KEGG   Sceloporus undulatus (fence lizard): 121923905
Entry
121923905         CDS       T07740                                 
Symbol
POLQ
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase theta
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
sund  Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:sund00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sund03400]
    121923905 (POLQ)
Enzymes [BR:sund01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     121923905 (POLQ)
DNA repair and recombination proteins [BR:sund03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    121923905 (POLQ)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 Helicase_dom4_arc DEXQc_Suv3
Other DBs
NCBI-GeneID: 121923905
NCBI-ProteinID: XP_042310771
LinkDB
Position
2:complement(198327621..198383227)
AA seq 2345 aa
MASSEAPPWAPSSSSSCPSLARGAGQRSPVLSPPPGLTHPRHWRLSSPAASGQLPYVGLP
DDLADKLLLANWGLPKAVLEKYHSLGVTQMFQWQAECLMVGQVLEGKNLVYSAPTSAGKT
LVAELLILKRVLETRKKALFILPFISVAKEKKYYLQAIFREAGVQVEAYVGSISPAVRFS
ALDVAVCTIERANGLINRLIEEKALDSLGIVVVDELHMLGDSQRGYLLELLLTKISFLAE
RMNKQTSMGTPLSNGIQIVGMSATIPNLGLLASWLNAELYHTDFRPVPLMEQVKIGSKIY
DDSIKALREIQPLIHIKNDEDHVVTLCYETVQDGHSVLVFCPSKNWCEKLADIIAREFYN
LQQNYLQKISTLAPVTLDMPRIDLLMSQLKNSPSGLDCVLQRTIKWGVAFHHAGLTFDER
DIIEVAFRQGVLRVLVATSTLSSGVNLPARRVIIRTPMFGNRLLDVLTYKQMAGRAGRKG
VDTIGESILVCKAAEKSKGITLLQGQLKPVRSCLFSHEGEGITSSMLRAILEIIVNGVAN
SPDDIKHYASCTLLGATLKDFQDTEREQEGTCLGSIDACVKWLLDNEFIFISVSDVGKEI
YSATQLGRATLFSSFSPTAALEIFADLQRAMKSFVLENDLHSLYLVTPLYDDWAKIDWYR
FFCLWEKLPSSMRRVAELVGIEESFLACSVKGKVIAKTEKQHRQMAIHKRFFTSLALLDL
ISEVPLKDVATKYSCNRGQLQSLQQSAATYAGMITIFCNRLGWHNMEQLLSQFQSRLTFG
IQRELCDLIRISLLNAQCARALYDAGFNTVADVANGKVTEVENAIRNAAPFRSARKAVDE
DEEAAQERLSTRCIWMPGLKGLTESEAAQLVVEEAKTLLKQDLAVWGVQWKPNTSLLSDA
SDISSIIEGALEEEIHGLNHKPVLRTSHRITSSGNCVNSQPESCVKQQKKRLLDVSPKDQ
EKTLGDGNKTKTGNADIYSSASKRLNLDRDSKNINDASVKQKLDDTEAKTSTEQTTKPEL
NSTSKRAHIGTKFKRKVEVNLKQSRDQSSIAKSNGMSQAANISEAHNHADNAVKYFEHIE
NCHCPEFEESFQLDTQTDKILQQQMGGEIPNEQRIRERELVAKPTGTDFIYTRSASISEP
AGKDFICTSSASTSGTYISDVKDNLVCRKAHINTKSIAGSTNELHRIESNKSQIKPAEKT
PETLGCLEKNSFYVLDSQLDSFLQQYQTPDLVKESASAVLKKDSLDVNEQNLNNSDSLLF
DESFSDINVPQAVHTGEAVAMEAFPSQQVIPSPFKCTSEYDFLGEQDMLSDEDVLNATIN
QRRSAGCNKENSVVLDNDVFHVVERLDTMAVPPFLTNISKLKNSNGIVNFRTDTIENGAG
GNLLKGGVQNYSNLAGKCDTLFDLSPGMKELLDGWPSPSGGEPEMGKKNPTKVMLSMNND
LGTISAPCHGKCELSFCKAFESNHIPTEIDDEAKTCSSLVINRNGASGFLTVENRRPPSP
VNLNKPALACLEQSFVIQGRHLNPMKKGPCLQLIQNATLESHLQAEILQQKTEVGEHIEI
LPEEDNSIVAEDFSLQLSQDKVLPPSCSADNFTIIDVANNKTLFQTFIKEWKTKKRFAIS
VACERTSGSQSHRSGIGAKFKAGSTLKKVSTKIXGFPMKPHEDTLXVGLAVCWGGKDAXY
ISLQEKLKEEIEISASLAPPXMDQNLTVAERLEHLQSCLQIPRKNFHCVYEFIQHYKTLL
