Sceloporus undulatus (fence lizard): 121921312
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Entry
121921312 CDS
T07740
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sund01009
]
121921312 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121921312 (HDAC6)
04131 Membrane trafficking [BR:
sund04131
]
121921312 (HDAC6)
03036 Chromosome and associated proteins [BR:
sund03036
]
121921312 (HDAC6)
Enzymes [BR:
sund01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121921312 (HDAC6)
Protein phosphatases and associated proteins [BR:
sund01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121921312 (HDAC6)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121921312 (HDAC6)
Membrane trafficking [BR:
sund04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
121921312 (HDAC6)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
121921312 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
121921312
NCBI-ProteinID:
XP_042305149
LinkDB
All DBs
Position
2:187952785..187993848
Genome browser
AA seq
1100 aa
AA seq
DB search
MASDLGNACILDPPSVPHVEPQVPQKKINRKGGLPEAKRKGRAKRQNKDAEELLMGMQRL
DLITECTVPVGTGLVLDERMTKFYCPWDESFPECPERLVAIQDKLLQCGLLERCVSVLAQ
EISEEEILLAHSQEYLALMKSTKTMSEDELRSLSDTYDSVYLHPNSYHCACLAAGSVLQL
VKKVLSGELRNGLAVVRPPGHHAQHNKMDGYCMFNSVGIAAQYARQKLGVERVLIVDWDV
HHGQGTQYLFEDNPSVLYFSIHRYEGGNFWPHLLESDSHAVGRGRGEGYNINVPWDQIGM
RDADYLSAFLHILLPVALEFQPQLVLVAAGFDSVIGDPKGEMSTTPGCFAHLTHLLMLLS
GGKLVLSLEGGYNLQSLAEGTCTVLKALLGDPCPLLESPLTPCSSALLSVSQTLAVHSKY
WKSLRRISVDVPQANGGELSEVLQPASPASLNEILSKSAAELMRSQPPSRTGLVYDEKMT
EHYNMWDSQHPELPQRVSRIFQRHGELRLTERCCRLPARLASEEELRMCHSLAYVETVKS
TATMKPRDLHRQGDQYNSIYICTSSYECARLAAGSAFSAVEAVLSQKVQNAVAIVRPPGH
HAESDTACGFCFFNSVALAARYAQRLAGRPMRVMILDWDVHHGNGTQHMFENDPSVLYVS
IHRYDNGTFFPTSDDADYDRVGLGPGKGFTLNVPWNCPRMGDPEYLAAFHQIVMPVGYEF
NPELVLVSAGFDAARGDPLGGCLVTPECYAYMTHLLLGLAGGKVVVVLEGGYNLESISES
MTMCTRSLLGDPPPTMGRLKVPHPSALQSLACVASVHRKYWTSLRLEVPAPLWEKPRTRA
GKGTPIADEFPIKPPQELFQSPITQPGKTDDDVVLALSSLQIEDKPVEEGDTASSSLSPA
SSSVGEEAQPKVGGSSEETEPADDSQRESMSTGSSSGDVESSDKEAEVSPPNQPPQTVEV
EIELLDEATGGCSSFCKKLEDNLEDGGLFYAVTPLPWCPHLESVLPVPPAGLSVLEPCSE
CGSIAENWVCLVCYKVCCGRYINQHMLAHNSESGHPLVLSFADLSAWCYECQAYVHHPTL
FEAKSLAHKMKFGVDMAAPS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagatttgggaaatgcctgcatattggatcctccatctgtgcctcatgtggag
cctcaggtaccacagaaaaaaattaataggaagggaggtttgccggaggccaagagaaaa
ggacgggccaagcggcagaacaaagatgcagaggaactgctcatgggcatgcagcggttg
gatctcatcacagaatgcacagtgccagtagggacaggcctggttttggatgagcggatg
acaaagttttactgcccatgggatgagagtttcccagagtgtccagaacggctggtggcc
atccaagacaaattgctgcaatgtggactgctggagcgttgtgtctcagtgctggctcaa
gaaatttcagaggaagagattctcttggctcacagtcaggagtacctggcactgatgaaa
tcaactaaaacaatgagtgaggatgagctaagatctctgtcagatacgtatgattcagtc
tatctgcatccaaattcctaccactgtgcctgccttgctgctggatccgtcctgcaactt
gtgaagaaggtgttgtctggggagctccgtaatgggcttgctgtggtcaggccacctgga
