Sceloporus undulatus (fence lizard): 121919202
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Entry
121919202 CDS
T07740
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sund03041
]
121919202 (DDX1)
03016 Transfer RNA biogenesis [BR:
sund03016
]
121919202 (DDX1)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121919202 (DDX1)
Spliceosome [BR:
sund03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121919202 (DDX1)
Transfer RNA biogenesis [BR:
sund03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
121919202 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
121919202
NCBI-ProteinID:
XP_042301482
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All DBs
Position
1:150069124..150094139
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGGGVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRSTRGVTKGKYYYEVSCRDQGLCRVGWSSMQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDVDKGQIAFSKNGKDLGVAFEIPAHIKNQALFPACVLKNAELKF
NFGEEDFKFPPKEGYVALDKAPETNVVKSQHAGSAQVTQTKNLPNAPKALIVEPSRELAE
QTLNNVKQFKKNVDNPKLRELLIIGGVAAREQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDKLWERLGKNHIRTDEVHAKDNTRPGAN
SAEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFMQQGGGPDRKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDISGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVASEKEKVWYHSCPSRGKGCYNTRLKDEGGCTIWYNEMQLLG
EIEEHLNCTISQVEPDIKVPVDDFDGKVTYGKRRAAGGGTYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctcagagatgggtgttatgccagagatagctcaagctgtggaagagatg
gactggcttcttcccacagatatccaggcagaatctattccattaatattaggaggcggt
gatgttctaatggctgcagaaactgggagtggaaaaactggtgcattcagtatcccagtt
attcagattgtctatgaaactctgaaggaccagcaagaaggcaaaaagggaaaaactact
ataaaaactggtggaggagtgctcaacaaatggcaaatgaatccctatgacagaggatct
gcatttgctattgggtcagatggtttatgctgccaaagcagggaggtaaaggaatggcat
ggatgcagatcaactagaggtgtaactaaaggaaaatactattatgaagtatcctgtcgt
gaccaggggctatgtagagttgggtggtcctccatgcaagcttctttagatttgggcact
gacaaatttggctttgggtatggtggaactggaaagaaatctcataataaacagtttgat
agctacggagaggaattcactatgcatgacacaataggatgctatctagatgttgataaa
ggacaaatcgccttttcaaaaaatggaaaggaccttggggttgcatttgaaataccagca
cacataaagaaccaagcactcttccctgcctgtgttctcaagaatgctgaattgaaattc
aactttggtgaagaagactttaagtttccacccaaagagggctatgttgctcttgataag
gcacctgagactaatgttgtcaaatcccagcatgcaggaagtgcccaggtaacacagacg
aagaatctgccaaatgctcccaaagccttgattgtggagccatccagagagctagcagag
caaactctgaacaatgtgaaacagttcaaaaaaaacgttgataaccctaaattaagggaa
ctcctcattattggtggtgttgctgcaagagagcagctgtctgtattagaacaaggggta
gacatagttgtaggaacacctggaagactggatgatcttgtgtccactggaaaactcaat
ctatctcaagtcagattcctggttcttgatgaggctgatggtctcttaagccaaggctat
tcagatttcataaacagaattcattctcagattcctcagataacttcagatggaaagagg
ctgcaggtaattgtgtgttctgcaaccctgcattcatttgatgtgaagaaattatctgaa
aaaattatgcacttccctacttgggtagatctgaaaggagaagattctgttccagagact
gtgcatcatgtggttgtccctgtaaacccaaaaactgacaaactctgggaacggcttggg
aaaaatcatatcagaactgatgaggtgcatgcaaaagacaatacaagacctggtgccaat
tcagcagaaatgtggtcagaagctattaagattttaaaaggagaatacactgttcgtgcc
atcaaggaacacaagatggatcaagcaataatcttctgtagaactaagatagattgtgat
aacatggagcaatacttcatgcagcaaggaggaggtccagataggaaaggacatcagttt
tcatgtgtctgcctgcatggtgacagaaaacctcatgagagaaaacagaatttggagcgc
ttcaagaaaggagatgtcagattcttgatctgcactgatgtagctgctagaggaattgat
atcagtggagttccttatgtaatcaatgtcacccttcctgatgaaaaacagaactatgtc
catcggattggcagagtgggaagagctgaacgcatgggtcttgccatttccctggtggca
tcagagaaagaaaaggtttggtaccattcgtgtccaagtcgtggaaaaggatgttataac
actagactgaaagatgagggtggctgtacaatttggtacaatgaaatgcagcttctgggt
gagatagaagagcacctgaactgtaccatttctcaggttgagccagatatcaaagtccca
gtggatgattttgatggcaaagtcacctatggaaaaaggagggctgctggtggtggcacc
tacaaagggcatgtggatattttggcacctacagtacaggagctggctgcccttgaaaag
gaggcacagacatctttcttgcatcttggctaccttcccaatcagctctttagaacattt
tga
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