Sceloporus undulatus (fence lizard): 121923795
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Entry
121923795 CDS
T07740
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121923795 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
sund04091
]
121923795 (FREM1)
Lectins [BR:
sund04091
]
C-Type lectins
Lecticans
121923795 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
121923795
NCBI-ProteinID:
XP_042310516
LinkDB
All DBs
Position
2:234807588..234907075
Genome browser
AA seq
2177 aa
AA seq
DB search
MLKLPLQGQRSHLPFNKVFSSAKMMENSRLLLLFVLHLRGICSSFVNVNRGMKVMKGQSV
FLSQEDLQFSIPKEKDACKVEVVMNEPIMQRVGKLTPQVFDCHFLPNEVKYTHNGCPILD
EDLVLLRLYRFTETETYTEIFTLRVKLVEPDCNIIKMSSIALEVSEFHGLSNVINKNVIN
LDYNRNINLECTISLNSVETFLPSHGQLVTGEVKEEEPRGDQPHSFSPSSGLKTIQNIKV
SCQDFLLMGLRYQHLDPPSPSIDYIPIRLDLTDRRSKTVYKSEHAWIPVQIRGAISNQAP
QAAFMAMFILEADQFILSPLSTAILDAEDGETPKSLLVFNITKPPQEGYITHLQDHTKPV
LSFTWNSLNDMLIAYQPLNRSHTERRNYEVEFEVHDLYFEKSSPITLYISVRTTDTNAPR
VSWNTGLDLLEGQSRPITWKHFQIVDNDDISGVRLVTVDGLQHGQLTVRGEKGFLFTVSD
LKAGVVRYHHDDSDSTKDYIVFRIFDNRHSSRHRFPINILPKDDSPPFLINNVEIEVHEG
QVILIQGSMLQASDMDSSDDYILFNVTKLPQAGEIMKKPGPDLTGYPVTKFLQKDLFNGI
IYYRHLGGEIFEDSIEVILCDSHEPPNLSEIQVIRVHIIPVDDQLPKETSGVKRHLTVKE
TEIAYLTKKHLNFIDTEAEDRELIYTVISPPFFSSFHHYTDAGKLFMVDSIPRLIKDPAT
PSLRSFTQHAINHMKVAYMPPLQDIGPEPQYIQIRFSVSNQHGGTLYGICFNITILPVDN
QAPEVFTNNLKVQEGGFSTITERNILISDVDTKLENIYIHLLRPPLYGTVELSGIPTNEG
DQMTCEDLRMSRVRYHHNGSEVPQDHILLAATDGVNSFEFILYIKVIPINDEPPIMHNNL
IPIMQCPEGQTVSITSAHLYATDADSEDMLLVFILARHPKYGVVKKDGIVVDRFSQAAVI
SGTVAYEHTSGEIGLDPLFDILTFVVSDDETGQDINACCYDGSPFSTEPLHKSFPVYDIN
ITIFPVDNQAPSISTGAIFIVDEGSKATITINHLYATDPDTEDDDLQFVLVSPPQFGYIE
NILPSPGFEKSNMGISIASFHLKNVKAQHINYVQSRHKRIEPTTDQFMLYANDGKHRSMT
TPFYVLINPTNDEAPEFIARNITVKEGQIKELDPSVINAVDMDVPQDALVFTVLQSPQHG
LLINGKYSNNIVGHKHRHQHHELPVEGFSMEFLKNGMQLMYMHDDSDSLADGFSIQLSDG
KHKVSKTISVEVIPVNDEKPVLSKKGKIEVNMGEAQIISGAVLSAKDKDTPREQIYYLFE
RVPENGHLQLKVGRDWVTLENGMNCTQENIDMNIVRYIHTGTIGSKEQDSFMFCLWDGNN
RSPLVIFPITIKDVGKGNIAVFMKPLTVLKGDRGLLMTDVLLAVDGTEKPEELLYVITSP
PQYGQIEYVSYPGVAITSFSQMDVAGQAVCYVHNSKAASPRDMFRFIISNGLRTKHGEFE
IILETVDQALPTVTKNKGLRLLEGGMAFLSPDVLQLSDPDTAPQNLSFLLAQLPQYGQLY
KRDSGLWQQSFSQQDVDTLNVVYRHGGGDSQIDKFTFVATDGVNQGFIVNSKVQVEPLAF
IIQVESPAKPAPKIVHLRCASDVELLKNGNYGIYITVRSLKATDCDTDDGQIIFRILRGP
QYGYLQNITTGGFIQEQFSQKDLNSKTILYVIDPYEERNSDSLEIQVTDPEGNSADPERL
ELKWSKIEMQQDTYEVCENVGMLPLKISRSGHTADSAFVAVKVNEMTALSGKDFTVPSSQ
