Sceloporus undulatus (fence lizard): 121921456
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Entry
121921456 CDS
T07740
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121921456 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121921456 (TNPO1)
03009 Ribosome biogenesis [BR:
sund03009
]
121921456 (TNPO1)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121921456 (TNPO1)
Ribosome biogenesis [BR:
sund03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121921456 (TNPO1)
Pre-60S particles
121921456 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
IBN_N
TOR1L1_N
Vac14_Fab1_bd
TPR_IPO5
HEAT_EF3_N
Cnd1
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
CEP104-like_TOG
MMS19_C
HEAT_GCN1_C
INTS7_N
Dopey_N
HEAT_GCN1_C_2
UNC45-central
RTP1_C1
ARM_TBCD
TPR_TTI1_C
VPS15-like_hel
DUF3689
Motif
Other DBs
NCBI-GeneID:
121921456
NCBI-ProteinID:
XP_042305520
LinkDB
All DBs
Position
2:288354831..288406360
Genome browser
AA seq
890 aa
AA seq
DB search
MEYEWKPDEQGLQQILQLLKESQSPDTTTQRAVQQKLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDALDRPLNIMIPKFL
QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDAFIENLFALAGDEEPEVRKNVCRALV
MLLEVRMDRLLPHMISIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLCRHLTKL
IPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQQHEEDGIEEDEEE
EDELDDDDTISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
FISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMITVNPSGVVQDFIFFCDAVA
SWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPVPLKERLAAYYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgagtggaagcccgacgagcaggggctccagcagatcctgcagctcctcaag
gagtcccagtccccggacaccaccacgcagagggccgtgcaacaaaaactggaacaactc
aatcagtatccagacttcaacaactacctgatctttgttcttacaaagctaaaatctgaa
gatgaacctacacggtcattgagtggtcttattttgaagaataatgtgaaagctcacttt
cacaattttcctaatggagtaactgacttcattaaaagcgagtgtttaaacaatattggt
gactcctctccactaatcagagccaccgtaggtatcttgattacaactattgcctcaaaa
ggagaattgcagaattggccagaactcttaccaaagctttgtagcctgctagattctgag
gactacaatacttgtgagggtgcatttggagctcttcagaaaatttgtgaagattctgct
gaaattttagacagtgatgcattagaccgaccactcaatatcatgatcccgaagtttttg
cagttcttcaagcatagcagtccaaaaataaggtcccatgcagttgcttgcgttaatcag
tttatcattagtcgaactcaagcccttatgttgcacatagatgcatttattgagaatctg
tttgcattagctggtgatgaggagcctgaagtacgtaaaaatgtatgtcgggctctggtg
atgttgcttgaagttcgaatggaccgcttgcttcctcatatgattagtattgttgagtat
atgctacagaggacacaagaccaagatgaaaatgtagctttggaggcatgtgagttttgg
ctgacattggctgaacagccaatttgtaaagatgtattatgtcggcatcttaccaagttg
atacctgttttagtaaatggcatgaaatactcagaaattgatattattctactgaagggt
gatgttgaagaagacgaggcaatcccggatagcgaacaagatattaggcctcggtttcac
cgttcacgaacagtagcacagcagcatgaggaagatggcattgaagaggatgaggaggag
gaagatgagctggatgatgatgacactatttcagactggaatttaagaaaatgttctgct
gctgcccttgatgttcttgccaatgtattccgtgatgaactgctgccacacatattgccc
ctcctaaaagaattgctctttcatcctgagtgggtggtgaaagaatcaggcatcctggtt
ctgggagcaattgctgaaggttgcatgcagggtatgattccatatcttcccgagctaatc
cctcacctcattcagtgcctctctgataaaaaggctcttgtgcgctccattacttgctgg
actcttagccgctatgcacactgggttgttagtcaacctccagatacgtacttgaagcca
ttaatgactgagttgctaaagcgtattcttgatagcaacaaaagagtacaagaagctgcc
tgcagtgcctttgctactctagaagaggaggcttgtacagaacttgttccttaccttgct
tatatacttgatactcttgtcttcgcatttagtaaataccagcataagaatctgctcatt
ctttatgatgccataggaactttagcagattctgtaggtcatcatctaaacaagccagaa
tatattcagatgcttatgcctccactaatacaaaaatggaacatgttgaaagatgaagat
aaagaccttttccctttattagagtgcctatcttcggttgccactgccttgcaatctggc
ttccttccatactgtgaaccggtgtaccagcgctgtgtaaacttggtacagaagactctt
gcacaagccatgttgcacaatgctcaaccagatcagtatgaagctccagataaagacttc
atgattgttgctcttgatttacttagtggtttagctgaaggacttggaggcaacattgaa
cagcttgtggctcggagcaatatactcacacttatgtaccagtgtatgcaggataaaatg
cctgaggtacgacagagttcttttgctttgctaggtgatctgacaaaggcatgttttcaa
catgtgaagccctgcattgctgatttcatgccaattttaggaaccaacctaaatccagag
ttcatttctgtgtgtaacaatgccacttgggcaattggagaaatttctattcagatgggt
atagagatgcagccttatattccaatggtcttgcaccagcttgtagaaatcataaacaga
cccaacacaccaaagactttgttagaaaacacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctggtgcacctct
ctccgaaacataagggacaatgaagaaaaagattcagctttccgtgggatttgtaccatg
attactgtcaatcctagtggagtagtccaagactttatatttttttgtgatgctgttgca
tcatggattagcccaaaagatgacctccgggacatgttctgtaagatccttcatggattt
aaaaatcaagttggagatgaaaattggaggcgtttctctgaccagtttcctgttccctta
aaagagcgccttgcagcttactatggagtttaa
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