Sceloporus undulatus (fence lizard): 121919854
Help
Entry
121919854 CDS
T07740
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sund03037
]
121919854 (RP1L1)
04812 Cytoskeleton proteins [BR:
sund04812
]
121919854 (RP1L1)
Cilium and associated proteins [BR:
sund03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121919854 (RP1L1)
Cytoskeleton proteins [BR:
sund04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
121919854 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
121919854
NCBI-ProteinID:
XP_042302753
LinkDB
All DBs
Position
1:complement(6198263..6222220)
Genome browser
AA seq
1893 aa
AA seq
DB search
MTQPSADYFSSSGPYNYDQPLPPLARTNAVTQVPPAKKITFYKSGDPQFGGVKMAINQRS
FKSFNALMDDLSHRVPLPFGVRTITTPRGIHCISTLDQLEDGGCYLCSDKKYVTPISIGA
ANRRTGSQKTGQPVSTLRRAAQDGKHDDYSAGFIQQSPRIPKKVTLVKNGDITIQRPIVL
NRRNARSLKTLLDEISEVMKFTVKKLFTLDGRKIDSMQAVLHCPNVLVCVGREPFKPMVK
ENPRKHSSEKLPGLASRSSSNNNGENQEMNFGLETKKSVMHPRSSLSNRSARFSLSSEKS
STNGLTTSSENGGPFPRNCPHSKAGELAHSLVNDDIEKKVHVNKDGSLSVEMKVRFRLLN
DETLQWSTQIKKSSLMNKIPCEELSINHDNGLESTENPEVSSELDDSFYPCDADSYMSNL
DESENDEARCHKCGKLCKDYDIWKNPMHTSQKEEQGVKSTWYTHSSCSSTSSHRRVIRKK
VASVDSIHTSSSGEEYSKHVVRESSHYSETVENMVEYHSVKNCCCQHGCNQTNTNQRGSP
EEMDAIANSAHSQNEEETSVEGGGDEGKDSRPGSSKSKSSQQSAESQIRVCEVTSSLART
FSSSSIKERGEVEDVASSSPTPNSVYSKSGKGSLLDGAKENADEVSENDQVISSFSTDSC
PKKDAAEEEAEKEDEEINEIYSVSENPGSSPSVKDEVSDCGGCSTARSFGSDSCAGNNPR
SDSDEIHLCSAASASSRKSKRSQNHLEVASNRSVGSSRGSTSSKTKKKKSKSSFPAEDAS
SSSRASYYSRSSYEAEKRDSKAHTSQDSSSPHSHMSSLSEGAAPPAYNEESTSSTSKCYS
KSSQNSQRENQADNSSKISSLCSSFSDSNGKNGVGIPKVSSPEKSSRLGSMSESTCSKCG
HVTKTCHDDLRSASSRVSSYSEGRSGYAETEASGRSDDACSQSSVALSSKPRRKKNSSLY
GDMERASQVSASESASMYSLRCPAPPKGRPSSRKGRTMLLKKSSQGTSACTESEVISDKE
EKEATASQSPETEVVHEPENTAEPLNTEKASCQEKIQEEAEGDDGVIPSSLPNASPEEVV
HEWLRKIPSETLLMKCEMQDDRDGEDLDAEVPGCSSSQELLEIESERNKEDIKQGESTVK
AVEAAAEGAEEEVVEEQPKEDLNAETASEAVLEEAEAGEAKCNHAVLSSQNNHKKDLPNT
IQTSVQIMKALLASKQEPKMDRSHSLPEVSPTMGRKLSNSANILITCLASLQLLDEELDS
SSKSNKCLNRPRYTELLNIFQALWCGCTSESGDPSSGVEKESQAKVPSAFKGHCSKDGDF
TPMSSSGVDVSSGDGGSREGSVAGGRDRALSQEKTEEAKTIEEDAENTEVEADNEDNQGD
ASQPPTVHSKSEGGEKVESAGGEEAAEAEEDQGNDCETGQGVEKEIAEEEEVKEDSKQED
EDVECGETDATIQVEAQDDGIVKEIEDSPSQENDDRVTEEPSNLEATEEPSSHDATEEPS
NLEATEEPSSHEATEEPSNLEATEEPSNLEGEEEPSNLEADEEPSNNETNEEASKLEATK
EPSSHEVIEEPNHNDPCTKEANDTEEPETKGAKQLVAMSDADTQPSEAIVPHQPSVKVSP
MIQQRSIDPDPVWVLKLLKKIELEFMTHYVSAMNEFKVKWNLPNTDEVNQMVSELKEEVR
KRIKTSIEKELRKIKSRAGRRIPRPPDEELRRESTFQVENRRRRLQSIRKMSLYSGRSAN
QSNQQETREVSYEVDEDFIFSTIRDDDSELPSEEEYCPCDACIRKKMEARVIRGPVVPPV
AANAPVVKAFDLQQILKMKKGSVPEKMAEQSIAEEGLDEEAGEETAEPEASQETEPDEGK
EVGETNGKEEEQEMKEDEEEALPEGEEKWKKGL
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccatccgctgactacttctcttcttctggcccttacaactatgaccaaccc
cttcctcccttggctcggacgaatgctgtcacccaggtgcctccggccaagaagataacc
ttctacaagagcggggaccctcagtttggaggagtcaagatggccatcaaccaacgcagc
