Sceloporus undulatus (fence lizard): 121921663
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Entry
121921663 CDS
T07740
Symbol
CDRT1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein isoform X1
KO
K10266
F-box and WD-40 domain protein 10
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sund04121
]
121921663 (CDRT1)
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121921663 (CDRT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_SCAP
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
F-box
F-box-like
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
121921663
NCBI-ProteinID:
XP_042305976
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Position
2:129715857..129755090
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AA seq
1102 aa
AA seq
DB search
MKTRPPVEPVVPEILEYKLEYTPDLRCEKQTDLVPVCHNCKSCILSWKTFSTREWFVRAS
HASQRQFLVGIIKRFKSQDLLNYAWNLLRPTNAKDFTYSRSCVSSSFMVSSTLDRALDPQ
KLEQSMASLWKWFLHASFWTKANYLLLLLQMCDSQLLLMAASLIRILLSQDGNFTLKKEE
SALTDETVVPKDQAKSASQVTNHLASQSACFSSGMESCHTSERSGIFAHLHVQRAWSKES
DQLSGDISEGMDDDEPRLSVVLNVTTSTPISPQKAPSTSNFKDFIRCLPIHLSKRILRML
DQKSLHRCSSVSLHWDFLVKELKKDVTTNRSRRSGIAFLQGMCPKRPIGNYAKIVNVAIP
QINQNGDIIPVRSRSKIHKEFEHLHKAYHGQLTDSIKLEERNVFCSSYNVRVLIDSEDPN
TVIHYTGGKLVAYGSADRKIHLMNVADLKPVPPLLRGHAGSIRALYLNEQKGFLLSGSYD
LSIRMWTIFFGTCVKIFNGHSGSITCLDMYNNRFVSGSKDCTAKMWDIDTGKCLKTFAHK
GIVWAAKINETHVVSCCDRGAVKVWHAETFMLIKTLEGHLGPVKCLSFDNWHLVSGSNDG
YVLGWSMMGKHKRCLMAFRHPMEVLDLGFLYLRVISGCADGKIRIFNFLTGTCLRVMRAN
SRGNPVVSFCIAENKLLINAQGSVILFQFEEVDWDHTQTSERLMKRKDKSKVEDIPFRIK
PSPQSHSERQKRAKKNNWKLYSRDTDGTMLSQQSTQCSNAPPAPQYEIVKTPPPRARGSM
AALPMKSDKKQRLSFARKLESPESVPTLKGYSDDETGHDPPALVPFGQNAEAFIKYIKQK
RPLGLISNDQILLTISTMHHAYGSDQVSANMAYNMNIKDAWGPDHLQKNKSPKAWASSSA
KQEKMDPCTQLKRLKVAGGIVGMERISTPYETKTLQLNLKNSLLVDTVKSCIPPPSITRS
KSCTSLSGEKKVTGRAKIPSPPTTGGHIIGNFTTACGSIKVPRMKIGQPDTETSPRRGKL
LFAHIPNPYRMNIGFRLLTTQQMKEYEEEKISEYQANKTKVIANREKEVKSAWLRKIKGL
PIDDFIKEGKVAAPELGENVFI
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacccgccctccagtcgagccggtggtacctgagatcctggaatataaattagag
tataccccagacctacggtgtgagaagcaaacagacttggtgcctgtttgccacaactgc
aaatcctgtatcttgtcctggaagaccttctccacccgagaatggtttgtgcgggccagc
catgcttctcagaggcaattcttggtggggatcatcaagcggttcaaaagtcaagacctc
ttgaactatgcctggaacctgttacggccgacaaatgccaaagatttcacctattcacgt
tcctgcgtcagctccagcttcatggtctcatccaccttggatcgggcattggatcctcaa
aaattggagcagtccatggcaagcctctggaagtggttcttacatgccagtttctggacc
aaagccaattatttgctgcttttgctgcaaatgtgtgactcacagttgttgctgatggct
gctagcctgattcgtattttgttaagccaagatgggaatttcacattgaaaaaagaggaa
tcagccctgactgatgagacagttgtgccaaaggaccaggcgaaatctgcttcccaggtt
accaaccatcttgcatctcagtctgcttgcttttcatcaggcatggaaagttgtcatact
tcagagaggagtggtatatttgctcatctacatgtgcaaagagcttggtccaaagagtca