caccatgctcagcacaacaaaatggatggctactgcatgttcaacagtgtaggcattgca
gcccaatatgcccggcagaaattgggagtagagcgagtgcttattgttgactgggatgtg
catcatggacaaggcacccagtacctatttgaagacaatcccagtgtcctttatttctcc
atccatcgttatgaagggggcaacttctggccacaccttctggaatctgacagtcatgct
gtgggcagaggtcgcggagaggggtacaatatcaatgtgccatgggaccagataggaatg
cgagatgctgactacctctctgcctttttgcacatcctgctacctgtggccttggagttt
cagccccagctggtactggttgctgctggttttgactctgtaattggtgaccccaagggg
gaaatgtctaccactccaggatgctttgctcatttgacacatctgctgatgcttctctct
ggaggcaagctggttctgtctctggagggtggatacaatctccagtccttggcagaggga
acctgcacagtcctcaaggctcttctaggagacccctgccctctgctggaatcacccctc
acaccttgcagcagtgcccttctctctgtgtcccagacccttgcagttcacagcaagtat
tggaagagcttgaggaggatcagtgttgatgtgcctcaggcgaatggaggagaactaagt
gaagttttgcagccagccagccccgcatcattaaatgagatcctgtccaagtcagcagct
gaactgatgcgatcccagccaccttcacggacagggctggtctatgatgaaaagatgaca
gagcattacaatatgtgggacagtcaacatccagagctgcctcagagagtttcccggatt
ttccagcgccatggggagctacgtctcacagaacgatgctgtcggctcccagctcggctt
gcctcggaagaggagttgcgaatgtgccacagcctggcctatgtagagacagtgaagtca
acagccaccatgaagccccgcgacctacatcgccagggtgaccaatacaattccatctac
atctgcaccagctcctatgaatgtgcccgcctggcggctggttctgccttcagtgcagtt
gaggctgtactgtctcagaaggtccaaaatgctgtggccatcgtccgaccacctggacac
catgctgaatcagacaccgcctgtggcttctgcttcttcaactctgtggccttggctgct
cgatatgcacagcgcctggctgggcggcctatgagggtgatgatactagattgggatgtt
caccatggcaatgggacacagcacatgttcgaaaatgatcccagtgtcctgtatgtttcc
atccaccgctatgacaatggaactttcttccctacgtctgatgatgcagactatgaccgg
gtgggcttaggacctggcaagggcttcacccttaatgtgccttggaactgccctcggatg
ggagaccctgagtacttggctgccttccaccagattgtcatgcctgttggctatgagttc
aatccggagctagtcctggtttctgctggttttgatgctgctcggggagatccgctgggt
ggatgccttgtgacccctgaatgttacgcatacatgacccacctgctcttggggctggca
ggaggcaaggtggtggttgtgttggagggtggctacaacttagaatccatttcagagtcc
atgaccatgtgcacccgcagcctcctgggggaccctccccccaccatgggacgcctaaag
gttccccaccccagtgctctgcagtctttggcctgtgtagcatctgtgcaccgcaagtac
tggacaagcctccgactggaagtgcctgctcctttgtgggagaagcccaggactcgggct
ggtaagggaactcccattgcagacgaattccccataaagcctccgcaggagttgtttcag
agccccataactcaacctgggaagactgatgatgatgtggttctggctttgagctccctc
caaatagaggataaacctgtggaggaaggagacacagcttcaagctctctctcacctgcc
tccagttcggtgggtgaagaggctcagccaaaggttgggggctcctctgaagagactgag
ccagcagacgatagccagagagaaagcatgtcaacagggagttcctctggtgatgtggag
tcctcagacaaagaggcagaagtgagtccacctaatcagccccctcagacagtggaagtt
gagattgagctacttgatgaagccacaggtggctgttcttccttctgcaagaagcttgaa
gataatttggaagatggagggctgttctatgctgtaacccccttaccatggtgcccacat
cttgaatcagtgttacctgtgcctcctgctggtctgagtgtgctggagccttgttcagaa
tgcggcagcatagctgagaattgggtctgcctggtttgctacaaggtttgctgtggccgc
tatattaatcagcacatgttagctcacaattcagaatcggggcatccactggtgctcagc
tttgcagacctctctgcctggtgctatgaatgccaagcctatgtccaccacccgactctc
ttcgaagccaagagcctggctcacaaaatgaagttcggagtggacatggctgcaccttcc
taa
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