ttcaagagtttcaatgccctcatggatgacctgtctcacagggtgcctctgccttttggt
gtgcggaccatcacaacaccacgggggatacactgtatcagcacccttgatcagctggaa
gatggtggctgctacctctgttcagacaagaaatacgtcacaccaatcagtattggggct
gccaaccgaaggacaggttctcagaagaccggccaaccagttagcactttgaggagggca
gcccaggatgggaagcatgatgactactcagcaggtttcatccaacagagcccaaggata
ccaaagaaggtcactctggttaagaatggagatattactatccaacggcccattgttctc
aaccggaggaatgcccggagcctcaaaactctcctggatgagatttcagaggttatgaag
ttcacagtgaagaagttgttcacattggatgggagaaagattgacagcatgcaagctgtg
ttacattgtcccaacgtgctggtctgtgtcggccgggagcccttcaaaccaatggtgaag
gagaaccccaggaaacactcttcagagaaattgcctggcctggcttcccgatccagcagc
aacaacaatggtgaaaaccaagaaatgaacttcggactggaaaccaaaaagagtgtgatg
cacccacggtcatctctgagcaatcggtctgcaaggttttccttgtcatcagaaaaatcc
tccacaaatggcctaacaacgtcctcggagaatggcggtccatttccacgcaactgtcca
cattctaaagctggggagttggcccattccttagtcaatgatgacatagagaagaaggtg
catgtgaataaggatggcagcttgtctgttgagatgaaagtccgcttccgtctgctcaat
gatgagactctccagtggtctacgcagatcaagaagtccagcctgatgaataaaataccc
tgtgaagaactgagcatcaaccatgacaatggactggaatcaacagagaaccctgaggtt
agctcagagctggatgactctttctatccttgtgacgctgactcttacatgtccaatctt
gatgagtctgagaatgatgaggctcgttgccacaaatgtggcaagctgtgcaaagactat
gacatttggaagaatcccatgcacacttctcagaaagaagagcagggggtgaagagcaca
tggtacacccattcttcatgctcaagcacttcatctcaccggagggtcatccgtaaaaag
gtagcctccgttgacagcatccatacctcatccagcggagaggaatattctaaacatgtg
gtgcgagagtcttctcattattcagaaactgtagagaatatggtggagtaccattcggtc
aaaaactgctgctgtcaacatggttgcaaccagaccaacacaaaccaaagggggtctcct
gaggaaatggatgccatagccaactcagcccattcacaaaacgaagaggaaaccagcgtg
gagggaggaggagatgaaggcaaagatagccgacctgggagcagcaaatcgaaatcctct
caacaatcagcagaaagccagataagagtgtgtgaggtgaccagcagtttggccagaaca
ttttcgtctagtagcatcaaggaaagaggagaggtggaagatgttgccagctcctccccc
actccaaacagtgtctacagcaaatccggcaagggcagcctacttgatggtgcaaaggag
aatgctgatgaggtttctgaaaatgatcaagtgatttcttctttctccacagattcatgc
cctaaaaaagatgctgcagaggaagaagctgaaaaggaggatgaagagatcaatgaaatc
tattccgtttcagaaaatccaggatccagtccatctgtcaaagatgaagtcagtgactgc
ggaggatgctctacagcaaggtcatttgggtcagactcttgtgctggaaacaacccgagg
agtgacagtgatgaaatacacctgtgtagcgctgcttcggcttcctccagaaagagcaag
cgcagccaaaatcacctggaggtagcatccaacaggtctgttggatcatctagagggtcc
acctccagtaagacaaaaaagaagaagtcaaaaagttctttccctgcagaagatgcaagc
tccagcagcagggcttcatattattccagaagctcatatgaagcagagaaaagagattca
aaagctcacacatcccaggattcaagttctcctcactcacatatgtcatctttaagtgag
ggggcagctcctccagcttacaatgaggagagcaccagcagtacttctaagtgctacagc
aagtcatcccaaaacagccagagggagaaccaggcagataactccagcaagatatcgtcc
ctttgttccagcttctcagacagcaatgggaaaaatggagttggaattcccaaagttagt
tctccagagaaatcgtcaaggctgggaagtatgtcggaatccacctgctccaaatgtggc
catgtaacgaaaacctgtcatgatgatcttcggagcgctagttcaagggtttcttcatat
tctgaaggtaggagcggatatgcagagactgaggcttcagggagaagcgatgatgcttgc
tcacagtcgagtgtggccctgtcttccaagccaagacgaaagaaaaacagcagcctttat
ggtgatatggagcgcgctagccaagtttcagcctctgagtctgcatccatgtacagtttg
