Sceloporus undulatus (fence lizard): 121919913
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Entry
121919913 CDS
T07740
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sund01002
]
121919913
Peptidases and inhibitors [BR:
sund01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
121919913
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
121919913
NCBI-ProteinID:
XP_042302851
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Position
1:complement(209768446..209878258)
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AA seq
1203 aa
AA seq
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MFSRLWWLLFLLDHHPSVAQNTNEEKRNGVRKQKPKAFLSNAVEKYPSSSDQDEDCILEM
AFLLDSSESAKNFNHEQQKKFVLETVDRMNGLQLTSGRHLSWRIALLQYSSTVLIEQTFK
DWKGPDSFKSRIAPITYIGHGTYTTYAITNLTQLYMTEGTHGSVKVAILLTDGVDHPRNP
DIFSATADAKHQGIVFFTVGMTRVAEEVANAAKLRLLASVPASRFVFNLQEKGVVEKILK
EMKDLVEEGCPQPPICNCEKGERGVPGPAGKKGRPGDDGAPGPKGVKGEPGLNGIPGRDG
TEGKSGYKGEKGERGECGTPGIKGDRGPEGPGGPRGLRGLQGPQGLPGDQGPEGVQGSKG
ERGLPGPPGLTGETGIGLPGPKGDIGLTGRPGPVGPPGVGEPGLLGPPGPQGVQGERGSP
GEGLPGPKGDRGFDGPKGPRGQPGIGIKGEKGEIGPPGLPGPIGLPGVGIQGEKGVEGPK
GPPGPRGPTGQGVPGPKGDQGLPGETGAPGERGLGEPGAKGEPGSSGLAGLPGLPGEDGA
PGQKGEPGLPGLRGPEGAPGIGIQGEKGDQGQRGIRGLSGPTGIPGPAGAKGEPGAPGRL
GMPGLPGRAIMGPKGDIGLPGPPGPIGEQGIGIPGAKGDRGHPGPPGPFGPKGDGYLGPP
GLPGLPGAPGEQGPEGIGLPGPKGDPGVRGPVGLPGPSGEGLPGPKGNAGRQGPPGALGA
PGEGIQGPKGEQGIQGMPGPRGPPGEGLLGPKGDRGAAGERGRKGEKGNMGDPGSAGDPG
KTGPKGEQGLTREDIIKLIKEICGCGIKCKEIPMELVFVIDSSESVGPENFEIIKDFVTA
LVDRVTVGRNATRIGLVLYSLEVRLEFGLNRYTTQQDVKQAIRKMLYMGEGTYTGTAIRK
ATQEGFFGARTGVRKVAIVLTDGQADKREAVKLDIAVREAHAANIEMYAIGIVNTSDPTQ
VEFLRELNLIASDPDREHMYLIDDFNTLPALESKLVNQFCEDEHGALIYNRMGNGGSING
PSIHSISSRSSQYLLHANSHNGYEISVKENSVNPGQPSQPLIPDKESPRIFHENYDVGPV
GDDLPFLSPINNKVVTSAVPSTSTPSSPPPPLPSLTTEKMLSPSHLSTSSAAPAPKPENI
LSSPQCKLRLDQGPCRVYIIKWYYDKQANSCAQFWYGGCDGNDNRFETEEECKKTCVFFS
GDV
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgttctccagattatggtggcttttatttctgctggaccaccatccatctgtggcacaa
aacaccaatgaagaaaagagaaatggagtaagaaaacagaagccaaaagctttcctgtca
aatgcagtggaaaaatatcccagttcaagtgatcaagatgaagactgcattctggaaatg
gctttcctcttggacagctcagagagtgccaagaacttcaaccatgaacagcagaaaaag
tttgttttggaaacagtggacagaatgaatggactgcaactcacctctggccgccacctg
agctggaggatagctttgcttcagtacagcagcactgtcctcatagagcaaacattcaaa
gattggaagggcccagattcttttaagtcccgtattgctcccataacatacatcggccat
ggtacttataccacctatgccatcaccaacctcacacagctctacatgactgaaggaact
catggtagcgtaaaagtagctatcctgttgactgacggagtggatcatccaagaaaccct
gatattttttcagctacggctgatgctaagcatcaaggtatcgtgttcttcacagtggga
atgaccagagtagctgaggaggtggccaatgctgccaagctccggctcctggccagtgtt
ccagcatccaggtttgtcttcaatctgcaggagaaaggagttgtggagaaaattctcaaa
gaaatgaaagatctggtagaagaagggtgtccccagcctcctatatgtaactgtgaaaag
ggcgaaaggggtgttcctggccctgctggtaaaaagggccgtcctggtgatgatggagct
cctgggccaaaaggagtaaagggagagccaggcctaaatggaattccaggaagagatgga
