Sceloporus undulatus (fence lizard): 121919284
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Entry
121919284 CDS
T07740
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sund03037
]
121919284 (NPHP1)
Cilium and associated proteins [BR:
sund03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
121919284 (NPHP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
hSH3
Presenilin
Motif
Other DBs
NCBI-GeneID:
121919284
NCBI-ProteinID:
XP_042301665
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All DBs
Position
1:complement(23203886..23250489)
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AA seq
708 aa
AA seq
DB search
MITNKAEAMAGRRGRTGPLQSVLRRSRELREQVSALLQESKEPGTQDSEKRKSLHQRCLE
LKKSVDENAFALQNLKKSDEPAPVGNYYQRKEEEEQELLKLSQQLEKLTAILSCENVIKG
SNVRDSPKTKLVNEQIEDDDDNGSDDEEEDESTQDEEEDEEGENEEEDDDHDDSDEDKLG
DDSAVHFITLGDFAAQQEGDLMFKKGEVLLILEKKSDGWWLGQNSKGERGLVPKTYLMVS
DKEGKIQEQNEEETEEDIEVTDETAGGATIMKRTDSHWSAVKKAITENNTLDALTTMGAV
PAGFRPSTLAQLLEEGIHFRASYFLQPVLTSSNLSFRDLVWNPEKATIQSRPTRISLIVT
LWNCKAIPFPGLSIQVLSRHVRLCLFDGNRILSNIHTVRATWQPKNPKTWTFSPRVTGIL
PCLLDGDCFIRSNSLSPDIGILFELGITYIRNSTGEKGELSCGWAFLKLFDSSGLPVSSK
TYELLLNGGTPYEKGVEVDPAVSRRASGSVFQHMIALRKQPQLLVKLRSLSTQSKDILNL
LPEVLIGSMCYIHLILFYRQILGDALLKERANMQNADLIGNPILATFPKLMEQPDLMDAL
RSAWAEKESTLKRSEKRDREFLKSMFILVYHDSVFPLFQSVFLPEYKWAEEESEGTRWRM
IADFLKKTRERDGALSSLLSSESLHKAFDITEITYDFVGVARKSNPLV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgataacaaataaagcagaagcaatggccgggcgccggggcaggacggggccgctccag
agcgtgctgcgccggagccgagagctacgggagcaggtgagtgctttgcttcaagaaagc
aaagaaccagggacccaagactctgaaaaaaggaaaagccttcaccagagatgtttggag
ttgaagaaatctgtagatgaaaatgcctttgctcttcagaacctgaagaagtcagatgaa
cctgcacctgtgggaaattattatcagagaaaagaagaagaagaacaagagttgctaaaa
ctttctcagcagctagagaaacttactgcaatccttagctgtgaaaatgtgattaagggc
tccaatgtgagagacagcccaaagactaagctggtaaatgagcagattgaagacgatgat
gataatggtagtgatgatgaagaagaagatgaaagtacacaagatgaagaagaggatgag
gaaggtgagaatgaggaggaagatgatgaccatgatgacagtgatgaagacaaacttgga
gatgattcagctgttcattttatcactcttggtgattttgcagcacagcaagaaggggac
cttatgtttaaaaaaggtgaagttcttctcatacttgagaaaaaatctgatggttggtgg
ttgggtcagaattccaaaggagagagaggacttgtgcctaaaacctatctcatggtaagt
gacaaagaaggcaaaattcaagaacaaaatgaggaggaaacagaagaagacatagaagta
acagatgagacagcaggaggagccacaattatgaaaaggacagattcacattggagtgct
gttaaaaaggctatcacagagaataataccttagatgcactgacaactatgggagctgtt
cctgcaggatttcgaccttcaacgcttgcacaactcttggaagaagggattcactttcga
gcttcttacttcctacaacctgtactcacatcttccaatctttcttttcgcgatctagtg
tggaaccctgaaaaagccactattcagtcaaggccaactcggatatcactaattgtgact
ctgtggaactgtaaagcgattccttttcctgggctgagcatacaggtcctcagcagacat
gttcgactctgcctttttgatggtaacagaatcctgagtaacattcatacagttagagct
acatggcaacctaaaaatccaaaaacatggaccttttctccaagggtcactggtatctta
ccatgcttgcttgatggtgattgttttattagatctaattcactatctccagacattggc
atactattcgaacttgggatcacttatattcgtaattcaacaggtgagaaaggagaatta
agctgtggttgggcgtttctaaaactttttgactcaagtggacttcctgtttcctccaaa
acgtatgaactccttctgaatggtgggactccatatgaaaaaggggtcgaggtagatcca
gccgtttcaagaagagccagcggtagtgttttccaacatatgatagcactgaggaagcag
ccacaacttctagtgaagctgagatccttaagtactcaatctaaagacatactgaatctg
ctaccagaagtattaattggcagcatgtgctatatacacctcatactgttttatcgtcag
attcttggtgatgcgctcctcaaggaaagagcaaacatgcaaaatgcagatttgattggc
aatccaattttggcaacatttcccaaacttatggagcagcctgaccttatggatgcactt
aggagtgcctgggctgagaaagagagcacactaaagagatcggaaaagagagaccgggaa
tttctgaagtctatgttcatcttggtgtaccacgattctgtcttccctcttttccagtct
gtgttccttccagaatataaatgggcagaagaagagtcagaaggcacacgctggcgaatg
attgctgacttcttgaagaaaacccgagaaagagatggtgctctctcctctctgctatca
tcagaaagtctccacaaagcttttgatatcacagaaataacatatgattttgtaggagtg
gcaaggaagagtaatcctctggtgtaa
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