Sceloporus undulatus (fence lizard): 121922256
Help
Entry
121922256 CDS
T07740
Symbol
CHD1
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sund03021
]
121922256 (CHD1)
03036 Chromosome and associated proteins [BR:
sund03036
]
121922256 (CHD1)
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
121922256 (CHD1)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
121922256 (CHD1)
SLIK complex
121922256 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
121922256
NCBI-ProteinID:
XP_042307394
LinkDB
All DBs
Position
2:275864294..275951278
Genome browser
AA seq
1791 aa
AA seq
DB search
MNGHSDEESARNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSDSESDTSKEKKVQAKPPKVDGAEFWKSNPSILAVQRSAMLRKQQQQQQSKAASSNSGS
EEDSSSSEDSADDSSNEIKRKKHKDEDWQMSGSGSVSGTASDSDLEESRDKSSCEESESD
YEPKIKVKSRKPPSRSSSQMGRKLEDXKKRQLESSSSSDDDYDKRGSRRQATVNISYKEA
EEAKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGATTTIYAVEADGDPNA
GFDKSKEPSDVQYLIKWKGWSHIHNTWETEDTLKQQNVRGMKKLDNYKKKDQETKRWLKN
ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWED
GALIAKKFQSRIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGQESLELRDYQ
LNGLNWLAHSWCKSNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSW
QREIQTWAPQMNAVVYLGDITSRNVIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGG
LNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF
SSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQY
YKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQNLIR
SSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQ
ALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK
QVNIYRLVTKGSVEEEILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPFNKEEL
SAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENETGPLSVGDELLSQFKVANFS
NMDEDDIELEPEQNSRNWEEIIPEVHRRRLEEEERQKELEEIYLLPRMRNCAKQVSFNGS
EGRRSRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPL
ERLDAIARDAELVDKSEIDLRRLGELVHNGCIKALKDSSPGQERAGGRLGKVKGPTFRIS
GVQVNAKLVMAHEEELSPLHKSIPSDPEDRKRYTIPCHTKAAHFDMDWGKEDDSNLLIGI
YEYGYGSWEMIKMDPDLNLTHKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQKL
SGAGGSKRRKMRAKKSKTIKAAKIKEETKSDTSPAPSDKSEEEEDEDSKDEIVSVKHSNK
KVKEKENEENLDSDLTMKKETDEKREAKENKREPKREKKEKEDKKELREKDIKEKRENKQ
KEYIQREKEVKEEKTNDIKHDSKEKSKKAPSSDIPVHITASSEPVPISEESEELDQKTFS
ICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWR
KNLWIFVSKFTEFDARKLHKLYKHAIKKRQETQQHNDQNVSSSINTHFIRNPDVERLKDN
TNHDESSRDSYSSDRHLPQYHDHHKDRLHGDSYKKGDSRKRSYSTFSNGKDHRDWDHYKP
DNRYYSDGKHRKLDEHRNRDHRSSLEGSLKDSRLHSDHRLPLDHRSSSDYSHHKSSRDYR
YHSDWQMDHRASSSGPRSPYDSRSPLGHRSPFEHSADHKSTPEHMWSSRKT
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagcgatgaagaaagtgcaaggaacagtagcggagaatcaagccagtca
gatgatgattctggttcagcatcaggttctggatctggttcaagttctggaagcagtagc
