Sceloporus undulatus (fence lizard): 121922231
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Entry
121922231 CDS
T07740
Symbol
LARS1
Name
(RefSeq) LOW QUALITY PROTEIN: leucine--tRNA ligase, cytoplasmic
KO
K01869
leucyl-tRNA synthetase [EC:
6.1.1.4
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121922231 (LARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sund01007
]
121922231 (LARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sund03016
]
121922231 (LARS1)
03029 Mitochondrial biogenesis [BR:
sund03029
]
121922231 (LARS1)
Enzymes [BR:
sund01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.4 leucine---tRNA ligase
121922231 (LARS1)
Amino acid related enzymes [BR:
sund01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121922231 (LARS1)
Transfer RNA biogenesis [BR:
sund03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121922231 (LARS1)
Prokaryotic type
121922231 (LARS1)
Mitochondrial biogenesis [BR:
sund03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121922231 (LARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ULD_3
RBD_LARS1
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
121922231
NCBI-ProteinID:
XP_042307298
LinkDB
All DBs
Position
2:complement(106371175..106438839)
Genome browser
AA seq
1177 aa
AA seq
DB search
MAERKGTAKVDFLKKIEKEIQQKWEDERAFEVNASDAASQKSSGKYFVTFPYPYMNGQLH
LGHTFSLSKCEFAVGYQKLKGKTCLFPFGLHCTGMPIKACADKLKREMELYGCPPEFPDE
EEEEEEEEDSKREEIVIKDKAKGKKSKAAAKTGSSKYQWGIMKSLGLSDKEIAKFSEAEH
WLDYFPPLAIRDLKNMGLKIDWRRSFVTTDVNPYYDSFVRWQFLTLRERNKIKFGKRYTI
YSPKDGQPCMDHDRQTGEGVGPQEYTLIKMKVVEPYPVKLSGLKAKNIFLVAATLRPETM
FGQTNCWVRPDMKYIGFETLSGDILICTQRAARNMSYQGFTKTNGVVPVVKELMGEDILG
AALSAPLTCYKVIYALPMLTIKEDKGTGVVTSVPSDSPDDIAALRDLKKKQAFRAKYGIK
DEMVLPFEPVPIIEIPGYGNLSAPLMCDELKIQSQNDREKLAEAKEKLYLKGFYEGVMLV
DGFKDQKVQDVKKLIQKKMVDNGEAMIYMEPEKQVISRSADECVVALCDQWYLDYGEEKW
KQQTYECLKNLETFCEETRRNFEATLDWLQEHACSRTYGLGTRLPWDEHWLIESLSDSTI
YMAFYTVAHLLQGGNLRGQGESPLGIRANQMSKEVWDYIFFKTAPFPTTKIPKETLDKLK
QEFEFWYPVDLRASGKDLVPNHLSYYLYNHVAMWPDQREKWPVAVRANGHLLLNSEKMSK
STGNFLTLSEAIQKFSADGMRLALADAGDTVEDANFVETMADAGILRLYTWVEWVKEMLA
NWDSLRSGPANTFNDRVFSSEINAGIMKTDQNYEKMMFKDALKTGFFEFQAAKDKYRELA
IEGMHRDLVLQFIESQTLLLAPVCPHVCEHVWALLGKTGSIMKALWPVPGPVDEVLIRSS
QYLTEAAHDLRLRLKSYMAPAKGKKSNKEVPQKPSHCTIYVAKNYPPWQHTTLSVLRKHY
QTSGGNLPDNKIIASELNSLPELKKYMKRVMPFVAMIKENLEKKGPRVLDLELEFDERTV
LRENIVYLTNSLDLEHIELKFASEGDEKIKEDCCPGKPFCTFRVEPGVSVCLVNPQPANG
HFSTKIEVRQGDGKDAIIRRLMKMDRGIKDLSRVKLMRFDDPLLGPRRVPILGKEDAEKS
PILDQAVFHIDLAEKRVHLTENGRTTDIGDTLVYIVN
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggaagggaacagctaaagtagatttcctgaagaagattgaaaaagaaatt
caacagaaatgggaagatgagagagcatttgaggttaatgcttcagatgctgctagccaa
aaaagcagtgggaaatactttgtcacctttccatacccctacatgaatggccagcttcac
ctaggacacacgttttctttatctaagtgtgagtttgcagttggataccagaaactaaaa
ggaaaaacctgcctatttccttttggactgcattgtactgggatgcccattaaggcctgt
gctgataaattgaaaagagaaatggagctttatggctgtccaccagaattccctgatgaa
gaagaagaggaggaggaggaggaggattccaagagggaagaaatagtcatcaaagataag
gctaaaggcaaaaagagtaaagctgctgccaaaactggctcttcaaaataccagtgggga
atcatgaaatctttaggcctttctgacaaagagatagcaaagttctcggaagctgagcat
