Sceloporus undulatus (fence lizard): 121921596
Help
Entry
121921596 CDS
T07740
Symbol
HNRNPA1
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121921596 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121921596 (HNRNPA1)
03041 Spliceosome [BR:
sund03041
]
121921596 (HNRNPA1)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121921596 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
121921596 (HNRNPA1)
Spliceosome [BR:
sund03041
]
Common components
Common spliceosomal components
hnRNP proteins
121921596 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
121921596
NCBI-ProteinID:
XP_042305829
LinkDB
All DBs
Position
2:complement(173964069..173971680)
Genome browser
AA seq
378 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYSTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASATSSQRGRSSSGSFGSGRGGGFGGSDNFNRSSNFGGRGGFGSRGGGGGGGGG
GGYGGSGDGYNGFGNDGYGGSGSGYSGGSRGYGSSSSYDGYNNGGGGFGGGSGGSNFGGG
GNYNDFGSYNNQSSNFGPMKGGNFGGRSSGPYGGSGGNKALAGEESQRIDREATGYHXVV
NSAKHSCGRVELPHEDMC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtctgagtccccaaaggagcctgagcagctgcgtaagctgttcattggtggc
ctcagttttgagacgacagatgagagccttcgcaatcattttgaacaatgggggacgctt
acagattgtgtggtaatgagagatccaaatactaagcgctccaggggctttggatttgtc
acttactcaacagtggaggaagttgatgctgccatgaatgccaggccgcacaaagttgat
ggtagagttgttgaaccaaaaagagctgtatccagagaggattctcagaggcctggagcc
cacttaacagtgaagaaaatctttgttggaggaattaaggaagacacagaggagcaccac
ctgagggactacttcgaacagtatggcaaaattgaagtcattgagataatgacagatcgt
ggcagtggcaaaaagaggggatttgcctttgttacttttgatgaccatgactctgtggac
aagattgtcattcagaaataccatactgtgaatgggcataactgtgaagtcagaaaagct
ttgtcaaaacaggaaatggccagtgctacttcaagtcaacgaggccgcagtagttctggc
agctttggcagtggacgcggaggtggatttggtggcagtgacaacttcaaccgtagcagc
aactttggtggccgtggtgggtttggcagccgtggtggtggaggaggaggtggaggaggt
ggtggttatggaggcagtggagatggctataatggatttggcaatgatggctatggaggt
agtggctctggatattctggaggaagcaggggttatggcagcagtagcagctatgatggc
tataacaacggaggtggtggctttggtggtggcagtggaggaagcaacttcggaggtggt
ggaaattacaatgactttggcagttacaataaccagtcttcaaattttggacccatgaaa
ggaggaaactttggaggcaggagctctggcccatatggtgggagtggtggaaacaaagct
ttagcaggagaggagagccagagaattgacagggaagctacaggttaccacnnagttgtg
aactcagccaaacacagttgtggcagggtagaactgcctcatgaagacatgtgttag
DBGET
integrated database retrieval system
