Sceloporus undulatus (fence lizard): 121921265
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Entry
121921265 CDS
T07740
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sund03041
]
121921265 (DDX39A)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121921265 (DDX39A)
Spliceosome [BR:
sund03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121921265 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121921265
NCBI-ProteinID:
XP_042305003
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All DBs
Position
2:complement(124972234..124998747)
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AA seq
462 aa
AA seq
DB search
MAEQDVENELLDYEEDEEPQAVTDAAPVPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPMDGQVSVLVMCH
TRELAFQISKEYERFSKYMSAVKVSVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALVR
NKTLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDTEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMSQEERGAGISVWEPWLMQIGLDERLSPTSGGLDSPFSEYI
LSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGL
AITFVSDEGDAKILNDVQDRFEVNVAELPEEIDISSYIEQSR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaggatgtggagaatgaattgttggactatgaggaggatgaagagcctcag
gcagtgactgatgcagcccctgtccccgctaaaaaggatgtgaagggctcttatgtttcc
attcacagttctggcttccgagacttcttgttgaagccagaactgcttcgtgccattgtg
gactgcggttttgagcacccatcagaagtgcagcatgaatgcattccacaggcaatccta
ggcatggatgttttatgccaagccaaatcaggcatgggcaagactgctgtttttgtactg
gctacactgcagcagattgaaccgatggatggacaggtatcagtgttggtgatgtgtcac
acccgggagctggccttccagatcagcaaagaatatgagcgcttctccaagtacatgtct
gctgtcaaggtatcagtcttctttgggggcctttccatcaagaaggatgaagaggtgctg
aagaagaattgtccacatattgtggtggggaccccaggccgtattctagcacttgtgcgt
aacaagacactcaacctgcgcaatgtcaagcattttgtgttggatgaatgcgacaagatg
cttgaacagctggacatgcgccgagatgtgcaggagatttttcgactgaccccccatgag
aagcagtgcatgatgtttagtgcaaccctgagcaaagagatccggcctgtttgcaggaag
ttcatgcaggatcctatggaggtctttgtagatgatgagaccaagctgactttgcatggc
ctgcagcaatactatgtgaagctgaaggatacagaaaagaaccgcaaactctttgatcta
ctggatgtgctggagttcaatcaggttgtgatatttgtgaagtctgtgcagcgctgcatg
gcattagctcagcttctagttgagcagaacttcccagccattgctattcacaggggaatg
tctcaggaggagaggggtgcaggtatctcggtttgggagccctggcttatgcagattggg
ctggatgagagattgagtccaacatctggaggcctggactcccctttctctgagtacata
ctctcgagataccagcagttcaaggacttccaacgtcggatcttggtggccactaatttg
tttggccgtgggatggacatagagagggttaacatagtattcaactatgacatgcctgag
gattccgatacctatttgcacagggtggcacgggcaggccgctttggcacaaaaggtttg
gccattacatttgtgtcagatgaaggtgatgccaaaatcctcaatgatgtgcaggaccgt
tttgaagtcaatgtggctgagctccctgaagagatagacatctcctcatatattgagcag
agccggtag
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