gatggaagtagcagccagtcgggaagcagtgattcagactctggttcagagtctggcagt
caatcagattcagagtctgacacatctaaggagaagaaagtgcaagcaaaacctccaaag
gttgatggagctgagttttggaaatcaaacccaagtattctggctgtacaaagatctgca
atgcttaggaagcagcagcagcaacagcagtcaaaagcagcatcctcaaatagtggctca
gaagaggactcatcaagtagtgaagactctgcagatgactcatccaatgaaatcaagaga
aagaagcataaagatgaagactggcaaatgtctggatcaggatctgtctctggaactgct
tcagattctgatttggaagaaagccgagataaaagtagttgtgaggagagtgaatctgac
tatgaaccaaaaatcaaagttaaaagcaggaagcctccaagcaggtcttcttcacaaatg
ggaagaaaattggaggactaaaaaaaaagacaacttgaatcatcatcgtcatcagatgat
gattatgataaaagaggatctcgccgtcaggcaactgtaaatattagttacaaagaagca
gaagaagcaaagacagattcagatgatctactggaagtctgtggagaagatgtcccacaa
cctgaagaagatgaatttgaaactattgaaaaatttatggatagccggattggacgaaaa
ggagcaactggtgctacaactactatttatgcagttgaagccgatggagatccaaatgca
ggatttgataaatcaaaagaacctagtgatgtgcagtatttgattaaatggaaaggttgg
tcccacatccataacacttgggaaactgaagatactctgaaacagcagaatgttagagga
atgaagaagctggacaactacaagaaaaaggatcaggagaccaaacgatggttgaaaaat
gcttctccggaagatgtggaatattataactgccagcaagaactcacagatgacttacat
aaacaatatcaaatagtagagcgaataattgctcattctaatcagaagtcagcagcaggt
tatccagattattactgtaaatggcaaggccttccttattcagagtgcagctgggaagat
ggtgctctcattgcaaaaaagtttcagtcacgcattgatgaatattttagtagaaatcag
tccaagactactccttttaaagactgcaaggttctaaaacagaggccaagatttgtggcc
ctaaagaaacaaccatcttatattggagggcaagaaagtctggagctaagagattatcaa
ttaaatggattaaattggttagctcactcatggtgcaagagcaatagttgcattcttgca
gatgaaatgggattgggtaaaacaatacaaactatctcatttctgaattacttgttccat
gaacatcaattgtatggaccttttttgctggtagtaccactttccactttgacatcatgg
caaagagaaatccagacgtgggctccccagatgaatgctgtagtttatttgggagatatt
acaagcagaaatgtgataagaacacatgaatggatgcatccacagaccaaacggttaaaa
tttaacatcctgctgacaacttacgaaattttgctaaaggataagtcattccttggtggc
ttgaactgggcctttataggagtagatgaagcccatcgactaaaaaatgatgattccctc
ctgtataagacattaatagacttcaagtccaatcatcgccttcttatcactggaacacct
ctgcaaaactccttgaaagagctctggtccctactgcacttcatcatgccagaaaagttt
tcttcttgggaggattttgaagaggaacatgggaaaggaagggaatttggctatgccagt
cttcataaagaacttgagccatttcttctgaggagagttaagaaagatgttgaaaaatct
ctgcctgccaaggttgaacaaattttaagaatggaaatgagtgcattgcaaaagcaatat
tacaagtggattttaactaggaattacaaagccctaagcaaaggttctaagggcagtacc
tcaggctttctgaatattatgatggaactcaagaagtgttgtaatcattgctacctcatt
aaaccaccagatgataatgaattctataataaacaggaggccttacagaatttaatccga
agtagtgggaagctaattttgttagacaagctgctcattcgcttacgagaacgtggcaac
cgagtgcttatattttctcagatggttcggatgctggacatcctagccgaatatttgaaa
taccgtcagtttccctttcaaagactagatgggtcaataaaaggagaactgcggaagcaa
gcactggatcattttaatgcagaaggttctgaggatttctgctttttactgtctaccaga
gctggaggtctgggtataaacttggcatctgctgataccgtagttatatttgattctgac
tggaatcctcagaatgatctgcaagcccaagctagagctcatagaattggacaaaagaag
caggttaacatttatcgtctagtcactaaaggatcagtagaggaagagatcttggaaaga
