Sceloporus undulatus (fence lizard): 121919073
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Entry
121919073 CDS
T07740
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X1
KO
K27396
protein Smaug
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121919073 (SAMD4A)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121919073 (SAMD4A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
121919073
NCBI-ProteinID:
XP_042301222
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All DBs
Position
1:complement(376103164..376243476)
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AA seq
708 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSRSQARFLQLCLEHSLADCTELHVLEN
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNVEAKGEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSLGTFGSQTRGRSDSVDYGQSHYYHQ
RQNSDDKLNGWQSSRDSGICVNASNWQEKSLGCENGHLPLYSSSSVPATINTIGTGTGTI
LSSQTHHSPLKRSVSLTPPMTVPNQPLGHGWMSHEDLRARGPPGLPSDHAPLSPQSSVAS
SGSGGSEHLEDQTSARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYDEMMALTECQ
LEAQNVTKGARHKIVISIQKLKERQNLLKSLERDILEGGNLRVPLQELHQMILTPIKAYS
SRNLTGDEHCRDSEPHRPTSLIGSDSQGSDCKDSASGGMHHHHSHLPGCEGESGGAPLPE
GDIPGQFTKVMGKVCTQLLVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQ
KLFRSFPRKTILDLSGYRQQRTRGFGQSNSLPTAGSVGTGMGRRNPRQFQIPSRNLPTSR
LGLLGPTSLLGATQRNAAANPAILKQGRQNLWFANPGGSNSMPSRSHSSVQRTRSLPVHT
SPQTMLMFQQPEFQVPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgagaccaggtcggagtgctggcaggttggttcaaaggctggaacgagtgt
gagcagacagtggccctgctctctttgttgaaacgggtgagccggagtcaagcccgtttc
ctccaactctgccttgagcattccttggctgactgcacagaactgcacgttctggaaaat
gaagccaacagccctggaatcattaaccagtggcaacaggaatcaaaggacaaagtgatt
tctttattgttaactcacctgcctttgctgaagcctgggaacgtggaagccaagggggag
tacatgaagttgctccctaaaatcttggctcactcgatcgaacacaaccaacatatagag
gagagccggcagctcctgtcctacgccttgatccacccagccacgtctctggaggacagg
agcgccctggccatgtggctgaaccacttggaggatcgcacctccttgggcaccttcggc
agccaaaccagaggccgctccgattctgtggattatgggcagtcgcactactatcaccaa
agacagaactcagatgacaagctgaacgggtggcagagctcccgggactctgggatctgt
gtgaacgcttccaactggcaggagaaaagcctggggtgtgagaatggccacctacccctc
tactcctcctcctccgtccctgccaccatcaacacgatcgggactggcacgggcacaatt
ctctcgagccagacccaccacagccctttgaaacggtctgtatcccttaccccgcccatg
actgtgcccaaccaacctctaggacacggatggatgtctcatgaggatttgcgagctaga
ggaccaccaggcctcccttccgaccatgcccccctgtctcctcaaagcagtgtagcctct
tcgggaagtggtgggagtgaacacttagaagatcagacttctgctcgtaacacattccag
gaggaagggagtggtatgaaagatgttcctgcctggctcaaaagtttgcgcctccacaaa
tatgctgcccttttctcccagatgacgtatgatgaaatgatggccctgacagagtgtcag
cttgaggctcaaaatgttaccaaaggcgcaaggcacaaaattgtgatcagtatccaaaag
ctaaaagagaggcagaaccttctcaagtccttggaaagggacatcctcgaagggggcaat
ctccgtgtccctttgcaggagcttcaccaaatgatcctcaccccaatcaaagcttactct
tctcggaacttgacaggggatgagcactgccgggattcagagccccatcgcccaacttct
ttgatcggctccgacagccaagggtccgactgcaaggactctgcctctggagggatgcat
caccatcactctcacttgccaggctgcgagggagaatctggtggggcccctctgccagaa
ggcgatatcccgggacagttcactaaggtgatggggaaagtgtgtacccaactccttgtc
tccagaccagatgaggagaatataagttcctatctacagctcatcgacaaatgcctaatt
catgaggcgtttacagagacgcagaagaaaaggctgttgtcatggaaacaacaggtgcaa
aaactcttcaggtctttcccgcggaaaaccatcctagacctctcgggatatcgacagcaa
agaacccgaggttttggccagtcgaactccttaccgacagctggatctgtaggtacagga
atgggtcggcggaacccacgccagttccaaatcccttcccggaacctccccacctcgcgg
ctgggccttctgggccccaccagcctcctgggagccacccagcgcaacgcagctgccaat
cccgccatcctgaaacaaggaagacagaacctttggtttgcaaaccctggaggaagtaac
agcatgcctagccggagtcacagctcggtccagaggacgcgctcattgccggtccacacc
tctcctcaaacaatgcttatgttccagcagccagagttccaggtaccagtgacagaacct
gatatcaataacaggctggagtccttgtgcctcagtatgactgaacatgccctgggagat
ggcgtggacaggacctcgacaatctag
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