Sceloporus undulatus (fence lizard): 121924220
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Entry
121924220 CDS
T07740
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sund03400
]
121924220 (APEX2)
Enzymes [BR:
sund01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
121924220 (APEX2)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
121924220 (APEX2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
121924220
NCBI-ProteinID:
XP_042311408
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Position
2:188918096..188927040
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AA seq
533 aa
AA seq
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MRLLSWNVNGLRAWAGAGALRPLLESLGADVICLQETKVTRDLLEEPLAIVEGYNSYFSF
SRTRSGYSGVATFCKASATPEAAEEGLSGLWTKHEGAVGCYGDLGEFTTEELQALDSEGR
AVITRHRICTSEQQETTLTVINVYCPRADPEKPERGDFKLRFYHLLQTRAEALLRAGGHV
VIMGDINTAHKSIDHCDPGDMESFHEHPGRRWLDGFLWEPGKDSLHGGLFVDTFRFLHPT
QEDAYTCWCNVTGSRHLNYGTRIDYILADCALVLSELKEAQLRPEVLGSDHCPVQAVLKS
VCLGAPRCPPLCARFLPEFAGTQQKLNRFLVKVERNGLPEKGQKRDLVEPSAVMEVSKKS
RTGLSRKGQGDLRSFFKVGNSQGGNTDSAGYQSEMNMLQRAAEDFGKEPPAKTAERTADE
HGMEDVATVTQVPLGVLGEESSIGVTNEGTRNCEKDVVPSKPNQSAALWKSLLPGPARPP
CCKAHGEPCVLRTVKKPGPNCGRRFYVCARPLGKSSDPRARCDFFLWASRGNS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgctgagctggaacgtgaacgggctccgggcgtgggccggggccggggcgctg
aggccgctgctggagtccttgggggcggatgtcatctgcctgcaggagaccaaggtgaca
cgagacctgcttgaggagccattggctatagtggagggctacaactcttattttagcttc
agccgaacacgcagtggctactcaggtgttgccaccttttgtaaagccagtgctactcca
gaggcggctgaggagggcctgtcggggctgtggaccaagcatgagggagctgtgggttgt
tatggagacctgggggaattcaccacagaggagctccaggcactggacagcgaaggtcgg
gcggtcatcacccgccatcggatttgcacttcagaacagcaggagaccaccctgacagtc
atcaacgtatactgtccccgtgctgaccctgaaaagccagaacgaggagacttcaagctg
cgcttctaccacctccttcagaccagggcggaggctcttcttagagctgggggccatgtt
gtcatcatgggagacatcaatactgcacacaaatccattgatcactgtgacccaggagat
atggaatcctttcatgagcatcctggtcgccgctggttagacggtttcctgtgggagcca
gggaaagattccctacatggaggactctttgttgataccttccgctttctccaccctact
caggaggatgcctatacctgctggtgcaacgtgacagggtcacggcacctcaattacggg
acccgcattgactacatcttggccgattgtgcccttgtgttgtcagagctgaaagaagcc
cagctcaggccagaagtgttaggctctgaccactgtcctgtacaggctgtgttgaaaagt
gtctgtctgggggctccccgctgcccacccctttgtgcccgtttcctgcctgagtttgct
ggcacccagcagaaactcaaccgcttcctggtgaaagtggaacggaatggcctgccggaa
aaggggcagaagcgggacttggtggaaccgagtgcagtgatggaagtttccaaaaagagt
cggactggcctgtcacggaaggggcaaggtgatttgcgcagcttcttcaaagttgggaac
agccagggtggcaacactgacagtgctgggtaccagtcagaaatgaacatgttgcagagg
gcagcagaagattttgggaaagaacctcctgctaagactgctgaaaggacagctgatgaa
catggcatggaggacgttgccactgtaacccaggtgcctcttggggttttgggagaggag
tcctctataggagtgaccaatgagggaaccaggaattgtgagaaagatgtagttccctcc
aagccaaatcaatctgctgccttatggaaatccctgctgcctggtcctgctcgtccacca
tgctgcaaagcccatggggagccctgcgtcctccggacagtgaagaaaccagggcctaac
tgtgggcggcgcttttatgtctgtgcccgtcccctcgggaagtcctctgatccccgtgcc
cgctgtgacttctttctctgggccagtcggggcaattcttaa
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