gccaaaaagaagatggttttagatcatctagtcattcagaggatggacactacaggaaag
acagtgttgcatactggttctgcaccttccagctctgctccttttaataaagaagaactg
tcagctatattaaaatttggtgctgaggaactttttaaggaaccagaaggtgaagaacaa
gagccacaggaaatggacatagatgaaattttgaagagggctgaaacaagggaaaatgaa
actggtccattaagtgtgggagatgaattgctttctcaatttaaggtggctaatttctcc
aatatggatgaagatgacattgaattggagcctgaacagaactcaagaaactgggaagaa
attattccagaagtgcacaggcgcagattagaagaagaggaaaggcaaaaggaattggaa
gaaatttatttacttccacgcatgagaaactgtgcaaaacaggtcagctttaatggaagt
gaaggaagacgttctaggaacagaagatattctggatcagacagtgattctatatcagaa
aggaaacgacccaaaaaacgtggaagaccacggactattccacgggaaaacattaaagga
tttagtgatgcagaaattcgaaggtttataaagagttacaagaaatttgggggccctctt
gaaaggttagatgccatagctagagatgcagagctagtggataaatctgagatagacctc
agacggcttggagaactggtacataatggatgcatcaaagctctaaaagacagttcacct
ggacaggagagagcagggggcagacttggaaaagttaaaggcccaacattcagaatatca
ggagtgcaagtaaatgccaaactagtcatggcccatgaagaagagctatcaccattgcat
aaatccattccttcagatccagaggacaggaagaggtacaccattccttgtcacactaag
gctgctcattttgatatggactggggcaaggaagatgattccaatcttctaattggcatc
tatgaatatggatatggtagctgggaaatgataaaaatggacccagatctcaatttaaca
cacaagattctaccagatgatccagataagaaaccccaagccaagcagttgcagacccgt
gcagactacctcataaaattactaaataaggatcttgcaagaaaggaggcccaaaaactt
tctggggcaggaggttcaaagagaaggaaaatgagagccaagaagagcaagaccataaaa
gccgcaaaaataaaagaggagacaaaaagtgatacatcaccagctccttcagataagtct
gaagaagaggaagatgaggatagcaaggacgaaattgtttctgtgaaacattcaaataaa
aaggtaaaagaaaaagaaaatgaagaaaaccttgattcagatctcactatgaaaaaggag
accgatgagaaaagagaggctaaagaaaacaagagagaacctaaaagagagaaaaaagaa
aaagaggacaagaaagagttgagggaaaaagacataaaagagaagagggaaaacaaacaa
aaagaatatatacagagagaaaaagaagtgaaagaagaaaagacaaatgacatcaagcat
gacagcaaggagaaaagcaagaaagctccttcatcagatattcctgtccatataacagca
agtagtgaaccagttcctatatctgaagaatctgaggagctggatcagaagacatttagt
atatgcaaagaaagaatgaggcctgtcaaagcagcattgaagcagctggataggcctgag
aaaggtctgtcagaaagggagcaactggaacatactagacagtgtcttatcaaaatagga
gatcacataactgagtgtctaaaggaatacacaaatcctgaacaaatcaaacagtggaga
aaaaatctctggatatttgtttccaaatttacagaatttgatgccagaaaattacataaa
ttgtacaaacatgcaattaaaaaacgccaagaaactcagcagcataatgaccagaatgtc
agcagcagtattaacacacattttatcagaaatccagatgtggaacggctgaaagataac
acaaatcatgatgaaagtagcagagacagttactcatctgataggcacttaccacagtac
catgatcatcacaaggacagacttcatggagactcttacaaaaaaggtgattcaaggaaa
aggtcttattccaccttcagcaatgggaaagatcatagggactgggatcattataaaccg
gataacagatactacagtgatggtaaacatagaaaactagatgagcacaggaatagagat
cacaggtcaagcctggaaggaagtttaaaagacagtcgattgcactcagatcatcgacta
cccttagatcaccggtccagttcagactacagtcatcataaatcttcaagagattatagg
tatcattcagactggcaaatggaccacagagcttccagtagtggccccaggtcaccgtat
gattcacgatctccattgggacacagatctccatttgaacattcagcagatcacaaaagt
acaccagaacatatgtggagcagccgaaaaacatag
DBGET
integrated database retrieval system