LIQFDPGMSTKMWNIAITCDGLEEDEEVFEVALISPVNAVLGTRTKAVVKILDSKGGQCS
SFHSSSQNSRDLWMKGTLLPGSSSSSRHATAHLEGIPLPPSKETVGQRRDELPQFDSVSL
ARSRLRAIGNGKRVHPSSIFRNGNDTFLQYHGMAVLKVEDDKPLRNKNEMATMSGINQRK
VKKSVVSLKKTQVPQADSSILVQSFSFPNRCTPDLKGLLHFEENTRKMYQCDGISWAIWN
NTNKGSILKTCPHGWSHHDGNCYVLITDPKSIWTVAARNCRRQYHGSLVSVTTTTQMQWL
WDLSGRKPFWIGLSDHRNPGQLAWNDGKQITYTNWRNGPPRLSKKGKNCFLAQQQGKWQR
KDCRKSKGYSYICSRKL
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcttcccttgcaaggacaaagaagccacctccccttcaacaaggttttctcc
tctgctaaaatgatggagaacagcaggctccttttgctctttgtacttcatctgagaggc
atctgctcctcctttgtcaatgtcaaccgtgggatgaaagtgatgaagggtcagtctgtc
ttcctgtcacaagaggacttgcagttttccatccccaaggagaaggatgcttgcaaagta
gaagttgtgatgaacgagccaataatgcagagagttgggaagctaaccccacaggtattt
gattgccattttcttcccaacgaagtcaagtacactcacaatgggtgtccaattcttgat
gaagacttagtcctgttgaggctatacagatttactgaaactgaaacatacacagaaata
ttcacccttcgtgtaaagttagtggaaccagattgtaatattatcaagatgagctctatt
gctctggaggtttctgagtttcacggcctctctaacgtaattaacaagaatgtaattaat
ttggactacaacaggaatattaacttggagtgtactataagcctgaactctgtagaaact
ttcctaccatcccatggccagcttgttactggagaggtcaaggaagaagaacctcgtgga
gatcaacctcacagtttttccccatcatctggcttgaagaccattcagaacatcaaagtg
agctgccaagattttctcctgatgggtcttagataccagcatttggatcctccttcaccc
agcattgattacattcccatcagactggatcttacggatcgcagaagcaagactgtgtac
aagtctgagcatgcttggattcctgttcagatcagaggagctatatctaaccaggcccca
caagccgctttcatggctatgttcattctggaagcagaccagttcatcttgagcccattg
tcaacagctatactggatgcggaagatggtgaaacacccaaatctcttcttgtcttcaac
attaccaagccaccccaagaagggtacatcactcacctgcaagatcacacaaagcctgtc
ttgtccttcacgtggaacagcctcaatgatatgcttatagcataccagcctttaaacagg
agtcataccgagaggagaaattatgaggtggaatttgaagttcatgatttgtactttgag
aagagttcaccaatcactctctatatatctgtcagaacaacagatacaaatgctcctcgg
gtttcatggaatacaggtcttgatctcttggaaggacagtcacgaccaataacatggaag
cattttcagattgtagacaatgatgatatcagtggtgttcggttagtcactgttgatggt
ttacagcatggacagctcactgtaagaggagaaaagggattcctcttcacagtctcagac
cttaaggctggtgttgtacgttaccatcatgatgacagtgattccacgaaggactatatt
gtctttaggatctttgataatcgccacagtagccgccacaggtttcctatcaacattctg
cctaaagacgacagtcctccattcctgattaataatgtggagatagaggttcatgaagga
caagtgattctgatccaagggtcaatgctccaagcctctgacatggactccagtgatgac
tacatactctttaatgtcaccaaattgccacaggcaggagaaatcatgaagaagcctgga
ccagatcttactggttatccagtcactaaattccttcagaaagatcttttcaatggaata
atttactaccgtcacttaggaggagaaatatttgaagattcaattgaggttattctctgt
gatagccatgagcctcctaatctttcagaaattcaggtaataagagtgcacataattcct