gatcagctctctggagacatatctgagggcatggatgatgatgagcctcgcctttcagtt
gtattgaatgtcacaacctctacacccatctctccccagaaagcccctagcactagcaat
ttcaaagacttcattcgctgcctgcccatccacctatccaagcgcatcttgcgtatgcta
gaccagaaatccttacacagatgttcctctgtgagtctacactgggatttcctggttaaa
gaacttaagaaggacgttacaactaatcgttcccgccgaagtgggattgcattcttgcag
ggcatgtgtcctaagagaccaattggcaactatgccaaaatagtcaacgttgccattcct
cagataaatcaaaatggtgacattatcccagtcagaagcaggagcaagatccacaaggaa
tttgaacacttgcataaagcttatcatggccaattgacagacagtatcaagttagaagaa
aggaatgtcttctgcagcagctataacgtccgtgttctaatagacagtgaggatccgaac
acagtgattcactatactggtggcaaattggtggcctatggttctgcagatcgaaaaatc
catcttatgaatgtggctgacctgaagcctgtcccacctcttcttcgtggacatgctggt
agcatccgggctctctacctcaatgaacagaaagggttccttctgagtggcagctatgat
cttagtatccgaatgtggactatcttctttggaacatgtgttaaaatttttaacggccac
tcgggaagcattacttgcttggatatgtataacaacagatttgtgtccggatctaaagac
tgcacagcaaaaatgtgggatatagacactgggaaatgtctcaagacttttgcacataaa
ggtattgtttgggctgctaaaataaatgagactcatgttgtgagttgctgtgaccggggt
gcagtgaaagtgtggcatgctgagacatttatgctgatcaagactttagaaggccactta
ggtcccgtgaaatgcctgtcatttgataactggcatcttgtgtcaggaagcaatgatggc
tatgtcttgggatggagcatgatgggaaaacataagagatgcctgatggcattcagacac
cctatggaggttctagatctgggatttctctatctcagagtcatcagtggctgtgctgat
gggaagatacgcatatttaacttcctgactggaacctgtctgagggttatgagagcaaat
agcagaggaaaccctgtggtgtctttctgtattgcagaaaacaaattactcatcaatgca
caaggcagtgttattttgttccagtttgaggaggtggactgggaccacacacaaacttct
gaacgactcatgaaaagaaaagacaagagcaaagttgaagacataccatttcgaattaag
ccatctccacagtcacactctgagaggcagaaacgagcaaagaaaaataattggaagctt
tacagcagagacactgatggcacaatgctttctcagcagtccacgcaatgctccaatgcc
cctccagctcctcagtatgaaatagtgaagacacctcctcccagggctagaggaagcatg
gcagccctgcccatgaagtcagataaaaaacaaaggctctcctttgccaggaagctagag
agtccagagtctgtaccaactctaaaaggttattctgatgatgaaacagggcatgaccct
cctgcccttgtcccctttggccagaatgctgaggctttcattaagtacataaaacagaaa
cgtcctcttggtctcatatcaaatgaccagatactcctcaccatcagcacaatgcatcat
gcctatgggagtgaccaggtcagtgccaacatggcctacaacatgaacattaaagatgct
tggggtcctgaccacctccagaaaaataagtccccaaaggcttgggcttcctcaagtgca
aaacaagagaaaatggatccttgcacccagctgaaacgactgaaggttgccggtggcatt
gtaggcatggaaaggatttccacaccttatgaaactaaaacactgcaactcaatttgaag
aactctttgcttgtagatactgttaagtcttgtattcctcctccctccattacacgctct
aagtcatgtaccagcttgtcaggagagaagaaggttactggccgtgccaagatcccatct
ccacctactactggggggcatatcattggtaattttacaaccgcctgtggatctatcaaa
gtaccacgaatgaagattggccaacctgatacagaaacaagtccacggcgaggaaaactc
ttatttgctcacataccaaatccataccgaatgaatatcgggttcagacttttgacaacg
caacaaatgaaagaatatgaagaagaaaagatatccgagtatcaggcaaacaaaacaaag
gtgatagcaaaccgagaaaaagaggtcaagagtgcctggttaagaaaaattaaaggcctt
cccatagatgacttcataaaggaaggcaaagttgctgcccctgaactgggagagaatgtt
ttcatttga
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integrated database retrieval system
