KEGG   Sceloporus undulatus (fence lizard): 121920522
Entry
121920522         CDS       T07740                                 
Symbol
FOCAD
Name
(RefSeq) focadhesin
  KO
K27498  focadhesin
Organism
sund  Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:sund00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sund03019]
    121920522 (FOCAD)
Messenger RNA biogenesis [BR:sund03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     121920522 (FOCAD)
SSDB
Motif
Pfam: Focadhesin DUF3730 PH0730-like_N
Other DBs
NCBI-GeneID: 121920522
NCBI-ProteinID: XP_042303593
LinkDB
Position
2:199080196..199228411
AA seq 1692 aa
MKVNRKQSGRWTLLELYAIRNSPHPLITVLENRPDCWPILLQHLTTFFQHCPDSTENSCV
SIMRPFLRYLYCEPCQLREHAELRMALLRVLLQPHEPGSKEEPTALECHLLQLFCDLVPH
RQVKDLPQVTETLLFLQELFQSLLRYPNVWKIQLCQLSLQLLCFCEVSLQSTGECSSLIC
LMEENVELLKEDFPFEMAIIGLGFLLLQAPANQQKPILKLAIKILSCSETKKTQTAALIL
VMPALQILSSTAVQDYITEDSGGTTRQQLAINLLEIVQQEEMNEKNQPACSDRFFPITSA
YGSLHTTWKILELLRERSSTFDWLSSVKSMLPITTDVPVHVFLLLAYLLVQENGESLRDV
LATTTEIAKADSSQVPNLIPVLMFKLGKPLESVLCRDILYTLPALGVHKVCVAQILRALQ
VLGSTPKLQAVTLRLMTSLWEKQDRVYPELQRFMAMSDMASLSVSKDTQWEKVIAKAASI
RDICKQRPYQHGADMLAAISQVLNECTKPDQATPAVLVLQGLHALCQAEVVCIRSTWNAL
STKLSCDTRPLILKTLSELFSLVPSLMVNSNEYEKFKAQVVSFLWNHTQNKDPVVATAAY
KSLSEFGSEEHTILHLPEQARPEKDQQEEEDINEEEGEEEEIDLSVPGASYIKLLLLTSS
PVLPAFEEFSASLVKQEMANMPRGIYHSALRGSAVRSDQGKTVSGVPNFMLKMYERNKQP
GLRPGLAGGMLLSYDLPIHMGKDGKPISRFLASRGRNFHQMLTALLHEVNIQPSEWHRSL
LLPQSWAGFMERTYHAILQGRQAELEMQLKHGKEGPEEVQYKQFTAWLWVRDMLTDVIKG
ASKESPVVKGNCLLALTGLAVVVAKHEKGLSSDMEKQFDTEPDFLLTKHWISMVIDTLLS
IVDSHYRPKGQVFPWFYQKSYSGENTASAIARSCAATALSLLVPVFIVSYKEKVEEVLNL
LIALLPGKPNADESQAVQIHMGLALGMFVSRLCKEKVSDISDKQTNPLMMKSLNALEDCC
FDTSLEYNTGCILGVGLVLSLMCHSNLTDSQDYISGTLRKLCKYLDDAEDQSRTFQEILA
YAISCVSISTFSVKIIEAVEAEEIMNKLQKLTEANQQTAGFALALGNVVHGLSVSGHGKA
EDLGNRLFPAWMKIVLAEGAPTMQRLAAVNGLVSVVGSERAMLQLKTEAIQSSQFQSKLN
EVIRTLSQIISFSGVIGLQTNSAWLLGHLHLSTVSATHSQTSVPPDFSYLPEKSFLRAAT
DFMIEAGKKGPEQVLPNLVKAAMVPIALTGESYQYPPVNWASVLSPLLRLDFGDEIQQLC
IKLAVTQAQSSQNAAMLLGMWVAPPLVYSLSIQAKRYLFTSLPVWVKYVAEDKLQAFTEV
FMVQHFEVKNQPKDLELCWNILQGLHQAMKLPSPAQYSWSCLCRAAERIFELLPNEIRQN
EVKMYIESAKCFSEMTDTEVDRIAQASKNNLEKVTFVKVYLVSQGRFPLLRWSDVISTAA
GYQQKETIVWMLLHSFYHARIVIHENTGVLKRMEWLLELMGFIRNVSLKMTSIPNVAPGE
AVSFCLWIFASAVVAWADHAAPLLLGLSANWSPWESEAASRLSPNYLGKRPVDRLAIQET
LTLLPGSLQTLLAKEPWKEQTQKFIDWQFSIMEASSEVLSHAYRDLLKASLLTLRSLPEF
KKKATWTKAYGW
NT seq 5079 nt   +upstreamnt  +downstreamnt
atgaaggtaaataggaaacagagtgggagatggacactattggagctctatgcaatcagg
aactcccctcatcccctgattactgttcttgaaaacagacctgactgctggcccattctt