KAVGXLFGRMFEDPKVACWLLDPGSNERSLHSMVASFLPEELFLLDKIGTGXGQSDLGLN
ATANPSGRYRAAVDLSVLFYLSPLIADIFHKVEMPNQYCLALLELNGIGFSTAECETQKH
VMEAKLSEIENRIYQLAGHSFSLTCPDDIAEVLFLEQKLPSDVEPKMQRGKKTLGYTGRA
AANGNRVRLSKQFSTTKDVLEKLKVLHPLPGLILEWRKITNAITKVVFPLQREKLLNPVL
GMERIYPISQIYSATGRISFREPNIQNVPKDFEIEMPSLVEESPPSQKQHNMFSVPKNRS
RKHSVLPCEPKSLTETVSSGKRIPFAVSMRHAFVPFPGGLILAADYSQLELRILAHLCCD
RRLLQALNDGADVFRSIAAEWKMIDPEAVGDDLRQQAKQICYGMIYGIGAKSLGEQMGVE
ETDASHYIESFKSRYPGIQKFLRETVKKCSQDGFVQTIMGRRRYLPSIRESNPYKKAQAE
RQAVNTVVQGSAADIVKTATVNIQKQLEALPAAVKSFGHLDSSFEKKWSGKSVRAEKRQI
TYPRHGGFFILQLHDELLYEVAEDSMIQVAQIVKHEMENAVKLSVKLSVKVKAGSSWGDL
QELYL
NT seq 7038 nt   +upstreamnt  +downstreamnt
atggcgtcgtctgaggcgcctccgtgggccccttcttcttcttcctcctgcccttccctt
gctcggggagcgggccagaggagccccgtgttgagcccccctccggggctgacccacccc
cgccactggcgcctcagcagccccgccgcctcaggacaactcccatatgtgggtcttcca
gatgacttagctgacaaacttcttttagcaaactggggtcttcccaaagccgtcctggag
aaataccatagcttgggagtaactcaaatgttccagtggcaagcggagtgtctgatggtt
ggacaagtcctagaagggaaaaacttggtctactcagctcctacaagtgctgggaaaacg
ctagttgctgaattacttatactgaaaagagttctagaaactcgcaaaaaagctttattc
attctaccttttatctctgtggcaaaagaaaaaaaatattaccttcaggctatcttccga
gaagcaggtgtgcaagtagaagcttatgtaggaagtatctctcctgctgtccgcttttct
gccctggatgttgctgtctgtaccattgagagagccaatggtctgatcaacagactcata
gaagagaaagcactggactcgctaggaatagtggttgtggatgagttgcacatgttggga
gattctcaaagaggctatctcctggagctcctgctgacaaaaattagctttttggctgaa
agaatgaacaaacaaacaagcatgggcacccctctctctaatgggatacaaattgttggt
atgagtgctaccattcctaatctgggtctgctggcctcctggttaaatgcagagctatat
cacacagacttccgtccagtgccacttatggaacaggtgaaaattggcagcaagatttat
gatgattcaattaaagctttgagagaaattcagcctctgattcatataaagaatgatgag
gatcacgtggtgactctgtgttatgagacagttcaagatggccattctgttcttgttttc
tgcccatcaaagaactggtgtgagaaactagcagacatcattgccagggagttttataat
ctccagcagaattatcttcagaagatttctacgcttgctccagttacactagacatgccg
aggatagatctgttgatgagtcagctaaagaattctccttctggcttggactgtgtgctt
cagcgaacaataaaatggggcgttgcttttcaccatgcaggtcttacatttgatgaacga
gatataattgaagtagcttttcgtcaaggagtgcttcgagtattagtagcaacttctact
ctttcttctggagtgaatctgccagcccgtcgtgtaattatccgaactcctatgtttggt
aacagattgttggatgtcttgacatacaaacagatggctgggagagctggaaggaaagga
gtagataccataggtgaaagcattctggtttgcaaggctgctgagaaatcaaaaggcatt
actcttcttcagggtcaactcaagccagtgcgcagctgtttgttcagccatgaaggagag
gggattacttccagtatgttacgggcaatccttgagatcatagtaaatggtgtagctaac
tctccagatgacatcaagcattatgcttcctgtacacttcttggagctactttgaaagat
ttccaggatactgagagagagcaagagggaacttgtcttgggtctatcgatgcttgtgtg
aagtggctacttgacaatgaattcatctttatttcagtctctgatgtcggcaaagaaatt
tattctgcaacacagcttggccgtgctactctgttctcctcattttcacccacagcagca
ctagaaatttttgctgatcttcagagagcgatgaagagctttgtcctagagaatgatctg
