Sceloporus undulatus (fence lizard): 121919545 Help Entry 121919545         CDS       T07740                                  Symbol PRPF19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism sund  Sceloporus undulatus (fence lizard) Pathway sund03040   Spliceosome sund04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:sund00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     121919545 (PRPF19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     121919545 (PRPF19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:sund03041]     121919545 (PRPF19)    04121 Ubiquitin system [BR:sund04121]     121919545 (PRPF19)    03400 DNA repair and recombination proteins [BR:sund03400]     121919545 (PRPF19) Enzymes [BR:sund01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      121919545 (PRPF19) Spliceosome [BR:sund03041]  Complex B   Other components    Prp19 complex     121919545 (PRPF19)  Complex C    Prp19-CDC5 complex     121919545 (PRPF19) Ubiquitin system [BR:sund04121]  Ubiquitin ligases (E3)   U-box type E3    121919545 (PRPF19) DNA repair and recombination proteins [BR:sund03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     121919545 (PRPF19) SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_CDC20-Fz Prp19 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML DSE1_N Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_TEP1_C CFAP251_N Beta-prop_WDR41 NBCH_WD40 ASA1 WDR90_beta-prop_4th Beta-prop_HPS5 U-box PEP5_VPS11_N Beta-prop_Vps41 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd PAC11 Beta-prop_VPS8 PROPPIN Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_ACSF4 Cytochrom_D1 Beta-prop_DCAF12 RMC1_N zf-Nse Beta-prop_WDR35_TULP_N TRM82_WD Alpha_humulene_synt DUF1830 CCDC13 Tricorn_2nd ATG16 Cep57_MT_bd Motif Other DBs NCBI-GeneID:  121919545 NCBI-ProteinID:  XP_042302179 LinkDB All DBs Position 1:complement(257389883..257404639) Genome browser AA seq 504 aa AA seqDB search MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHP IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLIVPQAVPSAQPNAVGAGEPMDLGELAGMTPEIIQKLQDKA TVLTTERKKRGKTVPEELVKPEELSRYRQVASHVGLHSASIPGILALDLCPSDTNKILTG GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPSASCVQ VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCALTCAQFHP DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQVYICKQWTEVLHFTEHSGLTTG VAFGHHAKFLASTGMDRSLKFYSL NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atgtccctcatatgctccatttcaaatgaggtgcctgagcatccctgtgtatccccagtc tcaaaccatgtctacgagcgaagactgattgaaaagtatattgcagagaatggaactgat ccagtaaacaaccagccattgtctgaagaacagctcatagatatcaaagttgcccaccca attcggccaaagccaccttctgcaactagtattccagccattcttaaagcacttcaggat gaatgggatgctgttatgctgcatagtttcacactgcgccagcagctgcagactacacgc caagaactgtctcacgccctctaccaacatgatgctgcctgccgtgtcattgcccgtctc accaaagaagtcactgctgcaagagaagctttggcaactctgaaaccccaggccggtctc atcgttccccaggctgtgccttctgcacagccgaatgcagtgggtgctggtgaaccaatg gatcttggagagctggcaggaatgactccagaaattatccagaagcttcaagacaaagcc acagttctgaccacggagcgtaaaaagagagggaagactgtaccggaggagctggtaaag ccagaagaattaagcaggtaccggcaggtggcttcacatgtgggattgcacagtgccagt atacctggcattctggctctcgatctgtgtccttccgacaccaacaagatcctcacaggt ggagcagataaaaatgttgttgtttttgacaagagctcggagcagatcctggcaactcta aaaggtcacactaagaaggtcaccagcgtagtgttccatccatcacaggaactagtgttc tcagcttctccagatgccactatccggatctggtcagttcccagtgcttcatgtgtgcag gttgtgcgtgcccatgagagtgctgtgacagggctgagtctccacgcaacaggagattac ctgctgagctcttctgatgaccagtattgggctttctctgacatccagactggtcgtgtt ctcaccaaggtcacagatgaaacttctggctgtgctctcacctgtgcacagttccatcct gatgggctcatttttggaactggaactatggactctcagattaagatctgggacttaaag gaacggaccaatgtagcaaacttccctggacattcaggacctattacaagcattgccttc tctgagaatggctactacttggccactgctgctgatgactcctctgtcaaactctgggat ttgcgtaaactgaagaacttcaagacactgcagctggacaataactttgaggtgaagtct ctcatatttgatcagagtggaacatacttggccctgggtggcactgatgtccaagtatac atctgtaaacagtggacagaggttctccacttcacagagcatagcggtctgacaacagga gtagcctttgggcatcatgccaagttccttgcttcaacaggcatggacagaagcctgaaa ttttacagcctgtag

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