ctgcagcacttgacaacatttttccaacattgcccagacagcacagaaaattcctgtgtt
tctataatgaggccatttctaaggtacctctactgtgagccttgccagctgcgagaacat
gctgaattacggatggccctacttcgagtcttgcttcagccacatgagcctgggagcaaa
gaagaacccactgccctcgagtgccacctccttcagctgttttgtgacttggttccacat
cgtcaggtaaaagatctgccacaggtcacagagacactgctttttctgcaagagttattc
cagagtctgctacgctaccctaatgtttggaaaatacagttatgccagctctccctgcaa
cttctgtgcttctgtgaggtttccctgcagagcacaggggaatgttcatctttaatttgc
ttaatggaagaaaatgtggagcttctgaaagaggactttccatttgaaatggccataatt
ggattaggcttccttctgttgcaggctccagccaatcaacaaaagccaatcttaaaacta
gccatcaagatcctttcctgttctgaaaccaagaagactcagacagcagcccttatcttg
gtgatgcctgcactgcagatcttatcatccacagcggtacaggactacataactgaggac
agtggaggcactacaagacagcagttggccattaatcttctagaaattgtacagcaggaa
gaaatgaacgagaaaaaccaaccagcttgttctgatcgcttcttccccataaccagtgct
tatggttcattgcacactacttggaagatccttgagcttctgagagaaaggtcttctaca
tttgattggttatcttctgtgaagtcgatgctgcctattacaactgatgtccctgtccat
gttttccttctgctggcctatctccttgttcaagaaaatggagagagccttcgtgatgta
ctggctactactactgaaattgccaaagcagattcatcccaggtgccaaacctgattcca
gtcctgatgtttaagctgggaaaaccactggagtctgtactgtgccgggatatcttgtat
accttgcctgctttgggtgtgcacaaggtttgtgtggcgcagattttacgtgcactgcag
gtgttgggaagcacgccaaagcttcaagctgttacgttacgactgatgacatctttatgg
gagaaacaggatcgagtttatccagagctgcagagattcatggcaatgtctgatatggcg
tctctgtctgtcagcaaagatactcagtgggaaaaagtgattgccaaagcagcctctatc
agagacatatgcaagcaaagaccataccaacatggagcagatatgttggctgcaatttct
caagtactgaatgagtgcacaaaacctgaccaagccacaccagctgtcttagtcttacaa
ggacttcatgcactttgtcaagctgaggttgtttgcattcgctctacatggaatgcactc
tcaacaaagttgagttgcgacactcggccactcattttaaaaacactgagcgaactgttt
tcccttgttccatcattaatggtgaattcaaatgagtatgagaaatttaaagctcaagtt
gttagcttcctgtggaaccatacacagaacaaggatcctgttgtagccactgctgcatac
aaatctctgtctgaatttggttcagaagaacataccatccttcatcttcctgaacaggca
aggccagaaaaggaccaacaggaagaggaagacataaatgaagaggaaggtgaagaagaa
gaaatagatctctctgttcctggtgcctcatatatcaaactattattgctcacctcttct
cctgttttgccagcatttgaagagttttccgcatcactggtgaaacaggagatggccaac
atgccccgtggaatataccattctgcgctccgtggaagtgctgtgcgatcagaccaaggg
aagactgtgtcgggtgttccaaactttatgctaaaaatgtatgagaggaataagcagcca
gggctgaggcctggccttgcaggtggcatgttactgagttatgatcttccaatccacatg
ggcaaggatggcaagcctatcagtcgattcctagctagtaggggacgcaatttccaccaa
atgttaacagctctccttcatgaggtaaacattcagccttcagagtggcaccgctctctg
ctgctgcctcagtcctgggcaggatttatggagagaacatatcatgccattttacaggga
aggcaagctgagttggagatgcagttaaagcatggaaaagagggacctgaagaagtgcaa
tacaaacaatttacagcctggctctgggtcagagatatgctgactgatgtaatcaagggt
gcttcaaaggaaagcccagtggtaaaaggaaattgtctcctagccttaacaggtcttgca
gttgttgtagccaaacatgagaaagggctttcttcagacatggaaaaacagtttgatact
