Sceloporus undulatus (fence lizard): 121920418
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Entry
121920418 CDS
T07740
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04020
Calcium signaling pathway
sund04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121920418 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121920418 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sund04040
]
121920418 (GRIN2C)
Ion channels [BR:
sund04040
]
Ligand-gated channels
Glutamate (ionotropic)
121920418 (GRIN2C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
121920418
NCBI-ProteinID:
XP_042303490
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All DBs
Position
2:140297928..140365493
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AA seq
1371 aa
AA seq
DB search
MVLGCSAVLMDTFLPSSREPVVNVAIVFGGSLYPLHIRNRLSHQSFLDMPLEIHPVTVVV
NDTNPSTLLTQICGMLSSTKIHGIVFEDNIGTEAVAQILDFISSQTHVPIISISGGSAVV
LTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWSSFAVITSLYPGYTVFLDVIRSFTDAS
YFGWEIQDVLTFEMTQDESDSKIQRLLRQIDAQVMIVYCSRTEAEYLFQMAEQAGLIGPG
YIWIVPSLAVGNMDVPPTSFPIGLISVVTESWKMSLRQKVRDGVAIIALGAESYFKTYGY
LPVVGRDCNNKNPSSAPANNTFYRHLLNVTWEDRDLSFNEGGYLVRPTMVVITLNRHRLW
EMVGKWEKGIIHMKYPVWPRYGSFLQPMADNRHLTVATLEERPFVIVENTDPTTGVCVRN
TVPCRKQPNHTESGDGPMDPYTKLCCKGFCIDILKKLAKTVKFSYDLYLVTNGKHGKIVD
GFWNGMIGEVYYKRADMAIGSLTINEERSQIVDFSVPFVETGISVMVARSNGTVSPSAFL
EPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVGYNQNLTSGKKSGGPSFTIGKSVWLLWA
LVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKF
QKPQDQYPPFRFGTVPNGSTERNIRSNYHDMHSHMVKYNQRSVEDALVSLKMGKLDAFIY
DAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSKWKRAIDLALLQFLGDGETQK
LETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHSVP
KSNKLDFLLAISRGIYSCFNGVQNLESPARVHKPDVTANSAQANVLKMLQAAKSMVSTAS
VGNSLENATRTIENWSNRSENLQTTFSLRTPQLVVQNTSGPNRSAQSSNATVEASEKLGR
PTQPSLPEAQQTLVSASENWSGTIERPQILHPLKYRGSYSEDKVLPGSTVNSSPHYLVRP
TAQAPFRNHVPLGNHLSAVPHSPVRSPRELPPLEQKYKLPMAREHGKERFHRNVHLVYGE
DGRVSSSAQVTRPASEKRKELESHLLSHACMHNSFPRADRTCRPYVYKDSDTEELRREKQ
HHRSNLPRSSWEQHERPKSLGIWKHCGKASVCENVPDLFPQAGLAPKPATVPGIHHGFHH
YSPNALRPSYTCNRKYVEANGLPWKDQRLLHSQSTKLPSYREACLQNTPGMHRASSTVVH
KQYAYMNSYTNLPIYWGRLYQGSPPLCEQSSASQHCFTRAPWSPCSRDFLLHENGQRTMY
FGSTYRDCRDRSRVDPAFLQMERRDFLTTQRMPSPYTSRSWRRISSLESEV
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggtactgggctgttcagctgtcctgatggatactttcttgccaagctccagggaacca
gtggtgaatgtggctatagtttttggaggatccttgtaccctctccacatccgcaaccgg
ctgtcgcaccaaagtttcctggacatgcctttggagattcatccagtcacagtggtagtg
aatgacaccaaccccagcactctcttgacccaaatctgtggcatgctatccagcacaaag
atccatgggattgtatttgaggacaacatcggcacagaggctgtggcacagattctggac
ttcatctcatcccagacccatgtacctatcattagtatcagtggaggatctgctgtggtc
ctgacacctaaggagcctggctctgcctttctacagctgggtgtctcaattgaacagcag
atacaggtgatcttcaaagttttggaggaatacgactggagctcctttgcagttatcacc
agcctatatccaggatacactgtctttttggacgtaatacggtccttcacagatgccagt
tattttggctgggagatccaggatgtcttgacttttgagatgactcaagatgagagtgac
tccaaaatccaaaggttgctgcgtcagattgatgctcaggtgatgattgtgtactgctca
agaacagaggcagaatatctctttcaaatggcagagcaggctggtttgattgggcctggc
tacatttggattgtgcctagtctggcagtggggaacatggatgtcccacctacctctttc
cctattggtctcatcagtgtggtcactgagagctggaaaatgagcttgaggcaaaaggtc
cgggatggtgtggctattattgcgctcggagcagagagctatttcaagacgtacggctac
cttcctgtggtgggcagagattgcaacaacaagaacccctctagtgcacctgcaaacaac
