Sceloporus undulatus (fence lizard): 121923680
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Entry
121923680 CDS
T07740
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sund03021
]
121923680 (TAF1C)
Transcription machinery [BR:
sund03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
121923680 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
121923680
NCBI-ProteinID:
XP_042310288
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All DBs
Position
2:complement(334152464..334160169)
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AA seq
780 aa
AA seq
DB search
MWLLVPPRSSSRRTSTWESPRSRCPRFLSWRHQRTVTHQWRDWLFEVPLEQVAEWAHEDL
AERWKCLSFDDTPTGGALVWLPGGGSIGPTPRGCLVYPSGSAMNHLCFQDVVLKLDTRCS
LMPRIRGHPAQFELNGAVRQVAAARVDGQDFLGVRSDYHCVAWRMQPGEAPEALQVVGTD
DPCSSISVSPHLPGQLSICTFAGAVYLWDVEARLQLLHWDKETMFFRDPSTWRWSEFTAH
PQVLTLADRTGLVGIDQRVPSGSRFDLFKMGAEAECQRGERLILSKYLGQGHPYHHLVAT
QFSLCLLDERFPLVPLLRWEHMMERPPVYAQLTPARGPPQSHKLLLGTHHSQELLMLQYT
GLSTPPQLWGPPQKLPSIKDCLPHFPLQKPLQQSILSQRLALPCAGIAAALGQWGQQSQA
LLIFQMSEVGDLFYQLLVHQTEEEETQPGPLDPEDDDPNGGYEMEKRSQDTRPSSSMTPI
PGPADTAPTMVSYRRWLRAFLEAWEELPPEAQSQPPARMTLSQHYLFNRRELRERPANIP
LYKEVRQCLRQAMQNKELVFPWKRGQLGKGPDPLLPPLPQPSQRQDNLRERLEATWGGGW
GSWWQEKLGMTAAQKREVLRERRRRMKKARGPRSISGSFTSFSSGQSELSDSSGWWEDGG
QGGSLGRAAWLRPLGPASEGQGLSVTSLPSSQGTEAGGSEDPLELLSSQTLQARGIPRER
RRTLREYLAIWDQPAKEEVDMDKAEALPLSQASSQGSQSQAAPFASQGLRLARKKPRMGF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttttggtgccaccgcgaagctcctccaggagaacttccacctgggagagtccc
aggtcccgttgcccccgcttcctgtcctggcgccaccagcgcacggtgacccaccagtgg
cgagactggctatttgaggtgcccctggagcaggtggctgagtgggcccacgaggacctg
gctgagcgatggaagtgcctctcctttgacgacacccccacggggggcgctctggtttgg
ctgcccggcggggggagcatcggacccacccccagaggatgcctggtgtatccatccggg
tcggccatgaaccacctctgcttccaagatgtggttttgaagctggacacccgctgctcc
ctgatgcctcggatccggggccaccctgcgcagtttgagctcaacggtgcggtccggcaa
gtggcagctgcccgcgtggatggccaagacttcctaggagtgcgctcggattatcactgc
gtggcatggaggatgcagcctggggaagcaccggaagcactccaggtcgtcggcaccgac
gacccctgctcctccatctctgtcagcccacacctgccaggccaactctccatttgcacc
tttgccggagctgtctacctgtgggacgtggaggccagacttcaactgctgcactgggac
aaggagaccatgtttttccgcgacccgtcaacttggcgttggagcgagtttaccgcccac
ccacaggtgctcactttggctgaccggaccggcctggtgggcattgaccagagggtgccc
tctggctcccgtttcgatctcttcaagatgggggctgaagcggagtgccagcgcggcgag
cggctcatcctctccaagtacctgggccagggccatccgtaccatcacctggtggccact
cagttctctctctgcttgctggatgagcgttttccgctggtgcctctcctccgctgggaa
cacatgatggagcggccccccgtctatgcgcagctgacacccgccaggggtcctccacag
agccacaagctgcttttgggcacccatcactcacaggagctgctgatgctccagtacaca
ggtcttagcaccccaccccagttgtgggggcccccgcagaagctgccatctatcaaggac
tgcctgccacacttccccctgcagaaacccctccagcaaagcatcctgagccagcgtctc
gctctcccttgcgctggcattgcggctgccctgggtcagtggggccaacaaagccaggcc
ctgctcattttccagatgtctgaggtgggcgacctcttctaccagctactggtccaccag
acggaggaagaggagacacaaccgggacccttggatcctgaagatgatgaccccaacggc
ggctatgagatggagaaacgtagccaggacacccgcccttcttcctccatgacgccgatc
cctggcccggccgacaccgctcccaccatggtcagttaccgccgctggctgagggctttc
ctggaggcctgggaagagctgcccccggaggcacagagccagccgccagcccgaatgacc
ctcagccagcactatttgttcaaccggcgtgagctgcgtgagcggccggcgaacatcccg
ctctacaaggaggtccgccagtgcctgcgccaagccatgcagaacaaggagttggtgttc
ccctggaagaggggtcagctgggcaaggggcccgaccctctcctgccgccgctgccacag
ccctcccaacgccaggacaatcttcgcgagcggctggaggccacgtggggtggtggctgg
ggcagctggtggcaggagaagctgggcatgacggcagcgcagaagcgggaggtgctgcgg
gagcgccggaggcggatgaagaaggccaggggaccccgcagcatctctggcagcttcacc
tctttttccagcggccagtcggagctgagtgactcttctggctggtgggaggatggtggt
caagggggcagcctggggagagcggcttggctcaggcctcttggtcccgccagcgagggg
cagggactctccgtaacatcccttccttcttctcaagggacggaagccggtgggtcagag
gaccccttggagctgctctcctcacagactctacaggcgcgcggcatcccccgggagcgc
cgccggacgctgcgagagtacctggccatctgggaccagccggccaaagaggaggtggat
atggacaaggcagaggcactgcctttgagccaggcgtccagccagggcagccagagccag
gccgcccctttcgcttcccaggggttgcgtctggcacggaagaaaccgcgcatgggcttc
tga
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