actgagggaaagtctggctacaaaggggaaaagggtgaaagaggtgaatgtggaacacca
ggaataaaaggtgacaggggtccagaaggtccaggtggtccaagaggtctccgaggtctt
cagggtccccagggccttcccggagatcaaggacctgagggggtgcagggatcaaagggt
gaaagaggcctacctggccctcctgggttgactggagaaactggaataggattgcctggc
ccaaagggtgacattggtttgacaggaagaccaggccctgttggcccaccaggagttgga
gaaccaggtttactgggacctccaggaccacaaggtgttcaaggagaaaggggttctcca
ggtgaagggcttccaggaccaaagggagatcgtggctttgatggtccaaagggaccccgg
ggccaaccaggcattggcatcaagggtgaaaagggagaaattggcccacctggtttgcct
ggacctattggattacctggtgttggaattcaaggagaaaagggagtagaaggccccaaa
ggaccaccaggaccaagaggaccaactggacaaggggtacctggaccaaaaggtgatcaa
ggtttgccaggagaaactggagcccctggagaaagaggtcttggagaacctggtgcaaag
ggtgagccaggttcttcaggactggcaggattgcctggccttccaggagaagatggagca
cctggacaaaagggagaaccgggtttgcctggactccgtggcccagaaggtgctcctgga
attggaatacagggtgaaaagggtgatcaaggtcaaagaggtatacgtggattatcagga
ccaactggaatccctggaccagcaggggctaagggtgaacctggtgcgccagggcgtctc
ggaatgccaggtcttccaggacgagccattatgggaccgaagggtgatattggattgcct
ggacctcctggccccattggagaacagggcatagggattccgggggctaagggtgaccgt
ggacatccaggaccacctggaccattcggacctaaaggagatggatatctgggcccacct
ggtcttccaggtcttccaggagctcctggagagcaaggtcctgaagggattggtttacct
ggaccaaagggtgatccaggtgtgagagggccagttggtctcccagggccatcaggggaa
ggtcttccaggaccaaaaggcaatgctggtcggcaagggccacctggagctttgggggcc
ccaggggaaggtatccaaggaccaaagggtgagcagggaattcaaggaatgccaggacct
cgagggcctccaggagaagggcttcttggaccaaagggtgaccgtggagctgcaggtgaa
agaggaagaaaaggcgagaaaggcaacatgggtgatcctggttcagctggagatcctggc
aaaactggaccaaagggagaacaaggccttacaagagaagatatcattaaattaattaag
gagatctgtggatgtggtattaaatgcaaggagatacctatggagcttgtgtttgtgatt
gacagctctgaaagtgttggcccagaaaattttgaaataatcaaagactttgttactgct
ttagtagaccgagtaactgtagggagaaatgctaccagaattgggcttgttctttacagt
ctggaggttcgtcttgaatttggacttaacaggtatacgacccagcaggatgtgaagcaa
gctatcaggaaaatgttatatatgggagaaggtacttacacgggaactgccatccgcaaa
gcaacccaggaaggattttttggggctcgaactggcgtgaggaaggttgccatagtcctc
acagatggccaagcagataagagagaagcagttaagctggatattgctgtccgagaagct
cacgcagccaacattgaaatgtatgccattggaatcgtaaacacttcagacccaacacaa
gttgaattcttgcgtgagctgaatctaattgcatccgaccctgacagagaacacatgtac
ctcatagatgattttaatactcttccagcgttggaatccaaacttgttaaccagttttgt
gaagatgaacatggtgccttaatatataaccgaatgggaaatggaggaagtataaatggg
ccatcaattcactcaatatcttctcgttcttcacaatacttattgcatgctaacagtcac
aatggatatgagatatctgtgaaagagaattctgtaaatcctggtcaaccttctcaacca
ttaattccggacaaagaatcacccaggatatttcatgagaactatgatgtgggacctgtt
ggagatgatctcccattcttgtctccaattaataacaaagtagttacatcagcagtgcca
tcaacttcaacaccttcatcaccaccaccacctctgccatctctaacaacagaaaagatg
ctgtcaccatcccatttatcaacttcttctgcagcacctgcaccaaagccagaaaatatc
ctgagttctccacagtgtaaattgagattagatcaaggaccatgccgtgtatatataata
aaatggtattatgataagcaagccaattcctgtgctcagttttggtatggtggctgtgat
ggaaatgataatcgctttgaaactgaagaagaatgtaagaagacatgtgtatttttctct
ggagatgtctga
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