cacagtctctatttggttactcctctttatgatgattgggctaaaatagattggtatcga
ttcttttgcttatgggagaagttgccttcctcaatgaggagagtagcagagttggttggg
attgaagaaagctttttagcctgctctgtgaaaggcaaagttattgctaaaactgagaaa
cagcacaggcaaatggccatccacaaaaggttttttacaagtctggctctcttggattta
ataagtgaggttcctttaaaggatgttgctacaaaatatagttgtaatcgtggacagctt
caatctttacaacagtctgctgctacttatgcagggatgattactattttctgtaaccgc
ctggggtggcacaatatggaacaactgctctctcagtttcagagtcgcctgacttttgga
attcagagagagctctgtgatcttatccgtatatctctgctaaatgcacagtgtgccaga
gcactttatgatgctggtttcaacacagtagctgatgtggctaatgggaaagtcactgag
gtggaaaatgccatcaggaatgcagcaccgttcagaagtgctcgtaaggcagtggatgaa
gatgaagaagctgctcaggaacggcttagtacccgctgtatctggatgcctggactgaag
ggcttaaccgagagtgaagcagctcaactggttgtggaggaagccaaaactctcttgaag
caggatttggctgtttggggagtgcagtggaagcccaatacctctcttttatcagatgca
tctgacatatcatccataatagaaggtgcccttgaagaagaaatccacggattgaatcac
aaaccagtattaagaacaagccacagaataacttcatctggcaactgtgttaattctcaa
cctgaatcatgtgtaaaacaacaaaaaaagagacttttagatgttagtcccaaagatcaa
gagaagactctgggagatgggaataaaacaaaaacaggaaatgctgatatttattctagt
gcaagtaaacgacttaatctggacagagatagcaaaaatataaatgatgcctctgtgaaa
caaaagttggatgacacagaagccaagacaagcactgaacagacgacaaagcctgaactg
aactctacttctaaaagggctcacatagggactaaatttaagagaaaagttgaagttaac
ttgaaacaaagtagagatcaaagtagcattgcaaaatcaaatgggatgtcacaagctgca
aacataagtgaagcacataatcatgctgataatgctgtgaagtattttgaacatattgaa
aactgtcactgcccagaatttgaagaaagtttccagctggatacgcaaacagataagata
ttgcaacagcagatgggtggtgaaattcctaatgaacaaaggatcagagagagagagttg
gtagcaaaaccaacagggacagattttatttatacaaggtctgccagcatttcagaacca
gcagggaaggattttatttgtacaagttctgctagtacttcaggaacttatatttcagat
gttaaggacaacctagtgtgcagaaaagcacatataaatacaaaaagtatagcaggaagc
acaaatgaattgcataggatagagtctaacaaatcccaaataaagcctgctgaaaaaacc
ccagaaacattaggatgccttgaaaaaaacagtttttatgtcctggactcccagttagat
agttttttacaacagtatcaaactccagatctagtaaaagaaagtgcatcggccgttcta
aagaaggattctttggatgttaatgaacaaaatctgaataacagtgatagtttgctgttt
gatgaaagctttagtgacattaatgtccctcaggctgttcacactggtgaagctgttgcc
atggaggcttttccatcacagcaggttattccttctcctttcaaatgtacttcagaatat
gatttcttaggtgaacaggacatgttgtcagatgaggatgtattaaatgccactataaac
cagagaaggtcagcaggatgtaacaaggaaaattctgtagtgttggataatgatgttttc
cacgttgtagaaaggttagacacaatggctgtgcctcctttccttacaaatattagcaaa
ctgaaaaattcaaatggcatagttaatttcagaactgatacaattgaaaatggtgcgggg
ggaaatctattaaaaggtggtgtacaaaattatagtaacctagcaggcaagtgcgatact
ctatttgatttaagcccaggaatgaaagaacttttagatggatggccaagtccatcagga
ggtgaaccagaaatgggtaaaaaaaatcctacaaaagtaatgttgtccatgaataatgat
ttaggtacaatctctgccccttgccacggtaaatgtgaattatccttttgcaaggctttt
gagagtaaccacatacctacagagatagatgatgaggctaagacttgttcgtctttggta
atcaacagaaatggagcatctggctttttgacagttgagaacaggaggcctccttctcca