gtggatgatcagcttcccaaagaaacttccggagtaaaacgccatctgactgtcaaggaa
acagagattgcctatttgacaaagaaacacctcaacttcatagacacagaagcagaagat
agagagctcatctatacagtcatttctcctccattcttttcttcatttcatcactacaca
gatgctggaaaattgtttatggtagacagcattccaaggctgatcaaggatcctgctact
ccatcactgagatcatttactcagcatgccataaaccacatgaaagtggcatatatgcca
cctttacaagatattggtcctgagcctcagtacatccagatcagattctcagtcagcaat
cagcacggtggaactctgtatggcatctgttttaacattactattcttcctgtggacaac
caagctccagaggtgtttacaaacaacttgaaagtacaagaaggagggttctccaccatt
acagagaggaacattttgatttctgacgtggacaccaaactggaaaacatttacatccac
ctcctaaggccacctctgtatgggactgttgaattaagcggaattcccacaaatgaagga
gaccaaatgacctgtgaagacttacgcatgtccagagtcaggtatcatcacaatggatca
gaggttcctcaagatcatatcctccttgcagctacagatggtgttaattcctttgagttc
atcctatacattaaggtgattcctataaatgatgagcctccaattatgcataacaacctc
attcccatcatgcagtgtccagagggtcagacagtgtctataacttcagcgcacctttat
gctactgatgcagacagtgaagacatgctgctggtgttcatacttgctcgacatcctaaa
tatggggttgtgaagaaggatggaattgtggttgaccgtttttctcaagcggctgtcatt
tcgggaacagtagcatatgaacataccagtggagagattggcttggatcctttatttgat
atccttacctttgttgtctcggatgatgaaacgggtcaagacataaacgcctgttgttat
gatggatctcccttttctactgaacctctccataaatcttttcctgtgtatgatattaac
atcacaatatttccagtggacaaccaggcaccatccatatccactggtgccatatttatt
gtggatgagggctccaaagctacaattacaattaaccacttgtatgccacagatcctgat
actgaagatgacgacttgcagtttgttttagtatctcctcctcagtttgggtatatagaa
aatatattaccatcccccggctttgagaaaagcaacatgggaataagcatagcctctttc
cacctgaaaaatgtgaaggcccagcatatcaactatgttcagagcaggcacaaaaggatt
gaaccaaccacagaccaattcatgctttatgccaatgatggaaaacatcgttcaatgaca
acaccattttatgtcttaatcaacccaaccaatgatgaagccccagaattcatagcaagg
aatattacagtgaaggagggacaaattaaagaactggatccatctgtaataaatgctgtt
gatatggatgtacctcaagatgctctggtgtttactgtccttcagtcgccccaacatggg
ctcctaattaatgggaagtacagcaacaatattgttggccacaaacatagacaccagcat
catgaacttcctgtggagggattctctatggagtttttaaaaaatggaatgcagctgatg
tatatgcatgatgactctgatagcctagctgatggtttttctatccagctatcagatgga
aaacataaagtatcaaaaaccatttcagtagaggtcattccagttaatgatgagaaacca
gtgctgagcaagaagggtaaaatagaggtgaacatgggggaagcccaaattatttctggt
gctgttctgtcagcgaaagataaagacacccccagggaacaaatttattatttatttgaa
agagtcccagaaaatggacatcttcagctcaaggtaggtcgtgactgggtgacacttgag
aacgggatgaattgcacccaggagaacatagacatgaatattgtgagatacatacacact
ggtacaattggctcaaaggaacaagatagtttcatgttttgtctctgggatggaaacaac
cgatcccctctggtcatttttcctattaccattaaggatgttggaaaaggaaacattgca
gttttcatgaaacccctcactgtgttgaagggtgacagaggcctattgatgactgatgtc
