Sceloporus undulatus (fence lizard): 121924306
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Entry
121924306 CDS
T07740
Symbol
HCFC1
Name
(RefSeq) host cell factor 1
KO
K14966
host cell factor 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03083
Polycomb repressive complex
sund04980
Cobalamin transport and metabolism
sund05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121924306 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
121924306 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121924306 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sund01009
]
121924306 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sund03036
]
121924306 (HCFC1)
03029 Mitochondrial biogenesis [BR:
sund03029
]
121924306 (HCFC1)
Protein phosphatases and associated proteins [BR:
sund01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121924306 (HCFC1)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
121924306 (HCFC1)
HMT complexes
COMPASS/SET1 complex
121924306 (HCFC1)
MLL-HCF complex
121924306 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
121924306 (HCFC1)
Mitochondrial biogenesis [BR:
sund03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121924306 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
121924306
NCBI-ProteinID:
XP_042311584
LinkDB
All DBs
Position
2:190510273..190538126
Genome browser
AA seq
2203 aa
AA seq
DB search
MAATTTASPLVPIGGSPVTGASAGLLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVF
GGGNEGIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSN
DLYELQASRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPR
YLNDLYILELRPGSGVVAWDIPITYGVLPPPRESHTAVVYTEKDSKKSKLVIYGGMSGCR
LGDLWTLDIDSLTWNKPTLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEK
EWKCTNTLACLNLDSMSWEPILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWN
NQVCCKDLWYLETEKPPSPSRVQLVRANTNSLEVSWGSVSTADTYLLQLQKYDIPAATSP
AANPVPSVPVNPPKSPAPAAAAPVPAVQPLAQMGITLLPQTTAVAAAATAAAAAPAPPTT
TTIQVLPTVPSSPMPVPAPAAAAAATPRPQAVPAVLKVTGPQATTGTPLVTVRSAGQPGK
GPVTVTSLPAGVRMVVPTQNTQGTVIGSSPQMSGMAALAAAAAATQKIPPSSAPTMLSMP
AGTTIVKTVAVSPGTTTLPTTVKVASSPVMVSNPATRMLKTAAAQVGTSVSSSTTNTPTR
PIITVHKSGTVTVAQQAQVMTTVVGGVTKTITLVKSPISVPGGSALISNLGKVMSVVQTK
PVQTSAVTGQASTGPVTQIIQTKGPLPAGTILKLVTSADGKPTTIITSSQAGGTGTKPTI
LGISSVSPNTTKPGTTTIIKTIPMSAIITQSGATGVTSSPGIKSPITIITTKVMTSGTGT
PAKIITAVPKLATSHGQQGVTQVVLKGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPTVT
TLVVKGTTGVTTLGTVTGTVSTSLAGTGGHNTNASLATPITTLGTIATLSSQVINPAAIT
VSAAQTTLTAAGGLSTPTITMQPVSQPTQVTLITTPSGVEAQPVHDLPVSILASPTTEQP
TATVTIAESGQGDQQPGTVTLVCSNPPCETHDTGTTNTATTTVVGTLGGQAQLQFVCDGQ
EGGLQPNGRVVRVCSNPPCETHETGTTNTATNVLSAGQKVCTNPPCETHETGTTNTATTS
