Sceloporus undulatus (fence lizard): 121920310
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Entry
121920310 CDS
T07740
Symbol
LAMB2
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04510
Focal adhesion
sund04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121920310 (LAMB2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121920310 (LAMB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
BRE1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
121920310
NCBI-ProteinID:
XP_042303376
LinkDB
All DBs
Position
2:23904130..23965478
Genome browser
AA seq
1774 aa
AA seq
DB search
MIAVWVLGGVLCQDPEPPHGCSQGSCYPSTGDLLVGRADRLSASSTCGLRHRQPYCIVSH
LQDEKKCFACDSRRPYDPLSNPNSHRIENVITTFAPHRKKAWWQSENGMEQVSIRLDLEA
EFHFTHLIMTFKTFRPAAMLVERSADFGRTWQVYRYFAYDCAASFPYASQGPLRRVDDVI
CESRYSDIEPSTEGEVIYRVLDPAIHIRDPYSPRIQNLLRVTNLRVNLTKLHTLGDNLLD
SRREIKEKYYYAVYEMVLRGNCFCYGHASECAPLSGSPADVEGMVHGRCVCKHNTKGLNC
EQCDNFHHELPWRPAEGRRTNACKKCNCNEHSHLCHFDMAVYLATGNISGGVCDECQHNT
MGRHCQLCKPFYYKDPTKDIRDPNVCHACDCDPDGTLDGGVCDTHDDPTLGFIAGQCRCK
EHVQGARCDTCKPGFFGLSADNPQGCQRCQCDPRGTVQDGPQCDAITGDCFCKRLVTGRS
CNQCLPEHWALSPDLHGCRPCDCDVGGAHDNQCATETGQCRCHSHMVGRQCSQVQTGYYH
IMLDHYTYEAEEAELRQGAEVLERVHLTGRPATWTGLGFARVLEGSIVEFRIDNLPFTME
YDILLRYEPQLPGKWEEVKVSVIRPGPIPTSSPCGNTIPADDLMSTSLPATSRYVVLSQP
VCLEQGASYTIQVEFTRYGGHGHLQGAAILLDSLVLMPRYSSLEMFIAGDAASIARKETF
ERYRCAQQARPVIKAPAPEPCTRLLTSMSAIIHQGALPCMCSPQGSLSSECHPNGGQCQC
KLHVMGRRCERCSPGTFGFGPSGCRACQCSTEGSLSGFCDNFSGQCTCRPGAFGLRCDHC
QPGHWGFPNCRPCQCNGRSEECEPRTGSCLHCRGHTEGERCQSCVSGYYGNPLLASGGHC
RPCPCPEAPGSGRHFAATCHQDSRSGTVVCSCLAGYTGPRCDECAPGYYGNPWQAGGRCQ
PCACNNNIDVADPASCDRRTGQCLRCVYHTEGDQCQYCQGGYYGDATRRTCRRCSCNFLG
TVRSECPSQDQCQCEKYSGQCRCLPNVQGQNCDHCAPNFWNIASGQGCQPCDCHPQYSLS
PACNQFTGQCQCRPGFGGQTCSECQENHWGEPNQQCRACDCDPRGIEKPQCHRITGHCSC
RPGVSGVRCDQCSRGFAGEFPACQPCHECFGDWDRIVQDLASRTRTLAQRAQHLQQTGLT
GAFEGAFRQLQEKLSAAQAIVNARNATAGAITHLLHGMDELRQEIADVTETLTRLEGFLT
ATQDKNFNANHVLGTLERGARGLNLSLAELARQLDALMNANVLGAYDSVRQSFVQSREAE
HRANTSTLVVPNPVSQSAATRRRTEHLITTRRDAFNRQNAANRRGLTDLSTRIGGLSLHQ
INEKVCGAPGDAPCATSPCGGAGCRDEDGRRHCGGLNCNGAVATADNALDRARHAEGELR
RAVADVDILLRQVAEAKAQAGQAKQRAQAALDNANATKARLERSNKELRDLIQQIKGFLN
LEGADPDSIALVASRVLELSIPASPAQIHHLAEQIKERVSSLANVDAILDQTAGDVRVAG
QLLQDARRANARAEGVKSAAQAVKKALDDAKRAQSAAEKAIRDAASDIHHTEDVVNRIQA
KTASAEGQLAAAMERVGHLDQQVDALKMKRANNSLAATRAEETASAARDRAGEAEQILDG
PLSDRYRTMKELVEHKAQHVLGARQKAERLRDEAKGLLRDAHDKLRRLSALEETYEENER
LLQEKAAQLDGLEAKMRGILGDINQQIQIYNTCQ
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgatagctgtctgggtgctggggggagtgctgtgccaagatcctgagcccccccatggc
tgttcccaaggtagctgttacccaagcacaggagatctgctggtaggtcgggctgatcgc
ctctctgcctcctccacctgtggtctgcgacatcgccagccctactgtattgtcagccat