cgctgtcctgcccctccaaaagggaggcccagtagcagaaaaggtaggaccatgcttctg
aagaagagctctcaagggaccagtgcatgcacagaatcagaagtaatttcagataaggag
gagaaagaagcaactgcttcacagtcacctgagacagaggtggtacatgagccagagaat
acagctgaacctttgaacacagagaaagcgtcatgccaggagaagatccaagaagaggca
gaaggtgatgatggagtcattccttcttctttgccaaatgcctctccagaagaagttgtg
catgaatggttgaggaagattccttcagagactctactaatgaaatgcgagatgcaggat
gacagggatggtgaagatttagatgcagaagtaccaggctgttcaagcagccaggaactg
ttggagatagaatcagaaaggaataaagaggacatcaagcaaggtgaaagcacagtgaag
gctgttgaggcagctgcagaaggagcagaggaggaggtggttgaagagcaaccaaaggaa
gatctcaatgcggagacagcttctgaagctgtgttagaagaggcagaagctggagaagca
aagtgcaaccacgctgtcctctccagccaaaacaaccacaaaaaagatttacctaacact
atacagacctctgtgcagatcatgaaagcgctgctggcatccaagcaagagccaaagatg
gaccgatcgcatagtttgccagaggtgtcccctacaatggggagaaaactcagcaactca
gccaatattttgatcacttgccttgccagccttcaactccttgatgaagaactggactca
tcaagcaaatcaaacaaatgcctcaacaggccaagatatacagagctattgaacattttc
caggccctctggtgtgggtgcacatcagaaagcggggacccaagttccggtgtggagaag
gaaagccaggcaaaagtgccctctgctttcaaagggcactgctcaaaagacggtgacttc
actcctatgtcttcttcgggagttgatgtgagtagcggtgatggaggctcaagggaagga
agtgtggccggaggccgggatcgtgccttgtcccaagagaaaacagaggaagccaaaacc
attgaggaagacgcagaaaatacagaggtggaagctgataatgaggacaaccaaggcgat
gcttctcagccaccaacagtacactccaaatcagaaggaggagaaaaagtggaatctgct
ggtggggaggaagcagctgaagctgaggaagaccaaggcaatgactgtgaaacagggcag
ggggtcgaaaaagaaatagccgaagaggaagaggtgaaagaagacagcaagcaagaagat
gaagatgtagaatgtggagaaacagatgctactatccaagtagaagcccaagatgatggc
attgttaaagaaatagaagacagtcctagtcaagagaatgatgacagagtgactgaagag
ccaagtaaccttgaagcaactgaagagccaagtagccatgatgcaactgaagagccaagc
aatcttgaagcaactgaagaaccaagcagccacgaagcaactgaagaaccaagcaacctt
gaagcaactgaagagccaagcaaccttgaaggagaggaagagccaagcaacctggaagca
gatgaagagccaagcaacaatgaaacaaatgaagaggcaagcaaacttgaagcaactaaa
gagccaagcagccatgaagtaattgaagaaccaaaccacaatgacccatgtaccaaggag
gctaatgacacagaagagcctgaaacgaaaggagcaaagcagctggtggccatgtctgac
gctgatactcaacctagtgaagccattgttccccaccaaccctcagtgaaagtttccccc
atgatccaacagagatccatcgaccctgaccctgtctgggtgctgaaacttctcaagaag
attgagttggaattcatgactcactacgtcagtgccatgaatgagttcaaagtgaagtgg
aacctgccaaacactgatgaggtgaaccagatggtttctgagttgaaggaagaagtgcgt
aagagaataaaaacaagtattgagaaggagttaaggaaaatcaaaagccgagcaggtagg
aggatcccaagacctccagatgaggagctacgccgcgaatctacctttcaggtggaaaac
cgaagacgccgtttgcaaagcatacgtaaaatgtccctgtacagtggccggtctgcaaac
cagagtaaccagcaagagacaagagaggtatcttatgaggtagatgaagattttattttt
agtaccattagagatgatgatagtgagctacccagtgaggaggagtattgcccatgtgat
gcctgtatcaggaagaagatggaggctagagtcatacgaggcccagtggttccaccagtt
gcagccaatgcaccagttgtgaaggcatttgacctccagcagatcctgaagatgaagaaa
ggtagtgttcctgaaaagatggcagagcaaagtatcgctgaggagggtctggatgaagaa
gctggagaggagactgctgaacctgaagccagtcaggaaacagaacctgatgagggaaaa
gaggtgggtgagaccaatggtaaagaagaagagcaggagatgaaagaagatgaagaagaa
gctctcccagaaggagaggaaaaatggaagaagggtctgtga
DBGET
integrated database retrieval system
