Sceloporus undulatus (fence lizard): 121922061
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Entry
121922061 CDS
T07740
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121922061 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121922061 (MBD4)
03400 DNA repair and recombination proteins [BR:
sund03400
]
121922061 (MBD4)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
121922061 (MBD4)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
121922061 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
2H-SAK
Motif
Other DBs
NCBI-GeneID:
121922061
NCBI-ProteinID:
XP_042306903
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All DBs
Position
2:complement(48047596..48060200)
Genome browser
AA seq
538 aa
AA seq
DB search
MEVQEATQLPNKKDGFSHGRKGDNEHVAEDEEEKRELAAEHLSPEKEEIETIQWKDDEAA
ASLSAPLCHKGVPEGWERIIKQRRTGKTAGKYDIYFVSPQGKKLRSKHALLDYFKKNKET
GLKLADFDFTVSVQKNTQRTKESSTITVRSEAENSHTRSQILDLGLQSSKREDTLQNKIL
PFQTTAGDLENISISLQGESTADDSSMDCNFKAKGKGTVGIRIQIKKTRNTSKNRNLDDG
QNKRQRIPSRKKQGVENSKKTRRKNKVCVPHLKDDILFSQPELEQHIEPIASLLGQKSGT
DVLNCDEGHSGVVPADENVSGLEMQRNLILPENQDLKIALSVDVSQTCDERCFTSVKESR
IRRTQVGRRKTSPYFSSKFSKEVPSPPKRKAFKKWTPPRSPFNLVQETLFHDPWKLLIAT
IFLNKTSGKMAIPVLWEFFKKYPSPTVARTADWKEISELLKPLGLYELRAKTIIRFSDEY
LVKQWKYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNIYHSWLRENYEKLNLNN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaagtgcaagaagcgacacagctccctaataagaaggatggatttagccacgggagg
aagggtgacaacgaacatgtggcagaagatgaagaagagaagagagaacttgcagcagag
cacctcagtcccgaaaaagaagagattgagaccatccagtggaaagacgatgaagcagct
gcgtctttatcagctcctctgtgtcacaaaggtgttccagaaggatgggaaaggataata
aagcaaaggcggactggaaaaacagcaggaaaatatgacatatattttgtcagtcctcag
ggaaagaagttgagatccaaacatgctcttctggattactttaaaaagaacaaagaaact
ggccttaaattagcggattttgattttactgtctctgttcagaagaatacacaaagaacc
aaagaatctagcactataactgtgagatcagaagcagagaactctcacactaggagccag
attctagatcttggactgcaaagcagtaaaagagaggataccctgcaaaataaaatattg
ccatttcaaaccactgctggagatctggaaaatatttctatctctttgcagggtgagtcc
actgcagatgatagctcaatggactgtaatttcaaagccaaaggaaagggtactgttgga
ataaggattcaaataaagaaaactagaaacacttcaaaaaatagaaatttggatgatggc
caaaacaaaagacagaggataccatcacgtaaaaaacaaggggttgaaaactctaaaaaa
acaagacgaaagaataaagtatgtgttccacacttgaaggatgacattctgttttcccag
ccagaactggagcaacacattgaaccaattgcaagtctcttgggacagaagtcaggcacg
gacgttttaaattgtgatgagggtcacagtggtgtagtaccagctgatgaaaacgtttca
ggactggaaatgcagagaaatttgatactgccagaaaaccaggacttaaagattgctctc
agtgtggacgtttcgcagacatgtgatgaaagatgttttacttcagtaaaagagagccgt
attcgaagaacacaagtgggaaggaggaaaaccagtccatatttttccagtaaattcagc
aaagaagttccaagcccacctaaaagaaaggcctttaaaaaatggactccacctcgttca
ccttttaatttggtccaagaaacactctttcacgatccatggaagcttcttatcgcaaca
atatttttgaacaagacttcaggaaaaatggccatccctgtgctatgggaatttttcaag
aaatatccttcaccaacagtagcaagaactgcagactggaaggaaatatcagagctcctt
aaaccactcggcctgtatgaactcagagcgaagaccatcatcagattttcagatgaatat
ttggtcaaacaatggaagtatcctattgagttgcatggaattggaaaatatggaaatgac
tcttacaggatcttctgtgtcaatgagtggaaagaggtacagccacaagatcataagctg
aatatatatcattcctggcttcgagaaaactacgaaaaactgaaccttaataattaa
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