gagccagactttcttttgacaaagcactggatctccatggtgattgatacgctgcttagc
attgtagatagtcattatcgccccaaaggccaagtcttcccatggttttaccagaaatcc
tactctggtgaaaatacagcgagtgctattgctcggtcctgtgcagcgactgctttgtct
cttttggtgcctgtttttattgtatcctacaaggaaaaggttgaggaagtcctgaattta
ctgattgctctgttacctgggaaaccaaatgcagatgagtctcaggctgttcaaattcac
atgggccttgctttggggatgtttgtttcacggctctgcaaagagaaagtcagtgatata
tctgataaacaaacgaatcccttaatgatgaagtctctgaatgcattagaagactgctgt
tttgacacaagtctagagtacaacactggatgcatcttgggtgtaggacttgttctctca
ctgatgtgtcacagcaacctaacagactcccaagattacatctctggtaccttgcgtaaa
ctttgcaaatacttggatgatgcagaagaccaaagcagaaccttccaggaaattcttgcc
tatgcaatttcctgtgtcagcatttccacttttagcgttaagatcattgaagctgtggag
gccgaagagatcatgaacaagttgcagaaattaacagaagctaatcagcagacagctggc
tttgctttggcactggggaatgtcgttcatgggctatctgtgtctggtcatggtaaagca
gaagaccttggtaacaggctgtttccggcctggatgaaaattgtacttgcagagggagcc
cctacaatgcaacgccttgcagcagtcaatgggctggtctctgtggtaggttctgaaaga
gcaatgctacagttgaaaactgaggctatccagtcttcgcagtttcaaagcaaacttaat
gaagtcatcagaaccctgagccagataatcagcttttctggagtgattggccttcaaaca
aattcagcatggcttttgggacatctgcatctctccactgtgtctgcaacccatagtcag
acatctgttccaccagattttagctacctgcctgaaaaaagcttccttagggcagcaact
gactttatgattgaagctggaaagaaaggccctgaacaagttcttcccaacttggtaaag
gcagctatggtccccatagcattaactggagaaagctaccagtatccaccagtgaactgg
gcatcagttctttcacctctactgaggttagattttggagatgagatacagcagctctgc
attaaactagctgtgacccaggcccagtcatctcagaatgcagcaatgcttttggggatg
tgggtagcaccacctctagtatacagtctaagtatccaagcaaagagataccttttcact
tctttacctgtgtgggtgaagtatgttgcagaagacaagctgcaggctttcactgaagtg
tttatggtgcagcattttgaagtaaagaaccagccaaaagatttggagctttgctggaac
attctacaggggctccaccaagccatgaaacttcctagccctgcccaatacagctggagc
tgtctttgtagagctgctgagaggatatttgagcttttgccaaatgagattcggcaaaat
gaggtgaagatgtatatagaatcagcaaaatgcttttcagaaatgacagatacagaggtt
gatcgaattgcccaagcctcaaagaacaacctggaaaaggtcacatttgtcaaagtttat
ttagtttctcaaggcagatttcctttgctcagatggagtgatgtgattagcactgcggct
ggataccaacagaaagaaaccattgtatggatgctactgcacagcttctaccatgcacga
atagtgatccatgaaaacactggagtcttaaagagaatggagtggctgttggaactgatg
ggatttattagaaatgtttctttaaagatgacttctataccaaatgtggctcctggagag
gctgtcagtttctgtttgtggatctttgcttctgctgtggttgcctgggctgaccacgct
gcaccactgctacttggcctcagtgctaattggtctccctgggaaagtgaagcagcctca
agattgtctccaaattatttgggcaagcggccagtagatagattggccatacaagagacc
ctcacccttcttccagggagcctgcaaactctattggctaaagagccatggaaagaacag
acacaaaagtttattgactggcagttcagcataatggaggcatcaagtgaagtactgtcc
catgcttacagagatcttttgaaagcttcactgttgaccctgaggtctctcccagagttc
aagaagaaggcaacatggacaaaggcttatggatggtag

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