Sceloporus undulatus (fence lizard): 121921513
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Entry
121921513 CDS
T07740
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121921513 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sund02000
]
121921513 (ABCA5)
Transporters [BR:
sund02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
121921513 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
nSTAND3
Rad17
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
121921513
NCBI-ProteinID:
XP_042305629
LinkDB
All DBs
Position
2:153936844..154004351
Genome browser
AA seq
1657 aa
AA seq
DB search
MSTETLRQKGVWRQTRALLYKNCLVKWRTKKSSVQEVLLPLFFLFWLTLMSMMYPNKKYD
EVPDSDSYSVDHSSISEFIVGYTPANEMTRKIMHKMSAEYFTEGIITEEFLSEQEMQEAS
VRSPRNFVGIIFMDSVSYQLRFPPEKVPVSAIHVESRASCPRPSKLCEAEKYWHYGFTAL
QMCIDAAIIQLKTNHSVLEDLEQTKAIMMGESAIMEIDNSPRAIILIYLVIAFSPFGCYL
AIHIVAEKEKKLKEFLMIMGLHDTAFWLSWVLLYTSLIFVMSLLMSIIATFSWLFPKSSS
FVIFLLFFLYGISSVLFAFMLTPLFKRSKHVGTVEFLSTLTFGFVGLTIVLLEDFPKSFV
WFLSPLCQCTFLVGVAQVMHLEDYEEGAVFSNLSHGPYPLVIALMLLALDSMLYLLLAVY
LDQVIPGEYGLRRSIFFFLKPSFWTKRTRNYKELYEGSINGNLDFSEIIEPVSSEFQGKE
AIRINCVQKSFAKKGETVEALKSLTFDIYEGQITALLGHSGTGKTTLMNILCGLCPPSDG
FASIYGYKVSEIDEMLDARKITGVCQQLDIYFDVLTVQENLSIVASIKGIPPNDMIQEVQ
KVLLDLDMQPIKDNQAKKLSGGQKRKLSIGIAILGDPKVLLLDEPTAGMDPCSRHTVWNL
LKNRKASRVTVFSTHFMDEADIIADRKAVISQGMLKCLGSSLFLKSKWGIGYRLSMHIDR
YCNTEGTASLIRQHIPEASLLKQNEEQLVYALPFKDMDKFSALFADLDIHSHLGVISYGV
SMTTLEDVFLKLEAEAEIDQADFSVFSPEQAGEEMDTTSISELEQSLLMLSETKSSTLSN
KSLWKKQVFTMAKVHFLNLKREIKSVTAVFLLFTIFLVMQISMFIIHNYFKNAVVPIKLS
PDLYFLKPNETHHKYKTSLLIQNTTDANIDDIIRSLKNQNILTEIVNGSDYGSADSQSTA
FNSSGYVAFAPHSAALKVLSLDKNYVFTAAFNRTMVHSLPVMMNIISNLYLHKLNVTETI
HVWSNPFFQEITDIVSTLVLYIEALLLGVIVTGMPPYFAMENAENHKIKAYTQLKISGLY
PSAYWCGQALVDIPLFYFILLLMIGSLFVFHHGVYLFPEKFLAVVFCLIGYVPSVVLFNY
VVSFTFNAIQNTKEFWSFVFSVAALVCSIVIEIAFFMWHYTAAAVLHTCFSVFVPIYPLI
GCLISFIKIARKLDHKMERNSERLLVSVVAPYLQCVIWLFLLRYLEVKCGGRSMREDPFF
RGPVKLKPWKFPDVPHDEDEDEDVMAERLRVKEMTTCQSCEEKPAILVSSLHKEYDEKKD
FLLGRKIKKVATNHVSLCVKRGEILGVLGPNGAGKSTLINILVGEVEPTSGQVLMGDYSL
GESNEESSKRFVGYCPQTNPLWPDITLQEYFEIYGAIKGMSESDMKEVIKCISSALDFKE
HLQKRTKKLGAGIKRKLCFALSMLGNPYITLLDEPSTGMDPKAKQHMWKAIRAAFKSKQR
AAILTTHYMEEAEAVCDRVAVLVSGKLRCIGTVQHLKSKFGRGYFLEIKLKQVPDIQKKE
YLQREILHIFPNGIHQESFASILAYKIPREDVHSLALCFSRLEEAKHAFDIEEYSFSQAT
LEQVFVELAKEQEEEDSFGTLNTTLWWERAQAERVVF
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagagaccttaagacaaaaaggtgtgtggcgacaaaccagagctcttttatat
aagaactgtctagtaaaatggaggactaaaaagagtagtgttcaggaagtacttcttcca
