Sceloporus undulatus (fence lizard): 121921671
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Entry
121921671 CDS
T07740
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03020
RNA polymerase
sund03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121921671 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
121921671 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sund03021
]
121921671 (POLR2B)
03400 DNA repair and recombination proteins [BR:
sund03400
]
121921671 (POLR2B)
Enzymes [BR:
sund01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121921671 (POLR2B)
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121921671 (POLR2B)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121921671 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
121921671
NCBI-ProteinID:
XP_042306002
LinkDB
All DBs
Position
2:221478096..221508765
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDIMKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaggatatgcaatatgatgaggatgatgatgaaatcactccagac
ttgtggcaagaagcatgctggattgtcatcagctcctactttgatgaaaaaggcctcgtc
cgacaacagttggattcatttgatgaattcattcagatgtctgtgcagagaattgttgaa
gatgccccacccattgatctgcaagcagaagctcaacatgctacaggagaagtggaagaa
ccacctcgttatcttttgaaatttgaacaaatttacctatctaagcctacacattgggaa
agagatggtgccccttctcctatgatgccaaatgaagcaagactgagaaacctcacgtat
tctgctccattgtatgtggacataatgaaaacagttattaaagaaggtgaggaccagttg
cagacacaacatcaaaaaacatttataggaaaaattcctatcatgctgcgatccacatat
tgcctgctaaatggcttgactgaccgtgatctttgtgagctgaatgagtgccccctcgac
cctggcggctatttcattattaatggatcagaaaaggttctgattgctcaggagaaaatg
gctacaaacacagtatatgtgtttgcaaagaaagattctaaatatgcgtacacaggagag
tgtcgttcttgcctggagaattcttctcgacccacaagtactatatgggttagcatgctg
gccagaggtggacagggtgccaagaagagtgccataggtcagcgcattgtggcaacattg
ccatatatcaaacaggaagtccctatcattattgtctttcgtgccttagggtttgtctct
gacagagacatcttggagcatataatttatgatttcgaagatcctgagatgatggaaatg
gttaaaccttctttagatgaagcatttgtcatccaggaacagaacgttgccctgaatttc
attggttcaagaggtgcaaagcctggtgtaacgaaagaaaaaagaatcaagtatgcaaaa
gaagttttgcagaaggagatgcttccgcatgttggtgttagtgacttctgtgaaaccaaa
aaggcatattttcttgggtatatggttcataggctattgctggcagcgttagggagaagg
gaactggatgacagagatcactacggcaacaaacggctagatcttgcaggaccgttactt
gctttcttgttcagaggaatgtttaagaacttgctgaaagaagttagaatatatgcacag
aagtttattgacagagggaaggattttaacttggagctagcaattaaaaccagaattata
tcggatgggttgaaatactcattggctacaggcaactggggagaccagaagaaagctcac
caggccagagctggagtatctcaggtgttgaaccgactcacatttgcatctacactttcc
cacttgcgtcgcttgaattcccctatcggcagagatggtaaattggccaagcccaggcag
ctgcacaacaccttgtggggaatggtttgtcctgctgaaactccagagggtcatgctgtg
gggcttgtgaagaaccttgctctcatggcatatatctctgtgggatcccagccatccccg
attctggaatttttagaagaatggagtatggaaaaccttgaagaaatttctccagcagcc
attgcagatgctacaaagatctttgtgaatggatgctgggttggaatacacaaagaccca
gaacagcttatgaacacactgaggaaattgcgtcgtcagatggacatcattgtgtcagag
gtgtctatgatcagagatatcagggaacgagaaatccgcatttatactgatgctggaagg
atttgccgcccgcttctaattgtagaaaagcaaaagttgcttctgaagaagagacacatt
gaccaactgaaagaacgtgaatataacaactacagttggcaggacttggtggccagcggt
gtagtggaatacattgacaccttagaagaggagactgtcatgttggccatgactccagat
gacctgcaggagaaaggggttgcatactgttcaacttacacacactgtgagattcaccca
tccatgatcctaggggtctgtgcctctattatcccatttccagatcacaatcagtctcct
aggaatacataccagtctgctatgggcaaacaggccatgggtgtttatatcaccaacttt
catgtccggatggatacacttgcccatgtgctgtattatcctcagaaaccccttgtgact
acacgttctatggaatacctaagattcagagagttaccagcaggcatcaactctattgtg
gccatagcatcatacactggatataatcaagaagactctgtcatcatgaatcgttctgct
gtggataggggctttttcaggtctgtgttctatcgttcatacaaagagcaggaatccaag
aaaggattcgaccaagaagaagtgtttgagaagcctactcgtgaaacatgtcaagggatg
aggcatgccatctatgacaaactggatgatgatggtttgattgcacctggtgtgcgtgtg
tcaggagatgatgttatcattggcaagacagtaactttgccagagaatgaagatgaacta
gagagtacgaatcgccgttacaccaaaagagattgcagcactttcctacgcactagtgaa
actggcattgttgatcaagtcatggttaccttaaaccaggaaggatacaagttttgcaaa
atcagagtgcgttctgtaagaatcccacagattggagataagtttgccagcagacatggt
cagaaaggtacctgtggtatccagtacagacaagaggatatgcctttcacatgtgaagga
atcactcctgatataatcatcaatccccatgctatcccttcacgtatgaccattggtcac
ttgattgaatgtctgcaagggaaggtatctgcaaataagggagaaattggtgatgccaca
cctttcaatgatgcagtgaatgtgcagaagatttcaaatttgctgtctgattatggttac
catctgagaggaaatgaggttttgtacaatggcttcacaggtcgcaaaattacatcacag
atctttattggccctacttactaccaacgcttaaaacacatggtagatgataaaattcat
tcccgtgcgagaggaccaattcagatactaaacaggcaacctatggaaggtcgatcacgt
gatggtggtctccgttttggagaaatggaacgagattgtcagattgctcacggagcagca
cagttcttaagggaaaggttgtttgaagcatcagacccttaccaggttcacgtgtgcaac
ctgtgtggattaatggcaatcgcaaacaccaggacacatacatatgagtgcaggggctgc
cggaacaagacacagatttctctggtgagaatgccatatgcttgtaaactcctcttccaa
gagctgatgtcaatgagcattgcacctagaatgatgagtgtgtag
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integrated database retrieval system