ttgcaggatgagaaaaagtgttttgcttgtgactctcgccggccctatgatcccttgtca
aatcctaacagccatcgcattgagaatgtgatcactacttttgcaccacaccgtaagaag
gcctggtggcagtctgagaatggtatggaacaggtgagcatccgcctggacctggaagct
gagttccactttactcacctcatcatgacttttaagaccttccggccagcggccatgttg
gtggagcgttcggcagattttggccgcacctggcaggtgtatcgttactttgcctatgac
tgtgcagcatcatttccttatgcatcccagggacccctgaggcgggttgatgatgttatc
tgtgagtcccgttactcggacattgagccctctactgaaggggaggtaatttacagggtg
ctagacccagctatacatatccgtgacccgtacagtcccagaatccagaatcttctgagg
gtcaccaacctacgggtgaatttgaccaaactgcacacactgggagacaacctgctggat
tcacgacgggagatcaaagagaaatactactatgctgtgtatgagatggtcctccgaggc
aactgtttctgctatggacatgcctcagagtgtgcccccctgtctggaagccctgcagat
gttgagggcatggtgcatgggcgctgtgtctgtaagcacaacaccaaggggcttaactgt
gagcagtgtgacaacttccaccatgagcttccatggcgcccagctgaaggacgccgcacg
aatgcctgcaagaaatgcaactgcaatgagcactcacatctgtgccactttgacatggct
gtgtacctagccacaggcaacatcagtggcggcgtctgtgatgagtgccagcacaacacc
atgggacgccactgccaactctgcaagcccttctactacaaggaccccaccaaggacatc
cgtgaccctaatgtgtgccatgcctgtgactgtgaccctgatggcaccttagatggcggt
gtgtgtgacacacatgatgacccaacactggggttcattgctggacagtgtcgttgcaag
gagcatgtgcagggagcccgctgtgacacgtgcaagcctggcttctttggactgagtgca
gacaacccacaaggctgccagcgctgccagtgtgatccacgaggcacagtgcaggatggg
ccccagtgcgatgctatcacgggtgactgtttctgcaaacggttggtgactgggcgcagc
tgtaaccagtgcctgcctgaacactgggccctgagccctgatctacatggctgccggcct
tgtgactgtgacgtaggaggtgcccatgataaccagtgtgccactgaaacaggacagtgc
cgatgtcacagccacatggtaggcaggcagtgcagccaagtgcagactggctattaccac
atcatgctggatcactacacatatgaagctgaagaggctgaactccgtcagggagctgaa
gttctggagcgagtgcatctcacaggccgcccagctacatggacaggattggggttcgca
agggtgttagagggcagcatagttgagtttcgaattgacaacctgcccttcaccatggag
tatgacatattgctgcgctatgaacctcagctgccaggaaaatgggaagaagttaaggtg
tctgtgataaggcctggacctatccccaccagcagcccatgtggaaataccatccctgct
gacgacttgatgtctacatctttgccagccacatcccggtatgtggtgctgtcacagcca
gtctgtctggagcaaggggccagctataccatccaagtggagttcacccgctatggaggg
catggacatttacaaggtgctgctatcctgctggattctttggtactgatgccacgttac
tcctccctggagatgttcattgctggggatgctgcctccattgcccgcaaggagaccttt
gaacgctaccgctgtgctcaacaggctcggcctgtgattaaggcacctgccccagagcct
tgtacccgcttgctcaccagcatgtcagccatcatccaccaaggggcattgccatgcatg
tgcagcccgcagggctcactgagttctgagtgtcatccaaatggtggccagtgccagtgc
aagctgcatgtcatgggtcgtcgctgtgaacgatgctcccctggcacctttggattcggg
cctagtggttgcagagcatgccagtgcagcactgaagggtccttgagtggattctgtgac
aacttcagtggacagtgcacatgccgacctggtgcctttggtctccgctgtgaccactgc
cagcctggtcactggggttttccaaactgccgcccatgccaatgcaatggacgctctgag
gaatgtgagccacggacaggtagctgtttgcattgccggggccacacagaaggagagcga
tgccagagttgtgtctctggatattatgggaacccattgctggcttcaggtggtcactgt
cgcccctgcccttgccctgaggcacctggctctggacgccattttgctgccacttgccat
