Sceloporus undulatus (fence lizard): 121919938
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Entry
121919938 CDS
T07740
Symbol
ATG13
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04136
Autophagy - other
sund04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121919938 (ATG13)
04136 Autophagy - other
121919938 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121919938 (ATG13)
03029 Mitochondrial biogenesis [BR:
sund03029
]
121919938 (ATG13)
Membrane trafficking [BR:
sund04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121919938 (ATG13)
Atg1 complex
121919938 (ATG13)
Mitochondrial biogenesis [BR:
sund03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121919938 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
PCM1_C
Motif
Other DBs
NCBI-GeneID:
121919938
NCBI-ProteinID:
XP_042302906
LinkDB
All DBs
Position
1:308729836..308773917
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AA seq
513 aa
AA seq
DB search
MDTDLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKISYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRVYIFLMGVMXGFRTVRVGTVVLYWAPS
LVPCLXKQLSFLSTRQFERTHLSWGLSLILVDRPYPSSSPMHPCNYRTGEENVVAYPSVE
DSQEACTTSFSTSPPSQLSSSRLSYQPAALGVGSADLGYPVVFAGGLSAAHPQQLVVPGK
DGGVPLIPSQPMHGTQADHERMVTCTPLDGGHYSAVTPSSSEDTETVSNSSEGKSGSPHD
LLETIFVRKVGAFVNKPINQVTMASLDIPFAMFAPKNIELEDNDPMVNPPGSPETESPLQ
GSLHSVGSSNSSSGNIHDDFVMVDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIG
AQSMAEDLDSLPEKLAVHEKNVKEFDAFVETLQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggacactgatctcagttcccaagacaggaaggacttggacaagtttatcaaatttttt
gccttgaagactgtacaagtgattgtccaagcccgacttggagaaaagatttgtactcga
tcctcatcctcaccaacaggctctgattggttcaatttggcaatcaaagatataccagaa
gttactcatgaagcaaaaaaagccttggcaggacagctgcctgctgttgggcggtctatg
tgtgtggaaatctctctcaaaacctctgagggggattccatggagcttgaaatctggtgt
ttagagatgaatgaaaaatgcgataaagaaattaaaatttcctacactgtgtataataga
ctgtctctattgctgaaatccttgcttgctataacaagggtgactcctgcctatagactt
tcaaggaagcaaggtcatgaatatgtaatattgtacagagtgtatatatttttgatgggg
gttatgtagggtttcagaacagtccgtgttgggacagtggtactctattgggcaccatca
cttgttccgtgcttatagaagcaacttagctttctgtctaccaggcagtttgagaggacc
cacctatcatggggattatcattgatccttgtggaccgtccctaccccagctcctcaccc
atgcacccctgcaattacagaactggtgaggaaaatgtagttgcatacccttctgtggaa
gattcccaagaagcatgtactacttctttttctacttctccaccatcccagctctccagc
tctcgtctttcttatcagcctgcagccttgggagttggatcagctgacttgggctatcca
gtggtctttgctggcggcttgagtgctgcacatcctcagcagttggttgttccagggaaa
gatggaggagtgcccttaattcctagtcaaccaatgcatggaactcaggctgatcatgaa
agaatggtaacatgcactcctttggatggaggccactattctgctgttactccatccagc
agtgaggacacagaaacggtatctaatagtagtgaaggaaagagtggatctcctcatgac
ctcttggagaccatctttgtccggaaggtgggagcctttgtcaataagcccatcaatcag
gtgaccatggccagtttggacattcctttcgctatgtttgctcccaagaacattgagctg
gaagataatgaccccatggtgaatcctcctggctctccagaaactgagtctcctctccag
ggcagtctacattcagtgggctccagtaatagcagcagtggaaacatccatgacgatttt
gttatggtagattttaaaccagcattttctaaagatgacatcctcccaatggacttgggg
acattttatcgtgagtttcagaatcctcctcagctcagcagcctttccattgatattggg
gctcaatccatggcagaagatctggactcacttccagagaaactggcagtccatgagaaa
aatgtcaaagaatttgatgcctttgtagagactttacagtaa
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