actttctacaggcatttgctcaatgtgacctgggaagacagagatttgtccttcaatgaa
ggcggctacttggtgagacccaccatggtggtaattacactgaatcggcatcggctctgg
gagatggtaggaaaatgggagaaggggatcatccacatgaaataccctgtgtggccacgc
tatggatccttcctgcagcccatggcagacaatcgccacctcacagttgccactctggag
gaaagaccttttgtgattgtggagaacacagacccaaccacaggcgtgtgtgtccgtaat
actgtcccctgccggaagcagcctaaccacactgaaagtggggatggacctatggacccc
tatactaaactctgctgcaaaggcttttgcattgatatcctaaagaagctagccaagact
gtcaagttctcctatgatctctaccttgtgacaaatgggaagcatgggaaaatagtggac
ggtttctggaatggcatgattggagaggtgtactacaagcgagcagacatggccattgga
tcccttaccatcaatgaggagcgctctcaaatcgtagacttctctgtaccctttgtggag
acagggatcagtgtcatggtagccaggagcaatgggaccgtctcaccatctgcttttcta
gaaccttacagtccagccgtttgggtgatgatgtttgtgatgtgtctcactgtcgttgct
atcacagtcttcatgtttgaatatttcagtcctgttggctacaatcagaatttaaccagt
ggcaaaaaatccgggggaccttccttcactattggcaagtcagtctggctattgtgggct
ctagtttttaacaattctgttcccattgaaaaccccaagggaaccaccagtaaaatcatg
gtgctcatctgggccttctttgctgtcatctttctggccagctacactgctaatctggca
gcattcatgatccaggagcaatatattgatactgtctctgggctgagcgataagaagttt
cagaagccccaggatcagtatcccccatttcggtttggaacagttcccaacggcagcaca
gagaggaacattcggagcaactaccatgacatgcattctcacatggtgaaatacaaccaa
cgttcagtggaggatgcccttgtcagcctcaaaatgggaaagctggatgcttttatatat
gatgctgcggtgctgaattacatggcaggcaaagatgaaggctgcaagttggtgaccatt
ggcagtgggaaagtctttgccaccactggctatggcattgctctccagaaagactccaag
tggaagagggccattgatttagcccttttgcaattcctgggagatggtgaaacccagaaa
ctggaaactgtgtggttgtcaggaatctgccagaatgaaaagaatgaggtgatgagcagc
aaactagacattgacaacatggcaggagtcttctacatgctgctagtggccatgggtctg
agcctgctagtctttgcctgggaacacctcgtgtattggaagctgcggcattctgtcccc
aagtcaaacaagcttgatttccttctggctataagcaggggtatctacagttgctttaat
ggagtccagaatctggagagccctgcccgtgttcacaaacctgatgtcacagctaattct
gctcaagccaacgtgctgaagatgctgcaagctgccaagagtatggtgtcaacagctagt
gttgggaattcgttagagaatgctacacgaaccattgagaactggtcaaaccggagtgaa
aacctccaaacaaccttctccttaaggactcctcagcttgttgttcagaacaccagtggc
cctaacaggtcagctcagtcctccaatgcaactgtagaagcaagtgagaaacttgggaga
cccactcaaccatcacttcctgaagcccagcaaactttagtgtcagccagtgaaaattgg
agtgggacaattgagcggccacagatacttcatccactgaagtatcgaggtagctattct
gaagacaaggtccttccaggttccactgtgaacagctctccacattacctggtgagaccc
acagctcaggcacctttcagaaaccatgtgccgcttggaaaccaccttagtgctgttcct
cactccccagtgaggtctcctagggagcttcctccccttgagcagaagtataagcttcct
atggccagagaacatgggaaagaaagattccaccggaatgttcatctagtgtatggagaa
gatgggcgtgtaagctcttcagcccaagtaacaaggccagcttctgagaaaagaaaggaa
ttggaaagtcacttattgtctcatgcctgtatgcacaattccttcccaagggctgacagg
acttgcagaccctatgtgtacaaagactcagacacagaagagctcaggagagagaagcag
caccacaggtctaacctcccaagatcatcctgggagcaacatgagagacccaagtctcta
ggcatctggaagcattgtggaaaagcttctgtctgtgagaatgtgccagacctattccct
caagctggtctggctcccaagccagcaactgtgcctggaatccaccatggattccatcac
tattctcctaatgcccttaggccaagctatacatgcaataggaagtatgtggaggccaat
ggtctaccttggaaggaccaacgactgttgcattcacagtccacaaagctcccctcatac
cgggaggcctgcctacaaaataccccaggcatgcacagggcttcttctacagtggtgcac
aagcagtatgcctacatgaactcttacacaaatctgcctatttactgggggcgcctttac
cagggctctcctccactgtgtgaacagtccagtgcttcccagcactgcttcactcgagct
ccctggtctccttgcagcagggatttcttgctccatgagaatggccagaggaccatgtac
ttcggtagcacatacagagactgcagggaccggagcagggttgatccagcctttcttcag
atggagaggagggacttccttactactcagaggatgccaagtccttacacatctagatcc
tggaggcgtatatccagcctagagtctgaagtctga
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integrated database retrieval system