caagacagccgctctggaaccgtggtatgcagctgccttgcaggctatacaggcccacgc
tgtgacgagtgtgcacctgggtattatggcaacccttggcaggctgggggacgatgccag
ccctgtgcctgtaataacaacatagatgtggccgacccagcttcttgcgatcgacggaca
ggccaatgcctccgatgcgtctaccacactgagggggatcaatgtcaatactgccagggg
ggctactatggggatgccactcggcgcacctgccgtcgttgctcctgtaatttcctgggc
acagtacgcagcgagtgcccatcacaagaccagtgtcaatgtgagaagtacagtgggcag
tgccggtgcctgcccaatgtccaagggcagaactgtgaccactgtgctcccaacttctgg
aatatagccagtgggcagggctgccaaccgtgtgactgccacccccagtactcactgagc
cccgcttgcaatcagtttacagggcagtgccagtgtcgaccaggttttggaggccaaacc
tgctcagaatgccaggaaaaccactggggtgaaccaaaccagcaatgcagggcctgcgac
tgtgatcctcgtgggattgagaaaccacaatgtcaccgtatcactgggcattgttcttgc
cggccaggcgtgtcaggtgtgcggtgtgatcagtgttcccgtggctttgctggtgaattc
cctgcctgccagccatgccatgagtgctttggggattgggatcgtattgttcaggacttg
gcaagccgcactcgcaccctggcccagcgtgcccaacatctccaacagacaggcctcacc
ggtgcttttgagggtgccttccggcaactgcaggagaagctgagtgctgcccaggccatt
gtcaatgcacgcaatgccactgctggtgccatcactcacctcttgcatggcatggatgag
ctgcggcaggagatagctgatgtaacagaaacactaactcgcctagaaggatttctgaca
gccacccaggacaagaacttcaatgccaaccatgtcctgggcacattggagcgtggtgct
cgtggcctcaacctcagtctggcagagctggcgcgtcagcttgatgcccttatgaatgcc
aatgtcttgggtgcctatgacagtgtccgccaatcctttgtgcagtcacgagaagcagag
caccgggccaacacctccaccttggtggtgcccaaccctgtcagccagtcagcagctacc
cgacgtcgcacagaacacctgataacaacacggagagatgctttcaaccggcagaatgca
gccaaccggagaggcttgactgacctctcgacccgtattggagggctgagcctgcaccag
ataaatgagaaggtatgtggggctccaggggatgctccctgtgccaccagtccctgtgga
ggggctggctgccgtgatgaagatggcaggcggcattgtggggggctcaactgcaatggg
gctgtggccacagctgataatgccctggaccgggcccgtcatgctgaaggagagcttcgc
cgtgctgtagcagatgtggatatcctgctgcgtcaggtggctgaagcaaaggcccaggca
gggcaggcaaagcaaagagcgcaggcagctttggacaatgccaatgccaccaaagcccgg
ctggagcgctctaataaggaactgcgagatctcatccagcaaatcaaaggattcctgaat
cttgagggggctgatcctgacagcattgccctagtagcttctcgtgtgttggaactctcc
atcccagcatcccctgctcaaatccaccatcttgctgaacagatcaaggagcgtgtcagc
agcctggctaatgtggatgccatcttggaccaaacagcaggggatgtccgagtggcaggg
cagctgctgcaggatgcacgccgtgccaatgctcgagcagaaggtgtaaagagtgcagct
caagccgtgaagaaagctcttgatgatgccaaacgggcccaaagtgctgccgagaaagcc
atacgtgatgcagccagtgatatccatcacacagaggatgtggtaaacaggatccaggca
aagacagcaagtgctgaaggccagttggctgctgccatggaacgggtgggccacctcgac
cagcaggtggatgctctcaagatgaaacgggccaataacagcctggcagctacaagagct
gaggagacagctagtgctgccagagatcgagctggagaggctgaacagatcctagatggc
cccttaagtgacaggtaccgcacaatgaaggaacttgtggaacacaaagcccagcatgtc
ctgggggctcggcaaaaagcagagcgcctacgagatgaagccaaggggctgctgcgtgat
gctcatgacaaattgcggcggctcagtgcattagaagaaacatatgaagaaaatgagagg
ctgctgcaagagaaagcagcccaactggatgggctggaagccaagatgagaggcatcttg
ggagacattaaccagcagatccaaatctacaatacctgccaatga
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