KTEKAPTDPPCQTFQTSATGTTMTVKPIVGTSQLVCSNPPCETHETGTTNTATTATSNMG
RGQPDSEQTDPANPPCQTKQTNTTSTTMSTKADVATEQPCPVRMVSFLTAVGTPTVASGT
SAAQTSERLPAPKSLQCESHHTHTTNTATTARSLMGRGQPDDEWVGSANPPCQTQQTNST
STTMSAKADVPTKQSCTLQMVSPDLAAKPASLSTPCKTLKMNTKDSSPQVCSNPPCETHE
TGTTNTPSVAASNMGITQQVCSNPPCETHETGTTNTATSSMAAGQQVCSNPPCETHETGT
TNTATTTTSNMGAGQGESSGQGESTQQTPSTPPCETQQTSSTGTTMTPNIGGDGTQVSSS
TFPQGGGSELGKGTEVETAGPDGSPPRSPTPKVCSNPPCETHETGTTHTATTVTSSMGSN
QDQPPATNGQQGEPETTVSESTAAASSPSAVTTTVPSTQTRAVTTVTQSTPPPGPSVPNI
SSLADAPAEEAAPPAETPVATSTDALPGPPEPLHPSVEMQSPAAVAPEPQEQVQAALAST
PPAEGPPAEAAQQPELPAPVEEPPPAPATPAQEPVAMVVLPQATPTAPPPPSEVEQLALP
QELMAESQAGATTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMG
PGEAMDTSETAAAQAELSHLGSEASEGQATAIPIVLTQQELAALVQQQQQLQEAQAAAVA
AAAAAAAQQHQPQHSLPSHLPTEALAPADSLNDPASESNGLNELASAVTSTVGLLPPTPT
ESLAPSNTFVAPQPVVVAASPAKLQAAAALAEVANGIEPAPVKPEPPAQPPKVVVKKENQ
WFDVGVVKATNMMVTHYYLPHDAASATDDDSGTIPDYSQLKKQELQPGTAYKFRVAGINA
CGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKITEYSVYLAIQS
AQAGEPKSAAPAQLAFMRVYCGPSPSCLVQSASLSNAHIDYTTKPAIIFRIAARNEKGYG
PATQVRWLQESNKDGSMVKPANKRPLSSPDLKTAPKKPKADGQ
NT seq
6612 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaccaccaccgcctcgcctctggtccctatcgggggctcccctgtaacaggt
gcctccgcagggctcctcctgcagcccagatggaagagggtcgttggctggtcagggccc
gtccctcgcccccgccatgggcaccgcgctgtggccatcaaggagctgatcgtggtcttc
ggagggggaaacgagggcatcgtcgacgagctccatgtctataacacagctacgaaccag
tggttcatcccagctgtgcggggagacatcccacctggctgtgctgcctatggttttgtt
tgtgatgggacacgcctgctggtctttggtgggatggtggagtatggcaagtacagcaat
gacctctacgaactacaagccagccgttgggaatggaagagactgaaggccaaaactccc
aagaatggccccccaccctgcccacgccttggccatagcttctcattggtgggcaacaag
tgctacctatttgggggccttgccaacgacagtgaagatcccaagaataacatccccaga
tatctgaatgatctctatatcttggagctgcgtcccggttctggtgtggtcgcttgggac
atccctatcacatacggtgtactacccccaccaagggagtcccacactgctgtggtatac
acagaaaaggacagcaaaaaatccaaactggtcatatatggtggcatgagtggttgtcgt
cttggtgacctctggacacttgatattgattctctgacatggaacaagcccaccttgagt
ggagtggctcccctcccccgcagcttgcactcagccacaaccattgggaacaagatgtac
gtatttggaggctgggtgcctctagtcatggatgatgtcaaagtggccacacatgaaaaa
gaatggaaatgcacaaatactttggcctgcctcaacctagattccatgtcttgggagccc
attctgatggacaccctggaagataatattccccgggcacgggctggacactgtgctgta
gccatcaatactcgtttgtatatctggagtggtcgtgatggctaccgcaaggcttggaat
aaccaggtttgctgcaaggatctttggtaccttgagacagagaaacctccatcgccttca
cgggtgcagctggtccgtgccaacaccaactccctggaagtgagctggggttctgtctca
actgctgacacttacttgctacagctgcagaagtacgatatcccagctgccacctcgcca
gctgccaatcctgtaccctcagtgcctgtcaatccccccaagagccctgctccagctgca
gctgctcctgtccctgctgtgcagccactggcacaaatgggcatcaccctcctgccccag
accacagctgttgctgccgccgccaccgctgctgccgctgctcctgccccacctaccaca
accaccatccaggtgctgcctactgtgcctagcagccccatgccagtgcctgctcctgct
