Sceloporus undulatus (fence lizard): 121920865
Help
Entry
121920865 CDS
T07740
Symbol
TNRC6C
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6C protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121920865 (TNRC6C)
03036 Chromosome and associated proteins [BR:
sund03036
]
121920865 (TNRC6C)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121920865 (TNRC6C)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Gene silencing
piRNA pathway
121920865 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
RRM_1
UBA
RRM_occluded
DUF4718
Motif
Other DBs
NCBI-GeneID:
121920865
NCBI-ProteinID:
XP_042304056
LinkDB
All DBs
Position
2:134975134..135142627
Genome browser
AA seq
1916 aa
AA seq
DB search
MLWVPWLLHLPGREKDQTQEEEHLMEEKKKKKQEEKKKKEGAQKKAAEQKTKVPEPIKTS
LSQLQPAGTSTSTSTSTITNNSNGKRASANGQQPAASRYLPREVPPRFRQQEQKQLLKRG
QPLPTGTLISTSPGQGTGQAGTSPPPQPGAGGHHHPSKTQNPADLGHSGLGDHYENTHWG
QQPSFRSETNCSWDKVIIDRTDKEAWPSITGTETESASECTTDTDSASNCGSENSSMATG
SAQGNFTGHTKKPNGNNGTNGALIQSTSNQSALGAGGANGNGNSARVWGVATGSNSGLAH
CSASGGDGKMDNMIGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVGAGNSS
SICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQESTEPQTSASQNVSFSVQPQNLNTDGP
NNANPMNSSPNPINAMQTNGLPNWGMAVGMGAIIPPHLQSLPGANGTSVSQVSGGSGEGM
GNSVWGISPGNPAAGNSNSGFSQGNGDTVNSALSAKQNGSSSAVQKEGNGTSAWDSGPPT
GPGVLAWGRGSGNGSVGNMHSGAWGHRSTSNGVNGEWSKPTNQHSNNDINGKGSTGWDSS
SVTSQNTAMQQGNEQINSWAKAAASGNTGSEGSNDSNGSQNEGSTGREGAGEGRRRDKGM
IDQGQVQLPRSDLDPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCAATQP
SNSGGKNDGSIMNSTNTSSVSGWVSSPPTTVPTNTGWGDNNNKAPNGPGGWGEPTNSTAV
NNAAAAKSGHTWSGTTNQEDKSPTWGEPQKPKSQNWGDGQKSNPGWISGGGDWVDSSSVP
GHLGDGKKNVSGWDADNRSGSGWNETTRSGTSGWGNGTNSKANTGTSWGESLKPGPQQNW
ASKSQDNNMSNWGGAASVKQTGSGWVGGPVPAKQKDSSEATGWEEPSPPSIRRKMEIDDG
TSAWGDPNYNNNKTVNMWDRNNPVIQSSTTTTTTSATIINANMAEPQPPHQSSAQSNRSP
LLGPAGWGEMPAVHAKPEASWGEPSSPSAAVDNGTSAWGKPPSSGTGWGDSSAESAGTYG
RVSAPAAAPALCKPASKSSMQEGWGSGGDEVNLSTSQWEDEEGDMWNNTASQESNSSCSS
WGNAPKKGLQKGMKTSSKQDEAWIMNRLIKQLTDMGFPREPAEEALKSNSMNLDQAMSAL
LEKKVEMDKRGMGVADYNGMVTKPLGCRPPPISKESSMDRPTFLDKDGGLVEEPTTSPFL
PSPSLKLPLSNSALPNQTLGGIASGLGMQNLNSSRQIPSGNLGMFGNSGAAQARTMQQPQ
QPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQL
YQLQLAYQRLQIQQQMLQAQRNVSGPIRQQEQQVARTINNMQQQIQQHQRQLAQALLMKQ
QPPPPPPPHLSLHPSAGKSAMDNFSPHPQAPGLSDLQTKEQQSSPNTFAPYPLAGLNPNM
NVNSMDIPGGLSVKDTSQSQSRLPQWTHPNSMDNLSSAASPLDQNPSKHGAIPGGLSIGP
PGKSSIEDSYGRYDLIQNNESPASPPVAVPHSWSRAKSDSDKISNGSSINWPPEFHPGVP
WKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGKLSDIKSTWSSGPISHTQ
ASLSHELWKVPRNTTAPTRPPPGLTNTKPSSTWGASPLGWTSSYSSGSAWSTDSSGRTSS
WLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVL
GNTTILAEFAGEEEVNRFLAQGQPLPPTSSWQSNTGTTQTRLGSTSSSHGMVRNETGHWN
APCLGGKGSSDLLWGGVPQYSSSLWGPPSTDDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggttccttggctccttcaccttcctggcagggagaaagaccaaacacaagaa
gaggaacatttgatggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaa
