Sceloporus undulatus (fence lizard): 121919122
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Entry
121919122 CDS
T07740
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121919122 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sund04812
]
121919122 (SPTBN1)
Cytoskeleton proteins [BR:
sund04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121919122 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
121919122 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
SLATT_6
Motif
Other DBs
NCBI-GeneID:
121919122
NCBI-ProteinID:
XP_042301313
LinkDB
All DBs
Position
1:complement(15152680..15352912)
Genome browser
AA seq
2365 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYKELCQLSAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSIVRLLSKHKAFEDEMSGQSSHFQQAIKEGEDMIAEDHFGSEKIRERIA
DIQNQWANLEQLSAFRKKRLEEASLLHQFQADADDIDTWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIASYRSIIDSLHEQARALPQEHAESTDVQSRLAGIEERYKEVAELTKL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMEIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLIHNGHPNEKEIKAQQDKLNTRWSQFRELVDIKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQELGNDLAGVIALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQARAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
HQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHKKN
REVASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLIAEKPETEAIVKEKLTSLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKTTGEGGGGRGMLENQIDVR
KKEIEELKSQAQALSQEGKSTDEVDGQRLIVEKKFVELLEPLNERKSHLLASKEIHQFNR
DVEDEILWVGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIV
TDSSLNAEAIQQRLADLQQLWNLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQEL
YMMSEEKAKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQ
SKVDKLYAGLKDLSEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHV
TMLQERFREFARDTGNIGQERVDAVNHMADELINSGHSDAATIAEWKDGLNEAWADLLEL
IDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDI
QALGTQVRQLQEDAARLQSAYAGDKADDIQKRENEVLDAWKALLDACEGRRVRLVDTGDK
FRFFSMVRDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIEL
GKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWL
LGQEPYLSSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEE
EERKRQPPSPEPKTGEESQQWDGTKGEQISQNGLPPDQESPRMGETREASEMVNGAAEQR
TSSKETSPVPSPTADRKAKPGLQAQTAATLPAKTQETPPAQMEGFLHRKHEWESHSKKAS
NRSWHNVYCVINNQEMGFYKDAKAASSGIPYHSEIPVSLKEAVCEVAVEYKKKKHVFKLR
LTDGNEYLFQAKDDEEMNTWIQAITSAISSDKIELSTSTQSTPATSRAQTLPASVTITSE
SSPGKREKEKEKDKEKRFSLFGKKK
NT seq
7098 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaccgtagcgacagactatgacaatattgaaatccaacagcaatacagtgat
gtcaacaaccggtgggacgttgatgactgggacaatgagaacagttctgcacgattgttt
gaaaggtctcgtattaaagctttagcagatgaacgagaggcagtccagaagaagacattc
actaaatgggttaactctcacctggcacgtgtgtcctgtagaattacagacttatacact
gatcttcgtgatggacggatgctgatcaaactgctggaagttctttcaggagagagactt
cccaagccaacaaagggaagaatgcgcatccactgcttggaaaatgttgacaaagccctc
cagtttctgaaagaacagcgagtacatcttgaaaacatgggatcccatgatattgtggat
gggaatcacagactaactcttggccttatttggactattatattgcgattccagattcag
gatatcagtgttgaaacggaagacaacaaagagaagaagtctgctaaagatgcactactg
ctgtggtgccagatgaagacagctggctatcccaacgtcaacattcacaacttcaccacc
agctggagggatggcatggctttcaacgcactaatccacaaacacaggcccgatctaatt
gattttgataagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaaccta
gcagagcaacaccttggccttactaaactgttggacccagaagatatcagtgttgaccat
cctgatgaaaagtccattatcacctatgtggtgacatattaccactacttttcaaagatg
aaagctttagctgttgaaggaaagcgtattggaaaggtgcttgacaatgcaattgaaaca
gagaagatgatagaaaaatatgagtccctggcttctgatctccttgagtggattgagcaa
accatcatcatcctgaacaaccgcaaatttgccaactcactggttggagtgcaacagcag
ctacaagcattcaacacctaccgcacagtagagaagccacccaaattcacagagaaagga
aacctggaagtcctgcttttcactattcagagcaaaatgagagctaacaatcagaaagtg
tacatgcccagggaagggaaactcatctcagatatcaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgtaatgagctcatccgacaggagaaactg
gaacaacttgcccgcagatttgaccgcaaggcagctatgagagagacgtggctgagtgaa
aaccagcgtctggtttctcaggataactttgggtttgacctcccggctgtggaggctgcc
acgaaaaagcatgaagctattgagacagacattgcggcctatgaggaaagggtccaggca
gtggttgctgttgccagggagcttgaagctgagaattaccatgacatcaagcgcatcact
gcaaggaaagataatgtgatccgtctatgggagtacctcctggaactgctcagggcacgc
cggcaacgactggagatgaaccttggtctgcagaagatcttccaggaaatgctgtacatt
atggactggatggatgagatgaaggtgttgctgctgtctcaagactatggcaaacatctc
ctgggggtagaagacttattgcagaaacatgcacttgttgaggctgacattgccattcag
gctgagagagtgagaggagtcaatgcatctgctcagaaatttgccacagatggagagggt
tacaaaccatgtgacccacaagttatcagagaccgtgtggctcacatggagttttgttac
aaggagttatgtcagttatcagctgaacgcagagctcgcttggaagaatctcggcgctta
tggaagttcttctgggaaatggctgaagaggagggatggataagagaaaaggagcagatc
ttgtcatcagatgactatggaaaagacttaaccagcattgtccggcttctcagcaagcat
aaggcatttgaagacgagatgagtggtcaaagcagccacttccaacaggcaatcaaagaa
ggggaagatatgattgctgaggatcactttgggtctgagaagatcagagaaaggattgca
gacatccagaatcagtgggctaacctggaacagctgtctgccttccggaagaagcgcctg
gaagaagcatccctccttcaccaattccaagctgatgcagatgacattgacacatggatg
ttggatatcctcaaaattgtctccagcagtgatgttggccatgatgaatattccactcag
tccttggttaagaaacacaaagatgtggctgaagagattgcaagctacaggtcgattatt
gattctcttcatgaacaagccagagccttgccacaggaacatgcagagtcaacagatgtg
cagagcaggttggcaggaatagaggagaggtacaaagaagttgctgaactcacaaagctt
cgtaagcaggccctgcaggacactttggcactgtacaaaatgttcagtgaggcagatgct
tgcgagctttggattgatgagaaggaacaatggctgaacaacatggagatccctgagaaa
ctagaagatctggaagtgatccagcacagatttgaaagtttagaaccagaaatgaacaat
caagcatcacgtgttgctgtggttaaccagattgctagacaactaatacacaatggacat
ccaaatgaaaaagagatcaaagcacagcaagataagctgaatacaaggtggagtcagttc
agagaactggtagacataaagaaggatgctcttctctccgctctcagtatccagaactat
caccttgaatgtaatgaaactaaatcttggatcagggagaagactaaagttattgaatct
acccaagagcttgggaatgacctggctggggttatcgcgcttcagaggaaactgacagga
atggaacgtgacttggttgctattgaggccaaactaagtgacctccagaaagaggctgaa
aagttagagtcggagcatccagaccaagctcgggccatactgtccaggcttgctgaaatc
aacgatgtttgggaagaaatgaaaacgaccctgaagaatcgtgaagagtcccttggagag
gccagcaagctgcaacagttcttacgtgacttggatgacttccagtcctggctctcccgg
acccagactgccattgcctcggaagacatgccgaatacactgacagaggcagagaaactg
cttacacagcatgagaatattaagaatgaaatcaacaattatgaggaagactatcagaaa
atgagagacatgggtgagatggtcacacaaggacagacagatgctcaatacatgttcttg
caccagcgcctgcaagccttggacactggatggaatgagctgcacaaaatgtgggagaat
cggcagaatcttctctcccaatcccatgcctaccagctgttcctcagagacacaaagcaa
gcagaagcctttcttaacaaccaggaatatgttttggctcatactgaaatgcccacgact
ttggaaggagcagaagctgctatcaaaaaacaggaggatttcatgactacaatggatgcc
aatgaggagaagatcaatgctgttgtagagactggaagaagactagtcagtgatggaaac
atcaactctgacaagatccaagagaaagtggattccattgatgacagacataagaagaat
cgtgaggtggccagtgaacttttgatgagattgaaagacaacagagatcttcaaaagttt
cttcaggattgccaagagctatccctctggattaatgagaagatgcttacagcccaggac
atgtcttatgatgaagcaaggaacctgcacagcaagtggctaaaacaccaggccttcatg
