Sceloporus undulatus (fence lizard): 121919218
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Entry
121919218 CDS
T07740
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sund03400
]
121919218 (GEN1)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121919218 (GEN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
121919218
NCBI-ProteinID:
XP_042301504
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Position
1:151497625..151534742
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AA seq
944 aa
AA seq
DB search
MGVTNLWQILEPVKQHVPLHNLKGKTLAVDLSLWVCEAQTVKKMMGIVTKPHLRNLFFRL
SFLTLMDIHLVFVMEGDPPKLKANTMEKRTEIRFGPSKKSRTARTGRSRFKSLLKECLEM
LECLGVPWVQAAGEAEAMCAYLNASGFVDGCITNDGDAFLYGALTVYRNFTMNIKDPHVD
CYSISAIEKKLGFSRESLIGLAILLGCDYLPKGVPGVGKEQALRLISTLGEQSLLQRFEH
WKGHFQSSNIPPIQHKKLAHCAVCHHPGSSKEHGQTGCHLCGTVGYCEPHDAEYCCPCDW
HASERHWRANSVEEAVRKKAIACEGFPFPEVIREYLISKDKLMKLNECQRPNLLTFQRFA
SEKMDWTKHYACEKLCALLTNYDMNKRRLGQTDPQQLQALRIVKTRTKNGIPCFEIEWQK
PEHYAVGDDQPEEPFMTTIEEAMLFQAAYPEVVALYQMQKLDIGKEKKKGKKTKLKEKEC
LASDSEVANLFSQLNLESAYETFPCKDEKSEFEPVSAFTILPEKGSESQSSHVASQRSTP
VGQSQNPSPTSLITASQNTKEECNLGGPVNSQAEFPKESAAFPASPAIANLQLSGIDWEG
TSFNVSPKQVDVACYLESESHVCTNSIRPHSLMCCELAKTIMPSSDSVQYNPDLLSSADC
AASGNELPKSQSDVSLKEEAILEPSILEAFSKAADTARLSALQTVEQIKGTVSLREAFSS
LSFQLNDSTQKAEKYSRRFDSQSNKEMLKSSKNPVKAEERLIDSDTCASVGLCHETLGLT
CLENKPQALPLRSTEGIDHCQVRKNSRPPILKSSLKKSVCQNSYSSEDSDSENMKDRRKG
HRMPRWQKKCDLVKSKNKYIDKMGVSQLVQEMQQRREEPEPKAPGMGFSVIEQPTVPIPN
PPRLIECKPRGSNPPLEESGSESDGSTNSPLPLSERLKLRLQNS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgactaatctgtggcagatcctggaacctgtaaaacagcatgttcccctccac
aatcttaaggggaagacattagctgtggatttaagtctctgggtgtgtgaagcacaaaca
gttaaaaagatgatgggaatagtcacaaaacctcatcttaggaatcttttctttcggctc
tcttttttaacactgatggatatccatctggtgtttgtaatggaaggagaccctccaaaa
ttgaaagcaaacacaatggagaagaggacagagattcgctttggaccatctaagaagtct
aggactgcaagaacagggagatctcgttttaagtctttactgaaagagtgccttgagatg
ctggagtgcttaggagtcccttgggttcaagcagctggtgaagcagaggccatgtgtgct
tacctaaatgccagtggctttgtggacggctgcatcacgaacgatggtgatgccttcctt
tatggtgctctaacagtttaccggaattttactatgaacataaaggacccacatgttgac
tgctattcaatatcagctattgagaaaaaactaggattcagcagagagtctctgattgga
ttggccattctgcttggctgtgattatctccctaagggtgtccctggagttggaaaagaa
caggctttaagactgattagcactttgggagaacagagtttactgcaaaggtttgagcac
tggaaaggccacttccagtccagtaatatcccacccatacagcataaaaagttggctcac
tgtgctgtttgccaccatccaggatcttccaaagaacatgggcaaactgggtgtcatctc
tgtggcactgtggggtattgtgaaccccatgatgctgagtactgctgtccttgtgactgg
catgcttctgagagacactggagagccaactcagtggaggaagctgtcagaaaaaaagcc
atagcatgtgaaggctttccatttcctgaggttatcagagagtatctcatcagcaaagac
aaactgatgaagctaaatgagtgtcaaaggccaaacttactcacctttcagagatttgct
tctgagaaaatggattggaccaagcattatgcttgtgagaaactgtgtgcccttctgaca
aactatgacatgaacaaaaggaggcttggccagactgaccctcagcaactacaggcacta
cggatagtcaaaacacggactaaaaatggaattccttgctttgaaattgaatggcaaaag
ccagagcactatgctgtaggtgatgatcaacctgaagagccctttatgacaacaatagaa
gaggccatgttatttcaagctgcatacccagaagtggttgccctgtatcaaatgcagaaa
ctagacattggcaaggagaaaaagaaggggaagaaaactaaactcaaagaaaaagaatgc
ttagcaagtgacagtgaagttgccaatctcttttctcagctgaacttggaatctgcatat
gaaacctttccctgcaaagatgaaaagtctgaatttgaacctgtttctgctttcacaata
cttccagagaagggctctgaatctcagagctcacatgtagcctcacagcgttctacacca
gttggtcaaagtcagaacccctcacctacctcactcataactgcttcacaaaacaccaag
gaggaatgcaatctgggtggtcctgtgaactcacaggcagaatttcctaaagagtctgca
gcttttcctgcctctcctgcaattgccaatctacagttaagtggcattgattgggaagga
acatccttcaatgtttctccaaaacaagttgatgttgcctgttatttggagtctgagtct
cacgtgtgtactaattctatcaggccacattccctgatgtgctgtgaattagccaaaacc
atcatgccttcttcagattctgtacaatataatccagatctactcagcagtgcagattgt
gctgcttcaggcaatgagcttcctaaaagtcaaagtgatgtatctttaaaagaagaggcc
attctagagccttccatcttagaagctttttccaaggctgcagacacagctcggttaagt
gctttgcaaacggtagaacaaataaagggaactgttagcctcagagaagcattttcatct
ctttcatttcagctaaatgacagcactcagaaagcagaaaagtattcaaggaggtttgat
tcacaaagcaataaagagatgctcaaaagttccaaaaacccagtcaaggcagaagagaga
cttattgattcagacacttgtgcttcggtaggcctatgccatgaaacgctaggactgact
tgcttggaaaacaaaccacaagcattgcctctcagatcaacggaaggcatagatcactgt
caagttagaaaaaattccaggccacccattctcaaaagctcactgaagaagagtgtgtgc
cagaatagttattctagtgaagacagtgacagtgaaaatatgaaagacaggaggaaaggt
cacaggatgccaaggtggcaaaagaagtgtgacttggttaagtcaaagaacaaatacatt
gacaaaatgggagtcagccagctggtgcaagaaatgcagcaaaggagagaagaacctgag
cctaaagcccctgggatggggttctcagtgatagagcagcccactgtacctattcccaat
cctccaagactcatagaatgtaaacctagaggatctaatcctcccctagaagagagtgga
agtgaatctgatgggtcgaccaatagtcccctgcctctgtcagaaagactgaaactcaga
ctgcagaacagttaa
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