ggtgctcagaaaaaggctgctgaacaaaaaaccaaagtgccagaacctattaagaccagt
ttaagccagctccaacctgccggtaccagtaccagtacttccaccagcactattactaac
aatagcaatggcaagcgtgcatctgccaatgggcagcagccagctgcatcccgatacctg
cctcgtgaggtgcctccacgcttccgccaacaagaacagaagcagctcttaaagagaggc
cagcctctgcctactggaactctgatcagcacgagtccaggacaaggtactggacaagca
gggacaagtcctcctccacagccaggagcaggtggacatcaccaccccagcaagactcag
aacccagcagaccttggtcacagcggattgggagaccattatgagaatactcactgggga
cagcagccctctttccgaagtgaaaccaattgcagctgggataaagtgataatagacagg
actgacaaggaagcgtggccttccattacaggaactgagactgagtctgcctcagaatgt
actacagacactgactctgcctccaactgtggctcagagaacagtagcatggctacaggg
agtgcccaaggcaacttcactggacatacaaagaaacctaatggcaataatggcaccaat
ggagcactcatccaaagcacttctaaccagagtgcccttggagctggtggagcaaatggc
aatggaaactcagccagagtgtggggtgttgccacaggttccaactctggcttagctcat
tgttctgccagtggtggggatggaaagatggacaacatgattggagatggtagaagtcag
aattgctggggtgcttccaactcaaatgctggcattaatcttaaccttaaccccaatgcc
aatccagctgcctggcctgtactcggacatgaaggaactgtgggagcaggcaactcttcc
agtatttgcagtccagtcagtgccataggtcagaacatgggcaaccagaatgggaaccca
acaggcaccttaggtgcttggggaaacttgttgccgcaagagagcacagaaccacaaacg
tccgcttctcagaatgtgtctttcagcgtacaacctcagaaccttaacactgatggacca
aataacgctaaccccatgaactcttcaccgaaccctatcaatgcaatgcagacaaacgga
ctgccgaactggggcatggctgttggcatgggggccatcatcccaccccacctgcaaagc
cttcctggtgctaatgggacatcagtttctcaagtcagtgggggaagtggagaaggaatg
ggcaattcagtgtgggggatatccccaggtaatcctgccgcaggaaacagcaattctggg
ttcagtcaggggaatggagacactgtgaactcagcattaagtgctaaacaaaatggatcc
agcagtgctgtgcaaaaggaaggaaatggaacaagtgcatgggattcaggacctcctact
ggtcctggggtcttagcatggggcaggggcagtggcaacggtagtgttggtaatatgcat
tctggtgcttggggccaccgcagcaccagcaatggtgttaatggcgaatggagcaagccc
acaaaccagcattccaataatgacatcaatgggaaaggatcaacagggtgggatagctct
agtgttaccagccagaatactgccatgcagcagggcaatgaacaaataaactcttgggcc
aaagctgcagcatctggcaacacaggtagtgaaggaagtaatgatagcaatgggagtcag
aatgaaggcagcactgggagggaaggagctggagagggccgaagaagagacaagggaatg
atagaccaaggacaagtccagttgccaaggagtgaccttgacccgagggttctgtccaac
actggatggggacagactcctgtaaagcaaaacactgcctgggaatttgaagaatctcca
aggtctgagcgaaagaacgataatggaactgaggcctggggttgtgcagctactcagcct
tcaaattcggggggcaagaatgatgggtccatcatgaacagtacaaatacctcttcagta
tctgggtgggtcagctctccacctacaacggttccaaccaatacaggttggggcgacaac
aataacaaagcgccaaatggccctggaggatggggagagccgacaaattctactgctgtc
aataatgctgctgctgccaaaagtggccacacttggagtgggaccacaaatcaggaggac
aagtcgcctacttggggtgaacctcagaaacccaaatctcaaaactggggagatggtcag
aaatcaaatccaggctggatttcagggggtggagattgggttgattcctcatctgtccct
ggacacttgggagatgggaaaaagaatgtttctggatgggatgctgacaatagatcaggg
tctggttggaatgaaactacacgttctgggaccagtggatggggaaatggcacaaacagc
aaggctaatacaggtacaagctggggggaatcgttaaaacctggtcctcaacagaattgg
gcttctaaatcccaggacaacaacatgagcaattggggaggagctgcttctgttaaacag
actggatcaggatgggttggtggaccagtaccagccaaacagaaggacagtagtgaagca
acggggtgggaagaaccctctccaccgtccattcggcgcaagatggagattgatgatggt
acctcagcttggggtgacccaaattacaataataacaagactgtaaatatgtgggataga