tggcttgattacttcccacctttggccattcgagatttaaagaatatgggactcaagatt
gattggaggcgttcttttgttaccactgatgtcaacccctattatgattcttttgtacgg
tggcagtttctcaccctgagagaaagaaataaaattaaatttggaaagcgatatactatt
tattcaccaaaagatggacagccatgcatggatcatgacaggcaaacaggggagggtgta
ggacctcaagaatacactttgatcaaaatgaaggtggtagaaccttaccctgtgaaatta
agtggccttaaggcaaagaatatttttttggtagctgctactctcagaccagagaccatg
tttgggcagacaaattgttgggttcgccctgatatgaagtatattggttttgagaccctg
agtggggatattcttatttgcacgcagagagctgccaggaacatgtcctaccaaggcttc
acaaaaaccaacggagtagtacctgttgtgaaagagctaatgggagaggacattcttggg
gctgcactttctgctcctctaacatgctacaaagtcatctatgctcttcctatgttgact
attaaggaagacaaaggaactggtgtggtcacaagtgtcccatctgattctccagatgat
attgctgccctgagagacttaaagaaaaaacaggcatttcgagcaaagtatggtattaaa
gatgaaatggtcctcccgtttgaaccagtgccgataattgagatccctggctatggcaac
ctttctgctccattgatgtgtgacgagttgaaaatccagagtcaaaatgacagagagaaa
cttgcagaagccaaagagaaattatacttgaagggattttatgaaggcgtaatgcttgtg
gatggattcaaagaccagaaggtacaagatgtgaagaagcttattcagaagaagatggta
gataatggtgaagctatgatttatatggagccagagaaacaagtcatatctagatctgca
gatgagtgtgtggtggctctttgtgatcaatggtacttggattatggtgaagaaaaatgg
aagcaacagacttatgagtgcctgaaaaacctcgagactttctgtgaagagacaagaaga
aattttgaagctacgctagactggttacaggaacatgcctgttcaaggacctatggactg
ggtactcgtttgccttgggatgagcattggttgatagaatccctctctgattcgactatc
tacatggccttctatacagtggctcatctactacagggcggtaatcttcgtggacaagga
gagtctccgttagggatcagggcaaaccagatgtcaaaagaggtgtgggattacatcttc
tttaaaacagctccattccctacaacaaaaatcccaaaggaaactttggataaactcaag
caagaatttgaattttggtatccagtcgatctacgtgcttctggcaaggaccttgtacca
aatcacttgtcatactatctttataaccatgttgccatgtggccagatcaaagagaaaaa
tggcctgtagctgtgagagcaaatgggcatctccttctgaattcagagaagatgtctaaa
tctacaggcaattttcttactttgagcgaagccatacagaaattttctgctgatggcatg
cggctggcgttggctgatgcaggtgatactgtggaagatgcaaactttgtggaaactatg
gcagatgctggcattctccgcctgtacacgtgggtagagtgggtgaaggaaatgcttgca
aactgggacagtttaagaagtgggcctgccaataccttcaacgacagagtcttctccagt
gaaattaatgcaggcataatgaagacagatcagaactatgagaagatgatgtttaaggat
gctcttaaaactggtttctttgaatttcaggcagcaaaagacaagtaccgtgagctggcg
atagaaggaatgcacagggacttggtgctccagtttattgaatctcagacactcctgcta
gctccagtctgccctcatgtgtgtgaacatgtttgggcattgttaggcaagactggctcc
atcatgaaagctttgtggcctgtgcctggccctgtggatgaagtattgatccgctcatct
cagtacctcacagaggcagcccatgatctccgtttgcgactcaagagctacatggcacca
gctaaaggaaagaaaagcaacaaagaagtacctcagaagccatcccattgtaccatttat
gtggccaagaactacccaccgtggcagcacacaacactctctgttctgcgcaaacattat
cagaccagtggagggaatctaccagacaacaaaataattgccagtgagctcaattccttg
ccagaactgaagaaatacatgaaaagggttatgccctttgttgctatgattaaggaaaat
ctggaaaagaaagggccacgtgttcttgatttggaacttgagtttgatgagcggactgtc
ctcagggagaacatagtctacttgacaaattctctggatctagaacacatagaattgaag
tttgcttcagaaggagatgaaaaaattaaagaagactgttgtcctggaaaacctttctgc
acgttcagagtagaacctggtgtgtctgtctgtcttgtaaatcctcaaccagcaaatggc
cacttctctacaaaaattgaagtcaggcaaggagatggtaaagatgcaataatcaggcgc
ttgatgaaaatggacagaggaatcaaagatctttccagagtgaaactaatgagatttgat
gaccccctcctgggccctcgtcgtgttcccatacttggaaaagaagatgcagaaaagtct
cccattttagatcaagctgttttccacattgacctagcagaaaaacgggtccatctcact
gagaatggacggacgactgatattggggatacacttgtctatatagttaattag
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