other DBs
NCBI-GeneID:
121918957
NCBI-ProteinID:
XP_042300977
LinkDB
All DBs
Position
1:241061666..241310846
Genome browser
AA seq
1609 aa
AA seq
DB search
MEPTMEYCLVQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKMVDGLATSWVN
SSNYKVVLLGLDILSALVSRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQALLLKIME
QAASPQYVWDRILGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNIIFTKFDEVQKSGTMIQGSGDKN
FDDDDSVDGNRPSSASSSTSSKAPSSARKGGVGTTRRVGTAALISKTPATKEGAGAVDEE
DFIKAFEDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVAALKKIRSLLLAGAADYD
TFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVVAETIKKGIHDADSEARIKARKCYWGFHSHFSREAEHLFNSLESSYQKALQSDL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSAKSVSTSGSLQRSRS
DIDVNAAASAKSKVTSSGSDIPFSSAAALPPGSYASLDGTTNKAEGRIRTRRQSSGSATS
ITSTPADTRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSAYGGLSSGSSRGHPVP
SSADKRSKVPRSQGCSRETSPNRIGLARSSRIPRPSVSQGCSRDTSRESSRDTSPARGFP
PLASRRHSRSTSALSTADSVGQSDRFGLGQPGRLPASMNAMRVLSTSTDLEAAVADALLL
GDSRSKKKPVRRRYEPYGMYSDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLN
HCASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLV
DFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRF
IVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSEAKLAVSRIITWTTEPKSSDVRKT
MHSWVGEDMPARSTTASSGPGEGNLEEKCKQAAQIVLISLFELNTPEFTMLLGALPKTFQ
DGATRLLHNHLKNSSNTSVGSPSNTVGRTPSRHPSSRTSPLTSPTNCSHGGLSPSRFWGW
SADGLSKHPPPLFQPNSIPAAPPHKTFRRSYSPSMLDYDTENLNSDEIYSSLRGVTEAIE
KFSFRSQEDLNEPIKRDGKKDSDIVSRDGGIASPATDMRGSSDVVEGGRMALDNKTSLLN
TQPPRAFSGPRTREYNPYPYSDTISSYDKTALKEAVFDDDIDQLRDVPIDHSDLVADLLK
ELSNHNERVEERKGALLELLKITREDNLGVWEEHFKTILLLLLETLGDKDYSIRALALRV
LREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCP
IIQTADYPINLAAIKMQTKVIERISKESLHQLLQDIIPGLLQGYDNTESSVRKASVFCLV
AIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atggagcccacaatggagtattgtttggttcaggttctgcaaaaggatgttggaaagaga
cttcaggttggccaagaactgatagactatttctcagataaacagaaatctgctgatctt
gaacatgatcagaccatgctggataaaatggttgatggtcttgctacctcctgggtaaat
tccagtaattataaggttgtcctgctgggcctggacatcttatctgcactggtgtcacgc
ctccaagataggtttaaagcccaaattggcacagtgttgcctagtttaattgacagattg
ggagatgcaaaagactcagtaagagaacaggatcaggcactgctgctaaaaatcatggag
caagctgctagtcctcagtatgtatgggacaggattttgggaggattcaaacacaagaat
ttccggacaagagaaggaatttgcctctgccttattgcaacgctcaatgcatctggagct
cagagtttaacactgagcaagattgtgccacatatatgtaatttacttggagatccaaac
agccaggttcgcgatgcagcaataaatagcttagtagaaatctacagacatgtaggtgaa
cgtgtaagagccgatctcagcaaaaaaggattgccacagtctcggttgaacattatcttt
acaaaatttgacgaggttcagaaatcaggaaccatgatccagggatcaggtgataaaaat
tttgatgatgacgactctgtggatgggaacaggccttcctcagccagctcctcaacgtct
tcaaaggcaccttcatctgcgcgaaaaggtggagtggggactacccggagggttggaaca
gcagctctaatctcaaaaactccagcaactaaagaaggggctggagctgttgatgaagag
gacttcattaaagcttttgaagatgtcccaacagttcagatttattctagccgagacctt
gaagaatccataaacaaaatcagagaaatcctgtcagatgataaacatgattgggaacaa
agagtagcagcactaaaaaagatccgatctttattattggctggagctgctgactatgat
acctttttccaacacttgcgtctgcttgatggagcatttaagttatctgctaaagatttg
cggtcccaggtagtgagagaggcttgcatcacattggggcatttgtcgtcggtcctgggt
aacaagtttgaccatggggcagaagccatcatgccaaccatttttaatctcattcccaac
agtgccaaagtcatggccacctctggtgtagtagctgttagattaattattcgacatacg
cacatccctcgactaattcccataatcaccagtaactgtacctccaaatctgttgctgtt
agaaggcgctgttttgaatttttagatttacttttacaagaatggcaaacacactcctta
gaaaggcacatatcagtagtggctgaaacaataaagaagggaatccatgacgctgactct
gaggcacggataaaagccagaaaatgttactggggcttccacagccattttagtcgagaa