gtgaacctcaataagcctgctttagcatgtttggagcagtcctttgtgatacaaggaaga
catttgaatcctatgaagaaaggtccatgtcttcagcttatacagaatgctacacttgag
tcacacctgcaggcagaaatcttgcagcaaaaaactgaagttggagaacacattgagatt
ttacctgaggaggataactcaattgtagctgaagatttttcactgcagttatctcaagat
aaagttctgccaccgtcatgcagtgctgacaacttcactataattgatgtggcaaataat
aagactctcttccaaactttcattaaagaatggaaaacaaagaaaagatttgctatctcg
gtagcttgtgaaagaaccagtgggtcccaatcccacagatcaggtattggtgccaagttt
aaagcaggaagcactttaaagaaagtgtccacaaagatanngggatttcccatgaaaccc
catgaagacacattgnaagttggattagctgtatgttggggtggaaaggacgctnactat
atctcattgcaggaaaaactcaaagaagagatagaaattagtgccagcttggcaccacct
nccatggatcagaatttgactgtagcagagaggttagagcaccttcagtcgtgtctgcaa
atcccaagaaaaaactttcactgcgtgtatgaattcattcagcactacaagacgctcctg
aaagccgtggganntctctttggcaggatgtttgaagacccaaaggtggcatgctggttg
ctggatcctggatctaatgagcgctcccttcatagcatggttgccagtttccttcctgag
gaattgttcttgttggacaaaattggaacaggcnnagggcaatcagacctagggctcaat
gccactgcaaatccttctgggcggtacagagcagctgtagatctgtctgttttgttttac
ttatcaccccttattgcagatatttttcataaagtagagatgccaaatcaatattgtttg
gccttgctggaactcaatggtataggttttagtactgcggagtgtgagacccagaaacat
gttatggaagcgaaactgagtgagattgaaaatcgaatataccagctggcgggccacagt
ttctctttgacctgtcctgatgatattgctgaggtcttatttttggagcaaaagctccca
tcagatgtagaaccaaaaatgcaaagaggcaagaaaactttaggttatactggaagagca
gcagcaaatggaaacagggtcagattgagcaagcagttcagtacaaccaaggatgttcta
gagaaactgaaggtgttgcatccattaccaggcctgattttagaatggagaaagatcact
aatgcaataaccaaggtggtatttccactgcagagagagaagcttttgaaccctgtactt
ggaatggagaggatctatcctatttctcagatttacagtgctacaggtcgcataagcttc
agagaaccaaatatacagaatgtgcctaaagattttgaaattgaaatgccaagcctggtt
gaagaaagcccaccttcccaaaaacaacataatatgttcagtgttccaaaaaacagaagt
agaaagcattctgtactaccatgtgaacctaaaagtctgactgaaacagtatccagtgga
aaaagaattccattcgctgttagcatgagacatgcctttgtaccatttccaggtggtttg
atcttggcagcagattactcccaacttgaattgcggatccttgcccatttgtgttgtgat
cggcggcttctacaggcattgaatgatggtgccgatgtattcagaagcattgcagctgag
tggaagatgattgaccctgaagcagttggagatgatttaaggcaacaagccaagcagatt
tgctatggaatgatctatggaataggagctaaatccttgggggaacagatgggtgttgag
gaaacagatgcttcccactacattgaatctttcaaatcaagatacccaggtattcagaaa
ttcctaagagagacagtaaagaaatgcagccaagatggatttgtgcagacaatcatggga
cggcgtagatacctcccatcaattagagaatcaaacccatacaagaaggcacaggcagag
aggcaggctgtgaacactgtggtccagggatctgcagcagatattgttaaaacagccaca
gtgaatatccagaaacagctagaagctttacctgcagcagtaaagtcttttggacacttg
gacagctccttcgagaaaaaatggtcaggaaaatcagtcagggcagaaaaaaggcagata
acctatccaagacatggagggttcttcatactccagctgcatgatgaacttctttatgag
gttgcggaagacagcatgattcaggtagcacagattgttaagcacgaaatggaaaatgct
gtgaaactttcagtgaagctctcagtaaaagtgaaagccgggtcaagctggggagacttg
caagagctgtacttgtga

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