cttttcttcttattttggttaacattaatgagcatgatgtatccaaacaagaaatatgat
gaggtgcctgattctgattcttattctgtggaccactccagtatctctgagtttattgtt
ggctacacaccagcaaatgaaatgacaagaaaaatcatgcacaagatgtctgcagaatat
tttacagagggaataattacagaagagtttttaagtgagcaagaaatgcaggaagctagt
gttcgtagtccccgaaactttgtgggcataattttcatggattctgtgtcctaccagctc
agatttcctcctgaaaaggttccagtatctgcaattcacgtggaatcaagagctagttgt
ccaaggccttccaagttatgtgaagctgaaaaatactggcactatggatttacagctcta
cagatgtgcattgatgcagcaattatacagctgaagactaatcattctgttttggaagac
ctggaacaaacaaaagctatcatgatgggagaatctgccattatggaaattgataattct
cctcgggcaataattttaatttacctagtaattgccttttcaccctttggttgttatttg
gcaatacatattgtggcagaaaaagaaaagaaattgaaagagtttttaatgatcatgggg
cttcatgacactgctttttggctttcttgggtcctactgtacaccagtctgatatttgtc
atgtcccttctcatgtcgatcattgcaacattctcttggctctttcctaaaagtagcagc
tttgtgatctttctgctttttttcctatatggaatatcctccgttttatttgcgtttatg
ttgactcctcttttcaaaagatcgaaacatgttggtacagttgaatttttgtcaaccttg
acttttggttttgtgggcctgacgatagtgctattggaagattttccaaagtcgtttgtg
tggttcctcagccctctgtgtcagtgcacatttttagttggtgttgcacaggttatgcat
ctagaagattatgaggaaggagctgttttctcaaatttatctcatggtccatatccacta
gttattgctcttatgctactggcccttgacagtatgctttatctgctcctggcagtatat
ctggatcaggttattccaggagaatatggattgcgacgcagcattttcttcttcctaaaa
ccctcattttggacaaaacgaactaggaattataaggaattatatgagggtagcattaat
ggaaacttagacttcagtgaaatcattgaacctgtatcttctgaatttcagggaaaggaa
gctatcagaatcaactgtgtccagaaatcttttgctaaaaaaggtgaaaccgtggaagct
ctgaaaagtttaacctttgacatatatgaaggtcagatcacagcattgcttggacatagt
ggaacgggaaaaacaacattaatgaacattctttgtggattgtgcccaccttctgatgga
tttgcatcaatttacggatataaagtatctgaaatagatgaaatgctagatgcaagaaag
ataactggagtatgccagcagttagacatatattttgatgtcttaacagtgcaagaaaat
ttatcaatagttgcttcaattaaagggatacctcctaatgatatgatacaagaggttcag
aaggttttgcttgatttggatatgcagcccattaaagataaccaagccaaaaagctaagt
ggaggacagaaaagaaaactgtcaattggaattgcaattcttggagatccaaaggtatta
cttttggacgaaccaacagccggcatggacccatgctctcgacatacagtttggaacctt
ctgaaaaacagaaaagccagtcgagtgacagtgttcagtacccatttcatggatgaagca
gacattattgcagataggaaagctgtgatctcccagggaatgctgaaatgtcttggctcc
tctctcttccttaagtcaaaatggggaattggctaccgactgagtatgcacatagacagg
tactgtaacacagaaggaacagcttctttgatcagacagcatattcctgaggccagcttg
ttgaaacagaatgaagagcaacttgtgtatgccttgcctttcaaagacatggacaagttt
tcagcattgtttgctgatctagacattcattcccatttgggtgttatttcctatggtgtt
tccatgacaactttggaggatgtgtttctcaagctggaagcagaagctgaaattgaccaa
gcagatttcagtgtgtttagcccagagcaagctggagaggaaatggataccacatccatc
agtgagttagagcaaagcttactgatgctatctgagacaaaatcttctacactaagcaat
aaatccctctggaaaaagcaggtgtttacaatggcaaaggttcacttccttaacttgaaa