ctccttgcagttgatggcactgagaagccagaggagcttctctatgtgatcacttcccct
ccgcagtatgggcagattgagtatgtcagctatcctggagttgccattacaagtttcagc
cagatggatgtggcaggtcaggctgtctgttacgtccacaacagcaaggcagcttctccc
agagatatgttccgattcatcatcagcaatggactaagaactaaacatggagagtttgag
atcatattggagacagtggaccaagccttacccaccgtgaccaagaacaaggggttaaga
ttattggaaggtggcatggcattcctttctccagatgttctgcagctttcagatccagac
acagctccacaaaacctttcctttctcctagctcagctcccacaatatggtcagctctac
aaaagagattctggactgtggcagcagagcttcagccaacaagatgtggacactctgaat
gttgtttataggcatggaggcggggattctcagattgacaaatttacctttgttgcgaca
gatggagtgaatcaaggcttcattgtaaatagcaaggttcaagtagaacccttggcattc
atcattcaggtggagagcccagcaaaaccagcgccaaaaattgtccaccttcgttgtgct
tcagatgtggaactgctgaaaaatggcaactatggtatttatattactgtccggtcactg
aaagccacagattgtgacacagatgatggccaaatcatatttaggattttgcgaggacct
cagtatggctacttacaaaatataacaacaggtggatttattcaagaacaattcagccag
aaggatttaaatagcaagaccatactgtatgttattgacccttatgaggaaaggaattca
gatagcctggagattcaagttactgatcctgaaggaaactctgctgaccctgagagactg
gaactgaaatggtccaaaattgaaatgcaacaggatacttatgaggtctgtgaaaatgtg
gggatgctgcctttgaaaatcagccgatcagggcacactgctgattcagcttttgtggca
gttaaggtgaatgaaatgactgctttgtcaggaaaggattttacagtcccttcttcccaa
cttattcagtttgatccaggaatgtcaaccaagatgtggaatatagcaattacctgtgat
ggattagaggaagatgaggaggtctttgaagtggctctgatctcccctgtgaatgctgtt
cttggcaccaggacaaaagctgtagtgaaaattttggactcaaaaggaggtcagtgcagt
tcattccattcctccagccaaaacagtcgcgacttatggatgaaaggaacattgcttcca
ggctcctcttcatcttccaggcatgccactgctcacttggaaggaatcccgctgccccca
tctaaagagacagtaggacagagaagggatgagctaccgcagttcgactcagtcagtctt
gcaaggagcaggctcagggccattggaaatggcaaaagagtccatccttcttccatcttc
agaaatggcaatgatacatttcttcaataccatgggatggctgtgctaaaagtggaggat
gacaagcctttgcgtaacaagaatgagatggcaacaatgtcaggaattaatcaaagaaaa
gtgaagaaaagtgtggtttctctcaagaaaacacaagttccacaagcagattccagcatt
ctggttcagagtttttcctttccaaatagatgtacaccagatttgaaaggtctcttgcat
tttgaagaaaacaccaggaagatgtatcagtgtgatggtatttcttgggccatatggaat
aatacaaacaagggttctatcttaaaaacctgtcctcatggatggagtcaccatgatgga
aactgctatgttctgatcactgatccaaaatccatatggactgtagctgcccgaaactgc
aggagacagtaccatggcagtttagtcagcgtgacaactacaacacagatgcaatggctg
tgggacctcagtggaaggaagcctttttggataggcttgagtgaccacagaaatccaggt
caattggcatggaatgatggaaaacagattacttacacaaactggagaaatggcccacct
cgtctttcaaaaaaaggcaagaactgctttttagcacaacaacagggaaaatggcaaaga
aaggactgcaggaagagcaaaggctatagctatatatgctctaggaaactgtaa
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integrated database retrieval system