gccgccgccgctgcaacccctcgtccacaagctgtcccagctgtgctgaaggttacgggc
ccacaggctaccactgggactccactggtgacagtacgttcagctgggcagcctgggaag
ggcccagtgacagtgacttcattgccagccggagtgcgcatggtagtgcccacacagaac
actcaaggaacggtgattggcagcagtccccagatgagtggcatggctgctttggcagct
gctgctgctgccactcaaaaaattccaccatcctcggcccctactatgctcagtatgcct
gctggtactaccatagttaagactgttgctgtttccccgggcaccaccacgctacccacc
acagttaaggtagcttcttctcctgtcatggtgagcaacccagcaacccggatgctgaaa
actgctgctgcccaggttggcacctcagtctcttcatctaccaccaatacacctacccgt
cccatcattaccgtgcacaagtctgggactgtcactgtagcacagcaagcccaggtgatg
accactgtggtgggtggagtgacaaagaccatcacattggtgaagagtcccatatcagtg
cctggtggcagtgcattgatttccaacttgggtaaggtgatgtctgttgtccagacaaaa
ccagtccagacatcagctgtgacaggccaggcatcaactggccctgtgacccaaataatc
cagaccaaagggcccctgcctgctggtactattctaaaactggtgacctcagcagatgga
aagcccaccacaatcatcaccagctcccaggcaggtggtacaggtaccaaacccaccatc
ctgggtatcagcagtgtctctcccaacacaaccaaacctggtaccaccaccatcatcaag
accatccccatgtcggctattattacccaatcaggtgccacaggtgttactagtagccct
ggaatcaaatctcctatcaccatcatcaccacaaaagtgatgacctcaggcactggcaca
cctgccaagatcatcacagcagtacctaaattggccacaagtcatgggcaacagggtgtg
acacaggtggtgcttaaaggagcgccaggtcaacctggcactatcctgcgaactgtccct
atgggtggagtgcgcctcgtcacacctgtcactgtgtctgctgtcaaacctactgttacc
actttagtggtcaaaggaactacaggtgtcacaactttggggactgtaacaggcacagtc
tcaactagcctggctgggactggggggcacaataccaatgcttcactggctacacccatt
accaccttaggcacaattgccacactttctagccaggtcatcaacccagctgccatcact
gtctctgcagctcaaaccactttgacagcagcaggaggcctgagcacacccaccatcacc
atgcagcctgtctcccagcccactcaagtcacactgatcacaacaccgagtggtgtagag
gcccagccagtacatgacttgcctgtctctattttggcctcacccaccacagagcagccc
acagccaccgttactattgcagaatcagggcagggagaccaacagccaggcactgtcact
ttggtgtgttccaatccaccctgcgagacacatgacaccggcacaaccaacacagccaca
acaactgttgtgggcactttaggtggacaagcccagttgcagtttgtctgtgatgggcaa
gaaggtgggcttcagccaaatgggagagtggtgagggtatgctcaaacccaccttgcgag
actcacgagacagggaccaccaacacagccaccaatgtactcagtgctgggcagaaggtg
tgcaccaacccaccctgtgaaacgcatgagacgggcactaccaatacagccaccacctct
aaaacagagaaggcaccaacagacccaccatgccaaacgttccagactagtgctactggc
accaccatgaccgtgaagcccattgtgggtaccagtcagctagtgtgctccaatccaccc
tgtgaaactcatgaaacgggcaccaccaacacagctaccaccgccacttccaacatgggt
cggggtcaacccgacagtgaacagacagatccagcaaaccctccgtgccaaacaaagcag
actaataccaccagcaccacaatgtcaacaaaagcagatgttgcaacagagcagccctgc
ccagttcgcatggtgagttttttgacagctgttggtacacccactgttgcctctgggacc
tccgcagcacaaaccagtgaaagactaccagcccccaaaagtttgcagtgtgaatcccat
catacccacaccaccaacactgccactacagctcggtctctcatgggccgagggcaacct
gatgatgagtgggtaggatctgccaaccctccgtgccaaacgcagcagacgaattccacc
agcaccaccatgtctgcgaaagctgatgtgcctacaaaacagtcatgcacattgcagatg
gtttcaccagatttggctgcaaagccagcctcgctgagcacaccttgtaagaccctcaaa