aataatcctgtaatccagagcagtaccacaaccacaaccacttccgccaccattatcaac
gcaaacatggctgaacctcagccaccgcaccagtcaagtgcccagtcaaaccggtcccca
ctgcttggtccagcaggctggggagagatgcctgctgtccatgcaaagcctgaagcttca
tggggagagccttcctccccttctgctgcagttgataatggcacttcagcatgggggaag
ccccccagcagtggtacagggtggggagatagttctgctgagtcagcagggacatatgga
agagtgagcgcaccagctgctgccccagcactgtgcaaaccagcttctaaatcttctatg
caagaaggctggggcagtggtggagatgaagtaaatctcagtacaagtcagtgggaagat
gaagaaggagatatgtggaataatactgcttcgcaagagagcaattcctcttgtagctcc
tggggaaatgccccaaagaaaggacttcaaaagggcatgaagacatctagtaagcaagat
gaggcctggatcatgaaccgtctgataaaacagctcacagacatgggcttcccaagagag
ccagcagaagaggccttgaagagtaacagtatgaatctagatcaggccatgagtgctctg
ctggaaaagaaggtggaaatggacaagcgtggaatgggagtggctgactacaatggaatg
gtcaccaaaccccttggctgccgcccaccaccaatctccaaagagtcttccatggaccgc
cccactttccttgacaaggatggcggcctagtggaagagcccactacttcaccatttttg
ccttcaccaagcctgaagctccccctttcaaacagtgcactccctaatcagaccctgggt
gggattgcctcagggctgggcatgcaaaacttgaattcttctagacagataccgagtggc
aatctgggtatgtttggcaatagcggagcagcacaagccaggaccatgcaacagccgcag
caaccgccagtgcaacctcttaactcatcccagcctagtcttcgtgctcaagtgcctcag
tttctctcccctcaggttcaagcacagcttttgcagtttgcagcaaaaaacattggtctc
aatcctgcactattaacctcgccaattaatcctcagcatatgacgatgttgaaccagcta
tatcagctgcagctggcgtaccaacgtttacaaatccagcagcagatgttacaggctcag
cgtaatgtttccggacccatcagacaacaggagcagcaagttgcacgtacaatcaataac
atgcagcagcagatccagcagcaccagcgccagctggcccaggccctgcttatgaagcag
cagccaccccctccgccccctccgcatctatctttgcacccctctgcaggcaaatcagcc
atggataacttttcaccccatccccaggctcctggcctttctgacctgcagaccaaagag
caacagtcttcaccgaacacctttgctccttacccccttgctggactgaacccaaacatg
aatgtaaacagcatggacattcctggtggtttgtcagtgaaggatacttctcagtcccaa
tctcgccttcctcagtggacacaccccaactcaatggataatctctccagtgctgcttct
ccacttgaccagaaccctagcaagcacggtgctatccctggaggtctgagcattggtcct
ccaggaaagtcctccattgaagactcttatgggcggtatgatctgattcaaaataacgag
tcaccagccagtcctcctgtagccgttcctcacagctggtcacgtgccaaatctgatagt
gataaaatctctaatggctccagcatcaactggccaccagaatttcatcctggagtacca
tggaaaggattgcagaacattgaccctgagaacgatcctgatgttacgcctggaagtgtt
ccaacagggccgactattaacaccaccatacaggatgttaatcgttatctacttaagagt
ggaggtaaattgtcagatatcaagtcaacgtggtcctctggcccaatttctcacacacaa
gcctctctgtcacatgaactgtggaaggtacccagaaacactactgctcctacaagacca
cctccaggcttaacaaacaccaagccatcatctacctggggtgccagcccactgggttgg
accagctcttactcctctggctcagcctggagtactgacagctcaggaagaacaagtagc
tggctggtccttcgtaacctcacaccccagattgatggatctacactgcgtaccctgtgc
ttgcaacatggtcctcttattacattccatctgaacctgactcaagggaatgctgtggtc
cgatacagttccaaggaagaagcagcgaaggcccagaagtctctgcatatgtgtgttttg
gggaacactaccatcttggccgagtttgctggagaagaagaagtgaaccgttttttagca
caaggccagccactgccccccacctccagttggcagtccaacactggaaccactcagaca
cgtttgggctccacaagcagctcacatggcatggtgcgcaacgaaacaggccactggaat
gccccttgcctaggtgggaaagggagcagcgatctgctctggggcggggtcccccagtac
tcaagcagcctttggggtccacccagtaccgatgacggcagggtgattggaagcccaacg
cctttgaatactctgctcccaggtgaccttctgagcggggagtccatctag
DBGET
integrated database retrieval system