cgtgaaatcaagtcagtgacagctgtgttcttgctatttacaatatttcttgttatgcag
atttctatgtttattatacataattacttcaaaaatgctgtggtccctatcaaactctcc
ccagacttatactttcttaaaccaaatgaaactcatcataagtacaaaactagtctcctc
attcaaaacaccactgatgccaatattgatgacatcatcagatctctcaagaaccagaat
atactgacagagatagtcaatggcagtgattatggatcagctgattcccagagtacagca
tttaacagcagtggttatgtggcatttgctccacacagtgcagcattgaaagtgttaagt
ttagacaagaactatgtttttacagctgcttttaaccgtaccatggtacattctttgcct
gttatgatgaatatcattagtaacctgtatctgcacaaattaaatgtgactgaaactatc
catgtctggagtaacccttttttccaagaaattacagatatcgtctccacattagtactg
tacattgaagctctgttgctaggagtcattgtaactgggatgccaccatattttgccatg
gagaatgcagaaaaccataagatcaaagcctatactcagctgaagatctcaggtctttat
ccttctgcttattggtgtggacaggcactagttgacattccattattttactttattctt
ctccttatgataggaagtttatttgtatttcaccatggagtttatctttttcctgagaaa
tttcttgcggtggttttttgccttattggctatgtaccatcagtagttctgttcaattat
gttgtctctttcacctttaatgctatacagaacaccaaagaattttggtcattcgttttt
tcagtggcagccttggtttgttcaattgtcattgaaatagctttctttatgtggcattat
acggcagctgctgttcttcatacttgtttttctgtctttgttccaatctatcctcttatt
gggtgtctgatttcttttataaagatagcccggaagcttgatcataagatggaaagaaat
tcagaaagattgttggtgtcagtagtagcgccttatttacaatgtgtgatttggctcttt
cttctgcgctaccttgaggtgaaatgtggaggcagatcaatgagagaagacccgtttttc
agaggtcctgtaaaactcaagccctggaaatttccagatgtgccacatgatgaggatgag
gatgaggatgttatggctgagagattgagagttaaagagatgacaacctgccagagctgt
gaggagaaaccagccattttggtcagcagtttacataaagaatatgatgaaaagaaagat
tttcttctcggaagaaaaataaagaaagtggcaactaaccatgtctctctttgtgtgaaa
agaggagaaatattgggagtgttaggtcccaatggagctgggaagagcacactgatcaat
attctagtgggggaagtagaaccaacctcaggccaggtgctgatgggagattattcttta
ggtgagagtaatgaggagagttccaaaagatttgtgggatactgtccacagacaaatcca
ctttggcctgatatcacattgcaggagtattttgaaatttatggtgcgatcaaaggaatg
agtgaaagtgacatgaaagaagtcataaaatgcatttccagtgcacttgactttaaggaa
catctacagaaaagaacaaagaaacttggggcaggcattaaacgaaagttatgttttgct
ttaagtatgcttggaaacccttatattactctactagatgagccatctactggtatggac
cctaaagcaaaacagcacatgtggaaagcaattcgagcagcttttaaaagtaaacagaga
gcagctattctgacaacccattatatggaagaagcagaggctgtgtgtgatcgggtggca
gtcttggtgtctggaaaattaaggtgtattgggacagttcaacacctcaagagtaaattt
ggcagaggatatttcttagaaattaaattaaaacaagtgccagatatacagaagaaggag
tatcttcagagggagattttgcacatctttccaaatggaattcatcaagaaagttttgcc
tcaattttggcatataaaattccaagggaggatgtccattcccttgcactatgtttttcc
agactggaggaagcaaagcatgccttcgatattgaggagtacagcttctcccaagcaaca
cttgaacaggtgtttgtggaacttgccaaagagcaagaggaggaagacagctttggaaca
ctaaacaccacgctttggtgggaacgagcccaggcagagagagttgttttctga
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integrated database retrieval system
