Sceloporus undulatus (fence lizard): 121922451
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Entry
121922451 CDS
T07740
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121922451 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sund03041
]
121922451 (DDX5)
03009 Ribosome biogenesis [BR:
sund03009
]
121922451 (DDX5)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121922451 (DDX5)
Spliceosome [BR:
sund03041
]
Complex A
U1 snRNP components
U1 related factors
121922451 (DDX5)
Complex B
121922451 (DDX5)
Ribosome biogenesis [BR:
sund03009
]
Eukaryotic type
Pre-60S particles
Helicases
121922451 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
121922451
NCBI-ProteinID:
XP_042307858
LinkDB
All DBs
Position
2:157531012..157539067
Genome browser
AA seq
600 aa
AA seq
DB search
MPGYSSERDRGFGGPRFGGSRGGSLGGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VARRPMQEIEQYRASKEITVKGHNCPKPVMNFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYGRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSR
GDRRDRYSAGKRGGFGFRERENFERTYGAVGKRDFGAKAQNGGYGAQGFGNGTGFGNNFG
ATGMQGGFRAGTPAYQNGYDQQYGNNMANMHGAMNQQQYAYPATGGTPMIGYPMPANYTQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtattccagtgagagggatcgcgggtttggtggccctcgttttggaggcagc
agagggggatctttaggtggaaagaagtttgggaatcctggagaaaagcttacaaagaag
aaatggaacctagatgagctccccaaatttgaaaagaacttctaccaggaacatcctgat
gttgccaggcgtcctatgcaagagattgaacaatatagagcaagcaaagagatcacagtt
aaaggccataactgtccaaaacctgttatgaacttctatgaagctaattttcctgcaaat
gttatggaagtaatccagcgacagaacttcactgaaccaactgctattcaggcacaaggc
tggccggttgccttgagtggactggatatggttggggtagcacaaactggatcagggaaa
acattgtcatatttattgcctgccatagtgcatataaatcatcagcctttccttgagcga
ggagatgggcctatttgtcttgtgctggcaccaactcgagaattagctcaacaagtacag
caagtagctgcagaatatggcagagcctgccgtttgaagtccacttgtatttatggaggt
gctcccaaagggccacaaatacgtgacctggaaagaggtgtggaaatttgcattgcaacg
cctggtagactcatagactttctggaagctggaaagactaatctccggagatgtacttat
cttgttcttgatgaagctgacagaatgcttgatatgggctttgaacctcagatccggaaa
attgtagaacagatcagaccagataggcagacactcatgtggagtgcaacatggcctaag
gaagttaggcaactagcagaagacttcttaaaagaatatgtacacatcaacattggggcg
ctggagctaagtgcaaatcacaacattctgcagatagtggacgtatgtcatgatgtagag
aaggatgacaagcttatacggttaatggaagaaattatgagtgagaaagaaaacaagacg
attgtgtttgtggagaccaaaagaagatgtgatgaccttactagaaaaatgaggagagat
gggtggccagcaatgggtatccatggtgacaaaagtcaacaagagcgagactgggttcta
aatgaattcaaacatgggaaggctcctatcctgattgctacagatgttgcctccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctctgaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttacgcctaacaatataaagcaagtaagcgacctcatctctgtacttcgtgaagctaat
caggcgatcaacccaaaattgctccagctggttgaagacagaggttcaggtcgttccaga
ggtgaccgacgtgacagatactctgcgggcaaaagaggtggatttggttttagagagagg
gaaaactttgaaagaacctatggtgcagtgggcaagagagactttggtgcaaaagctcag
aatggtggctatggtgctcaaggttttggtaatggaactggctttggaaacaactttgga
gcaactggcatgcagggtggatttagggctggcactccagcttatcagaatggctatgac
cagcagtatggaaataacatggcaaacatgcacggtgcaatgaaccaacagcagtatgca
taccctgcaactggtggtacgccaatgataggttatccaatgccagcaaactatacccaa
taa
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