atgaacaccaaggactcaagcccacaggtgtgctctaatccgccctgcgaaactcatgaa
acgggcaccactaacacaccatctgtcgctgcatcaaacatgggtattacccagcaggtt
tgctccaacccgccttgtgagactcatgaaacaggcaccaccaacacagccacttccagt
atggctgcagggcagcaagtgtgctccaatccaccatgtgagacccatgaaacaggcacc
accaacacggctaccacaaccacttcaaacatgggtgctgggcaaggtgagagttctgga
cagggtgaaagtacccagcaaacccccagtactcctccctgtgagacgcagcagacaagc
tccactggcacaactatgacacccaacattggaggtgatggcacccaggtttccagctca
acctttccacagggtggaggctctgaattgggaaaaggaactgaggtagagactgcaggc
cctgatggatcaccgccccggagtccaacacccaaagtgtgttccaaccctccttgtgag
acccatgagactggaacaacgcatacagccactactgtcacatcctccatggggtccaac
caagaccagccacctgctaccaatggccagcagggggagccagagacaactgtgagcgag
agcacagccgccgccagcagccctagcgctgtaactaccaccgttccctccacacagacc
cgggctgtcaccactgtgacacagtccacacctccgccaggaccctcagtgccgaatatc
tcttcattggctgatgctcctgcagaagaggcggctcctcctgctgaaaccccagtagct
accagcacagatgccctcccagggccccctgagcccttgcacccttctgtagagatgcag
tcaccagcagcggtagcacctgagcctcaggagcaagtccaggctgcccttgctagcact
ccgccagcagaaggcccacctgctgaagctgcccagcagccagaactcccagctcctgtg
gaggaaccgccaccagcaccagcaacacctgctcaggagcctgtggctatggttgtgctg
ccccaagccacccctactgctcctccgccaccctcagaggtagagcagttggctcttccc
caagagctgatggctgagagtcaggcaggtgccaccacactcatggtgacagggttgaca
ccagaggagctggcagtcactgcagctgcagaggctgctgcccaagctgctgccactgaa
gaggcacaagccctggcgatacaggcagttttgcaagctgcccagcaagctgtcatgggt
cctggagaagctatggatacgtctgagacagcagcggcacaggcagagctaagtcactta
ggctcggaggcttcagagggccaggccactgccatcccaattgtcctaacacagcaagaa
ctggctgcccttgtacagcagcaacaacaactccaggaggctcaggcagcagcagtagca
gctgctgccgcagctgccgctcaacaacatcagcctcagcactcactgccttcccatttg
cccacagaagccctggcccctgctgatagtctcaatgaccctgccagtgaaagcaacggt
ctgaatgagctggcaagtgccgtcaccagcacagttgggctattgccccctacacccaca
gaaagccttgctccatcaaatacttttgtagccccacaaccggtggtggtggcggccagc
ccagcaaaactgcaggctgcagctgctttggcagaggttgctaatggcattgaaccagct
ccagtgaaacctgagcctcctgcacagcctccaaaggtggttgtgaagaaagaaaatcag
tggtttgatgtgggtgttgtcaaggcgaccaacatgatggtgacacattactacctgcct
catgatgctgcatctgctacagatgatgactcgggcactatacctgattattctcaactc
aagaagcaggaactgcagccgggtacagcttacaagttcagagtggcaggaatcaatgcc
tgtggccggggccctttcagcgaaatctcagcattcaagacctgtctgcctggctttcct
ggagcaccctgtgccattaaaatcagtaagagtcctgatggagcacacctgacttgggag
cctccttctgttacctctggaaagatcacagagtactcagtatacctggccatccagagt
gctcaggcaggagagccgaagagtgcagccccagctcaactggccttcatgagggtttac
tgtgggcccagcccctcatgcctagtgcagtcagctagtctctccaatgcccacatagac
tacaccaccaagcctgccatcattttccgcattgctgcccgcaatgagaagggttatgga
ccggccacacaagtccgatggcttcaagaatccaataaggatggttccatggtaaaacca
gccaacaagcgaccgctttcctctcccgacctgaaaactgctccaaagaagcccaaagca
gatgggcagtga
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integrated database retrieval system
