Sceloporus undulatus (fence lizard): 121923162
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Entry
121923162 CDS
T07740
Symbol
ITGB5
Name
(RefSeq) integrin beta-5 isoform X1
KO
K06588
integrin beta 5
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04145
Phagosome
sund04148
Efferocytosis
sund04510
Focal adhesion
sund04512
ECM-receptor interaction
sund04810
Regulation of actin cytoskeleton
sund04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121923162 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121923162 (ITGB5)
04148 Efferocytosis
121923162 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
121923162 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121923162 (ITGB5)
04810 Regulation of actin cytoskeleton
121923162 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121923162 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sund04515
]
121923162 (ITGB5)
Membrane trafficking [BR:
sund04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
121923162 (ITGB5)
Cell adhesion molecules [BR:
sund04515
]
Integrins
Integrin beta subunits
121923162 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_TEN
vWA_SIBA-E
OppC_N
Motif
Other DBs
NCBI-GeneID:
121923162
NCBI-ProteinID:
XP_042309255
LinkDB
All DBs
Position
1:237660414..237772341
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AA seq
810 aa
AA seq
DB search
MPRRRRRGLLLVLLPPSSAAAYLCLFSSFLHSVPGLNICTSGSATSCEECLLVHPKCAWC
FKEEFGNKKSITSRCDFIENLIVNGCAGHIESTKSSINTVKNLPLSSKGSSGANSDVTQI
MPQKIFLNLRPGDPASFHVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTTLAEEMG
KLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCTGYKLFPSCVPSFGFRHLLSLTDKVDR
FNEEVQKQKVSRNRDAPEGGLDAILQAAVCEKEIGWRKEASHLLVFTTDDVPHFALDGRL
GGLVQPHDGQCHLNEANEYTASNQLDYPSLALLGEKLAENNIHLIFAVTKNHYLLYKNLT
ALIPGTTIEILYPDSRNIIQLIVKAYNSIRSKVELTVWDNPEDINLGFTATCQDGLSYPG
VRKCGDLQIGDTVSFEISVEARSCPAENTSHTFTIKPDWFRDTLEVTVTYNCTCGCTKQT
EYNSSKCSGNGTHVCGLCECDPGHVGAKCECEEGESGSMYQNMCREAEGKRICNGRGECS
CNHCVCYESEFGKIYGLFCECDDFSCPRYKGILCSGHGECHCGECKCHRGFVGDNCNCST
ETDRCLSNDGQMCSGRGNCICGKCQCTEPGAFGETCEKCPTCPGVCSTKRDCIECVLFNS
GRLADNQTCQKHCRDEIITRVDVLKTDDPHSVLCAYPVKDCVMKFTYSELINGKTNITVL
KEPECSIAPDAMIILLAVVGSIVLLGIILLAIWKLLVTIHDRREFARFQNERSRARYEMA
SNPLYRKPISTHSLDFTFNKLNRTYNGTVD
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgccccggaggaggaggagggggctcctgctggtgctgctgccgccctcctcggccgct
gcctacctctgcctcttctcctcctttctgcacagcgtcccaggtctcaatatttgtaca
agtggcagtgctacctcctgtgaagaatgcttgttggttcatcccaagtgtgcttggtgc
tttaaagaggagtttgggaacaaaaaatccatcacttcaagatgtgacttcattgagaat
ctaattgtcaatggttgtgcggggcatattgagagtacaaaaagcagcattaatacagta
aagaaccttcctttgagcagtaagggctccagtggagctaattcagatgttacccagata
atgcctcaaaagatctttttgaatctgcggcctggtgatccagcctctttccacgtccag
gttcgacaggtggaagattaccctgtagatttatattatttgatggacctttccctctcc
atgaaggatgatttggataccattcggaacctgggaaccaccctggcggaagagatggga
aagctcaccagcaatttccgccttggctttggctctttcgtggacaagaacatttctccc
ttttcttacacagcacccagataccagaacaacccctgcacaggttacaagctatttcca
agctgtgttccatcctttggatttcgacatcttttgtccctcacagataaagtagacagg
ttcaatgaggaagttcagaaacagaaggtttctcgcaacagggacgccccagaaggtggc
cttgatgccattttgcaggctgctgtatgtgagaaggagattggatggcggaaggaggcc
tctcacttgttggtcttcacaacagatgatgtcccacactttgcactggatgggaggctg
ggtggattggtgcagccccatgatgggcagtgtcacctaaatgaagccaatgaatacact
gcatctaatcagctggattatccttcccttgcacttcttggagagaaactagcagagaac
aatatccacctaatttttgcagtgacaaaaaatcactatcttctttacaagaatcttaca
gctcttatccctggaacaacaatagagattttgtatccagactccagaaatattatccag
ctcatagtcaaagcctacaatagcattcgatctaaagtagaattgactgtctgggataat
cctgaggacatcaacctaggtttcacagccacgtgtcaagatggcttgtcctaccctgga
gtcaggaagtgtggagatcttcagataggagatacagtttcctttgagatatcagtagaa
gcccggagttgccctgctgagaatacctctcatacatttactatcaagccagactggttc
cgggacactttagaagtgactgtcacatacaactgcacctgtggatgtaccaaacaaact
gagtacaacagcagcaagtgtagtggaaatggcacacatgtgtgtggcttatgtgaatgt
gatccgggccacgtgggcgccaagtgtgagtgcgaggagggggagagtgggagcatgtac
cagaatatgtgccgtgaggctgaagggaagcgtatctgcaatggccggggggaatgctct
tgcaaccactgtgtctgctatgaaagtgaatttgggaagatctacggcttgttctgtgag
tgtgatgacttctcctgtccaagatacaagggcattctctgctcaggtcatggagaatgc
cactgtggcgaatgcaagtgccaccgtggttttgtcggggacaactgtaactgctcaaca
gaaacagacagatgtctttccaatgatggccaaatgtgcagtggcagaggcaattgcatc
tgtgggaaatgtcagtgcacagaacctggtgcctttggggagacttgtgagaaatgtccc
acctgccccggcgtctgcagcacaaaaagggattgcattgagtgtgtgctgtttaactca
ggaagactggccgacaaccaaacctgtcaaaaacactgcagggatgagatcattacacgg
gtggatgttctcaaaactgatgatccacactcagtgctgtgtgcctacccagtgaaggac
tgtgtaatgaagttcacatattcagaacttatcaatggaaaaaccaatatcactgttctc
aaggaaccagaatgtagtatagcccctgatgccatgataatcttactagctgtggtaggc
agcatcgtgctcctgggcattatcctattggcgatttggaaactgctggtcactattcat
gacaggcgggaatttgccagattccaaaatgagcgttcccgagcaagatatgaaatggct
tcaaatcctctttaccgcaagccgatttctacacacagcttagatttcacattcaacaag
cttaacaggacctacaatggaacagttgactga
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integrated database retrieval system