KEGG   Sceloporus undulatus (fence lizard): 121923162
Entry
121923162         CDS       T07740                                 
Symbol
ITGB5
Name
(RefSeq) integrin beta-5 isoform X1
  KO
K06588  integrin beta 5
Organism
sund  Sceloporus undulatus (fence lizard)
Pathway
sund04145  Phagosome
sund04148  Efferocytosis
sund04510  Focal adhesion
sund04512  ECM-receptor interaction
sund04810  Regulation of actin cytoskeleton
sund04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:sund00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121923162 (ITGB5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121923162 (ITGB5)
   04148 Efferocytosis
    121923162 (ITGB5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121923162 (ITGB5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121923162 (ITGB5)
   04810 Regulation of actin cytoskeleton
    121923162 (ITGB5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sund04131]
    121923162 (ITGB5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sund04515]
    121923162 (ITGB5)
Membrane trafficking [BR:sund04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    121923162 (ITGB5)
Cell adhesion molecules [BR:sund04515]
 Integrins
  Integrin beta subunits
   121923162 (ITGB5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt PSI_integrin EGF_integrin I-EGF_1 EGF_2 EGF_TEN vWA_SIBA-E OppC_N
Other DBs
NCBI-GeneID: 121923162
NCBI-ProteinID: XP_042309255
LinkDB
Position
1:237660414..237772341
AA seq 810 aa
MPRRRRRGLLLVLLPPSSAAAYLCLFSSFLHSVPGLNICTSGSATSCEECLLVHPKCAWC
FKEEFGNKKSITSRCDFIENLIVNGCAGHIESTKSSINTVKNLPLSSKGSSGANSDVTQI
MPQKIFLNLRPGDPASFHVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTTLAEEMG
KLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCTGYKLFPSCVPSFGFRHLLSLTDKVDR
FNEEVQKQKVSRNRDAPEGGLDAILQAAVCEKEIGWRKEASHLLVFTTDDVPHFALDGRL
GGLVQPHDGQCHLNEANEYTASNQLDYPSLALLGEKLAENNIHLIFAVTKNHYLLYKNLT
ALIPGTTIEILYPDSRNIIQLIVKAYNSIRSKVELTVWDNPEDINLGFTATCQDGLSYPG
VRKCGDLQIGDTVSFEISVEARSCPAENTSHTFTIKPDWFRDTLEVTVTYNCTCGCTKQT
EYNSSKCSGNGTHVCGLCECDPGHVGAKCECEEGESGSMYQNMCREAEGKRICNGRGECS
CNHCVCYESEFGKIYGLFCECDDFSCPRYKGILCSGHGECHCGECKCHRGFVGDNCNCST
ETDRCLSNDGQMCSGRGNCICGKCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECVLFNS
GRLADNQTCQKHCRDEIITRVDVLKTDDPHSVLCAYPVKDCVMKFTYSELINGKTNITVL
KEPECSIAPDAMIILLAVVGSIVLLGIILLAIWKLLVTIHDRREFARFQNERSRARYEMA
SNPLYRKPISTHSLDFTFNKLNRTYNGTVD
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgccccggaggaggaggagggggctcctgctggtgctgctgccgccctcctcggccgct
gcctacctctgcctcttctcctcctttctgcacagcgtcccaggtctcaatatttgtaca
agtggcagtgctacctcctgtgaagaatgcttgttggttcatcccaagtgtgcttggtgc
tttaaagaggagtttgggaacaaaaaatccatcacttcaagatgtgacttcattgagaat
ctaattgtcaatggttgtgcggggcatattgagagtacaaaaagcagcattaatacagta
aagaaccttcctttgagcagtaagggctccagtggagctaattcagatgttacccagata
atgcctcaaaagatctttttgaatctgcggcctggtgatccagcctctttccacgtccag
gttcgacaggtggaagattaccctgtagatttatattatttgatggacctttccctctcc
atgaaggatgatttggataccattcggaacctgggaaccaccctggcggaagagatggga
aagctcaccagcaatttccgccttggctttggctctttcgtggacaagaacatttctccc
ttttcttacacagcacccagataccagaacaacccctgcacaggttacaagctatttcca
agctgtgttccatcctttggatttcgacatcttttgtccctcacagataaagtagacagg
ttcaatgaggaagttcagaaacagaaggtttctcgcaacagggacgccccagaaggtggc
cttgatgccattttgcaggctgctgtatgtgagaaggagattggatggcggaaggaggcc
tctcacttgttggtcttcacaacagatgatgtcccacactttgcactggatgggaggctg
ggtggattggtgcagccccatgatgggcagtgtcacctaaatgaagccaatgaatacact
gcatctaatcagctggattatccttcccttgcacttcttggagagaaactagcagagaac
aatatccacctaatttttgcagtgacaaaaaatcactatcttctttacaagaatcttaca
gctcttatccctggaacaacaatagagattttgtatccagactccagaaatattatccag
ctcatagtcaaagcctacaatagcattcgatctaaagtagaattgactgtctgggataat
cctgaggacatcaacctaggtttcacagccacgtgtcaagatggcttgtcctaccctgga
gtcaggaagtgtggagatcttcagataggagatacagtttcctttgagatatcagtagaa
gcccggagttgccctgctgagaatacctctcatacatttactatcaagccagactggttc
cgggacactttagaagtgactgtcacatacaactgcacctgtggatgtaccaaacaaact
gagtacaacagcagcaagtgtagtggaaatggcacacatgtgtgtggcttatgtgaatgt
gatccgggccacgtgggcgccaagtgtgagtgcgaggagggggagagtgggagcatgtac
cagaatatgtgccgtgaggctgaagggaagcgtatctgcaatggccggggggaatgctct
tgcaaccactgtgtctgctatgaaagtgaatttgggaagatctacggcttgttctgtgag
tgtgatgacttctcctgtccaagatacaagggcattctctgctcaggtcatggagaatgc
cactgtggcgaatgcaagtgccaccgtggttttgtcggggacaactgtaactgctcaaca
gaaacagacagatgtctttccaatgatggccaaatgtgcagtggcagaggcaattgcatc
tgtgggaaatgtcagtgcacagaacctggtgcctttggggagacttgtgagaaatgtccc
acctgccccggcgtctgcagcacaaaaagggattgcattgagtgtgtgctgtttaactca
ggaagactggccgacaaccaaacctgtcaaaaacactgcagggatgagatcattacacgg
gtggatgttctcaaaactgatgatccacactcagtgctgtgtgcctacccagtgaaggac
tgtgtaatgaagttcacatattcagaacttatcaatggaaaaaccaatatcactgttctc
aaggaaccagaatgtagtatagcccctgatgccatgataatcttactagctgtggtaggc
agcatcgtgctcctgggcattatcctattggcgatttggaaactgctggtcactattcat
gacaggcgggaatttgccagattccaaaatgagcgttcccgagcaagatatgaaatggct
tcaaatcctctttaccgcaagccgatttctacacacagcttagatttcacattcaacaag
cttaacaggacctacaatggaacagttgactga

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