Sceloporus undulatus (fence lizard): 121919324
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Entry
121919324 CDS
T07740
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03013
Nucleocytoplasmic transport
sund03015
mRNA surveillance pathway
sund03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121919324 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
121919324 (EIF4A3)
03015 mRNA surveillance pathway
121919324 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121919324 (EIF4A3)
03041 Spliceosome [BR:
sund03041
]
121919324 (EIF4A3)
03009 Ribosome biogenesis [BR:
sund03009
]
121919324 (EIF4A3)
03012 Translation factors [BR:
sund03012
]
121919324 (EIF4A3)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121919324 (EIF4A3)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121919324 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
121919324 (EIF4A3)
Spliceosome [BR:
sund03041
]
Complex C
Other components
EJC/TREX
121919324 (EIF4A3)
Ribosome biogenesis [BR:
sund03009
]
Eukaryotic type
90S particles
Helicases
121919324 (EIF4A3)
Translation factors [BR:
sund03012
]
Eukaryotic type
Initiation factors
eIF-4
121919324 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
121919324
NCBI-ProteinID:
XP_042301750
LinkDB
All DBs
Position
1:21379814..21396929
Genome browser
AA seq
410 aa
AA seq
DB search
MSGAAGGAAGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKP
SAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQ
IQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAI
KMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV
KRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREAN
FTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELY
IHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggcagcggggggcgcggcgggctcggcccgaaagcggctgctgaaggaggaa
gacatgaccaaagtggagttcgagaccagcgaggaggtggacgtcacgccgaccttcgac
accatgggcctccgagaggacctcctgcgcggcatctacgcctacggttttgagaaacct
tcagctatccagcagagagcaatcaaacagatcattaaaggaagagacgtaattgcacag
tcacaatcaggaacaggcaaaacagcaacattttccatctctgtgctgcagtgtctggac
atccaggttcgtgaaacccaggcattgattttggcacctactagagaattggcagtacag
attcagaagggtcttcttgctcttggtgactacatgaatgtccagtgtcatgcctgcatt
ggtgggaccaatgttggtgaagacatcaggaagctggattatggacagcacgttgtagct
ggtacaccaggacgtgtatttgatatgattcgccgcagaagtctaaggactcgtgctatt
aaaatgttggttttggatgaagctgatgaaatgctcaataaaggtttcaaagaacagatt
tatgatgtgtacagataccttcccccagcaacacaagtagttttgatcagtgctaccttg
ccacatgagatcttggagatgaccaacaaatttatgactgaccccatccgcattctggtg
aaacgtgatgaattgactctagaagggatcaaacagttctttgtggctgttgagagagaa
gaatggaagtttgatacactgtgtgacctgtatgacacactcactatcacacaggcggtc
atcttctgtaatacaaagaggaaggttgactggttgactgagaaaatgagagaagccaac
ttcactgtttcatcaatgcatggtgacatgcctcagaaggagagggagtccatcatgaaa
gagttcagatctggggcaagccgtgttcttatttctacagatgtttgggctagaggcttg
gatgtacctcaggtttccctaatcattaactatgacttgcccaacaacagagaattgtat
atacacaggattggtagatcaggtcgctatggccgaaaaggtgttgccatcaactttgta
aagaatgatgatattcgtattttgcgagacattgaacagtactattccacccaaattgat
gaaatgcccatgaacgttgctgaccttatttga
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