gcagagctagcttctaacaaagaatggctggacaaaattgaaaaggaaggaatgcagctt
attgccgagaaacctgaaacggaagcaatagtaaaagagaagcttaccagtctgcaccag
atgtgggaagagcttgaaagcaccacccagactaaagctcagcggcttttcgatgccaac
aaggctgagctcttcactcagagttgtgctgacttggacaagtggctgaacggcttggag
agccagatacagtcggatgactatggcaaggacctcaccagcgtcaatattctgctgaaa
aaaacaacaggggagggggggggggggagggggatgcttgaaaaccaaatagatgttcgt
aagaaggagattgaggaactgaagagccaagcccaagcattgagccaggaaggcaagagc
acagatgaggtggatggccaacgtcttattgtagagaagaagtttgtggagttgctggaa
cccttgaatgagaggaagtcccacctcttggcttccaaagagatccatcagttcaaccga
gatgtggaggatgaaattttgtgggttggagagagaatgcctattgccacttctacagat
catggtcacaacctgcagactgttcagctgttaattaagaagaatcagacacttcagaag
gaaatccagggacaccagcctcggattgacgacatttttgagaggagccaaaacattgtt
acagacagcagccttaatgccgaagcaatccagcagcggcttgcagacttgcagcagctg
tggaatctcctgatagaggagacggagaaacgccacaagcgccttgaggagtcccacaaa
gctcagcagtactactttgatgctgcagaggccgaagcctggatgagtgaacaggagctc
tacatgatgtcagaagagaaggccaaggatgaacaaagtgctgtctccatgctgaagaaa
catcagattttggagcaggccgtagaagattatgctgagactgtgcaccagctttccaag
accagcaggactttggtagcagacaatcatccagagagcgaacgcatcagcatgcggcag
tcaaaggtggacaagctttatgcaggcttgaaggacctttctgaagaaaggagaggcaag
ctggatgagaggcacaggctcttccagctcaaccgtgaagtagatgacttggaacagtgg
atcgcagaaagggaagtggtggctgggtcccacgaactgggacaggattacgaacacgtg
acaatgttgcaagagcggttccgtgaatttgcccgagatacagggaacattggacaagag
cgtgttgatgctgttaaccacatggctgatgagctcatcaattctggacactcagatgca
gccaccattgctgagtggaaggatggtctcaatgaggcctgggcagacctactggaactc
attgacacgagaacacagatcctggcagcctcctatgaactgcacaaattctaccacgat
gccaaggagatctttggtcggatacaggacaaacacaagaaactccccgaggagcttgga
agggatcaaaacacagtggaaaccttacagaggatgcatacaacatttgaacatgacatt
caggccttaggaacgcaggtgagacaactgcaagaagatgctgcccgccttcagtctgcc
tatgctggagataaggctgatgacatccagaaacgtgaaaatgaggttctggatgcatgg
aaagccttgcttgatgcctgtgaggggcgcagggtcaggcttgtagataccggtgacaaa
ttccgcttcttcagcatggttcgtgatctcatgctgtggatggaagacgtcattcgccag
attgaagcccaggagaagccaagggacgtttcctctgttgaattgctgatgaacaatcac
caggggatcaaagcagaaatagatgcccgtaatgacagctttacaacatgcattgagcta
ggcaaatcattgctagcaaggaaacactatgcgtcagaagagatcaaagaaaagctgtta
caattgacagaaaagagaaaagaaatgattgacaaatgggaagacagatgggagtggctg
cggctgattttggaagtgcaccagttctcaagggatgccagtgtggctgaagcctggcta
ctggggcaggagccgtacttgtcgagtcgtgagatagggcaaagcgtggatgaggtggaa
aagctgatcaagaggcatgaagcatttgaaaaatctgcagccacttgggatgagagattt
tcagcacttgaaagacttactacgttggaattgttggaagtacgtcggcagcaagaggag
gaagagcggaagaggcagcctccttctccagaacccaagactggagaggagtctcagcaa
tgggatggaacaaaaggagaacagatttcccagaatggtttgccaccagatcaagagtct
ccccggatgggagaaacaagagaagctagtgaaatggtcaacggagcagcagagcagagg
acaagttccaaagagacgagtccagttccctcaccaacagcagatcgcaaagccaagcct
ggcctccaggctcagactgccgccaccctccctgccaaaacgcaagagacgcctccagct
cagatggagggcttcttgcatcgtaagcatgaatgggagtcacacagcaagaaggcctca
aacagatcctggcataatgtctactgtgttatcaacaaccaagagatgggcttttacaaa
gatgcaaaagctgcttcctcgggcattccttaccacagtgagatccctgtgagtctgaaa
gaagcggtgtgtgaagtggcagttgaatacaaaaagaaaaagcatgtgtttaagctaagg
ttaactgatggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacgtgg
atccaggccatcacctctgcaatctcctcggacaagatcgaattgtccacaagcacacag
agcaccccagccacgagccgtgcccagaccctgccagccagcgtgacaataaccagcgag
tccagtcccggcaagagggagaaggaaaaagagaaagacaaagagaagagattcagcctt
tttgggaaaaagaagtga
DBGET
integrated database retrieval system