gcagaacatttgtttaattcattggaatcttcataccagaaggctctacagtctgacttg
aagaactctgatagcattgtgtccttgcctcaatcagatcgctcctcttccagctcccag
gagagtctcaatcgtccactgtctgccaaaagaagtccaacaggaagcacaacatcacga
gcttctacagtaagtgcaaaatctgtgtcaacatctgggtctctccagcggtctcgcagt
gacattgatgtgaatgcagcagccagtgccaaatcaaaagtaacatcttccggatcagac
atccccttcagctctgctgcagctctgccccccggctcatatgcatctctagatggtact
accaataaagcagagggccggattcgcacaaggaggcaaagctctggaagtgccactagt
atcacctcaacgcctgctgacactcgcggccgaagccgggctaaagtagtttcacaatcc
cagcgatccagatcagctaaccctgctggtgctgggagtcgatccagctccccagggaag
ttgttaggaagtgcatacggtggactgagcagtggatcgtccagaggacacccagtgcca
tcatcagctgacaaacgcagcaaagtccctcgaagccaaggatgcagccgagagaccagc
ccaaacaggataggtctagcacggagcagccgtatcccccgacccagcgtgagtcagggg
tgcagccgcgataccagccgtgagagcagccgagatacaagccctgctcggggcttccct
ccacttgcctctcgacgtcattccaggtccactagtgctctctccactgctgattctgtt
gggcagtcagaccggtttgggcttggacagccaggcaggttgcctgcctcgatgaatgca
atgcgagttctcagtacaagcacagatctggaggctgccgtggcagatgcactgctttta
ggagactccaggagcaagaaaaaaccagtgagacgaaggtatgaaccatatgggatgtat
tctgatgatgatgcaaacagcgatgcttcaagtgcttgctcagagcgttcctacggttcc
cgcaatggaggcatcccccactacttacggcagacagaggatgtggctgaggtcttaaat
cactgtgctagttccaactggtctgaaaggaaagaagggctaataggccttcagaattta
ctgaagagccaacggacactgagtcgagttgagttgaaaaggctgtgtgagatcttcacg
cgcatgtttgcagacccccacagcaagagagttttcagcatgtttcttgaaaccctggta
gatttcatcattattcacaaggatgatttgcaggattggctctttgtccttctgacccag
ttactcaagaagatgggtgctgatttgctggggtcagtgcaggcaaaagtgcagaaagct
ctggatgtaacaagggattctttcccctttgatcagcagtttaatattttgatgagattt
attgtagatcaaactcaaacaccaaaccttaaggtaaaagtggcaatcctgaagtacatt
gaatccttggccagacagatggaccctacagattttgtaaactccagtgaggcaaaactt
gcagtttctaggattattacctggacaacagaaccaaagagctcagatgtgagaaagacc
atgcatagttgggtaggtgaggatatgccagctagatcaacaacagcctcgtcaggtcct
ggtgaaggaaacttggaagagaagtgtaaacaggcagcacaaattgtcctgatttctctg
tttgaattaaacactcctgagtttactatgttacttggtgccttgccaaaaacattccag
gatggtgctaccaggctactacacaaccacctcaagaactccagtaacactagtgtgggt
tcccctagcaatactgttggccgaactccttcacgtcatcctagcagcagaactagcccc
ttaacttcacctaccaactgttctcatggaggcttgtctccaagtcgtttctggggttgg
agtgcagatgggctctcgaagcacccccctcccctttttcagcctaactccatccccgct
gctcctcctcacaagactttcaggcgttcttattctcccagcatgctggattacgacaca
gagaacctaaattctgatgaaatttatagctctcttcgtggagtcacagaagcaattgaa
aagtttagcttccgtagtcaagaggatctaaatgaaccaatcaaacgtgatggaaagaag
gacagtgacattgtttctcgggatggtggaatagcatcaccagcaactgatatgcgtgga
agcagtgatgttgtagaaggaggaaggatggctttagacaataaaacttccctacttaac
actcagcccccacgtgccttttcaggaccccgaactcgagagtataacccctacccgtac
tcagatactatcagctcctatgacaaaactgctctcaaggaggctgtgtttgatgacgat
attgatcagcttcgggatgtgcccattgatcattctgatttggtggctgatcttttaaaa
gaattatccaatcacaatgagcgggtggaagaacggaaaggagcccttcttgagctgttg
aagattacaagggaagataacctgggagtttgggaagaacatttcaagaccattttgctt
ttattgcttgaaacacttggagacaaagattattcaataagagctctggcgttaagagtg
ttgcgagaaatcttgaggaaccagcctgcaagatttaagaattatgctgaactcactatc
atgaagaccctggaagcacataaggattctcacaaagaggttgtgagagctgctgaagaa
gctgcttccactctggccagctccatccaccctgaacaatgcatcaaagtgctttgcccc
atcattcaaacagctgactacccaattaatctggctgctattaaaatgcagaccaaagtc
attgagagaatctcaaaggaatctttgcatcaactccttcaagatatcatccctgggctg
ttgcagggctatgacaacacagaaagcagtgtccgcaaagccagtgtattctgccttgtg
gcaatctattcagttattggtgaagaactgaagcctcaccttgcacagctcactgggagc
aagatgaaactcctgaatttgtacataaagagggcccagaccaccaacagcaacagcagc
tcatcttcagacgtttccacacacagttaa
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integrated database retrieval system
