Sceloporus undulatus (fence lizard): 121924837
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Entry
121924837 CDS
T07740
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121924837 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sund01009
]
121924837 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sund04515
]
121924837 (PCDH20)
Protein phosphatases and associated proteins [BR:
sund01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121924837 (PCDH20)
Cell adhesion molecules [BR:
sund04515
]
Cadherins
Protocadherins
121924837 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
121924837
NCBI-ProteinID:
XP_042312264
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All DBs
Position
3:134761701..134768738
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AA seq
957 aa
AA seq
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MRRRGKEAGGLPAKEEEKQQQQQQQRHPPPAMGQPPGPGTTIAKQRNLPNLLIFLLFLGP
FNCFASYSRATELFYSIHEGLPAGFLIGNLAQDLHLQGAADKEGARAVEEGWQQPEQWGK
VPLSFNLASQGLGSQYVNLNNRTGELYTSGQEIDREALCTEDNVGSSVVASSSSPALSSE
SCLLLLDVLVLPQEYFRLVKVKIAIHDVNDNAPCFPMPQIHLFVPENSPVNTRLAIEHPA
VDPDMGTNGVQIYQLQDDFGVFTLDVEENESGERTPYLIVMGALDREARDEYITLITAED
GGVPPLVGTATLTIGISDINDNCPQFNETQINVTVFGNSSIGLHIASVHAVDVDEGINAE
ITYSYSQKVAQSSRTLFHLDESTGIIKLAKRINGDTPRFHRLSVLANGPGCIPAVITVLV
SIIKVMMRPPEVIPRFIANEAEGVVYLRELEPVNTPIAFFTIKDPDEKYKVDCYLDGDGP
FRLSPYKPYHNEYLLETTKPLDYEAQQLYEISVVAWNTEGFHVNKILKVQVLDDNDNSPV
FSQPLIELTIEENNAPHAFLTKLYATDADSGERGRVSYFLGPEAPSYFSLDKVTGVLTVS
TQLDREEREKYRYTVKAIDSGVPPRESIATVTILVLDKNDNSPRFINKDFSFFVPENFPG
FGEIGVISVTDADIGQNGWVALSVVNGSDIFVIDTGKGVLRAKVSLDREQQSSYTIWVEA
VDGGDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDNDT
GMNAVIAYSIIGRRGPRPDSFKIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLH
STVMVNLFVNDTVSNESYIESLLRKEPDINIEEKEPQISIEPTHKRVEAASCMPTLVALS
IISLGSITLVTGMGIHICLRKGRKYHTGDENLEVQIPLNARIDLHMLEKKPVEISNI
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgccgagggaaggaggctggggggctccccgccaaagaggaggagaagcagcag
cagcagcagcagcagaggcacccaccgccggcgatggggcaaccacccggccctgggacc
accatcgccaagcagaggaacctcccgaacctactcattttcctgctcttccttggacct
ttcaactgctttgcaagctacagtcgtgccactgaacttttctacagcatccatgaaggg
ctacctgccgggttcctcatcgggaatctagcccaggatttacacttacagggggcagcg
gacaaagaaggagctagagctgtggaggaagggtggcagcagcctgagcaatgggggaaa
gtccctctgtctttcaatctggcatctcagggcttgggaagccaatatgtcaacctgaac
aaccggacaggcgaactgtacacctctggccaagaaattgaccgggaagcactatgcaca
gaggacaatgtgggctctagtgtggttgcctcatcctcttcaccagcgctctcttctgag
tcgtgtttgttgttgctggatgttctggtcttgcctcaggagtatttccgccttgtcaag
gtgaagattgccatccatgatgttaatgacaatgcaccatgttttcccatgccacagata
cacctctttgtgcctgagaattcacctgtcaacacgcgtttggctatagaacacccagct
gtagatccagacatgggtactaatggggtccagatataccaactgcaagatgactttggg
gtttttacgttggatgtggaggagaatgaaagtggggaaagaacgccttatctgattgtc
atgggtgccttggacagggaggccagagatgaatatattacactcataacagcagaggat
ggaggagttccaccactggttggcactgccaccctcaccattggcatcagtgatatcaat
gacaactgtccccagttcaatgagacccagataaatgttactgtctttgggaactctagc
attgggttgcacatagcatctgtccatgctgtagatgtggatgaaggcatcaatgcagag
atcacctattcttatagccagaaggtggcacagtcatcccgcacattgttccaccttgac
gaaagtacaggcattatcaagcttgccaagaggattaatggggacactccccgtttccat
cggttgagtgtcttggcaaatggtcctggttgtatcccagctgttatcaccgtgctagta
tctatcattaaagtcatgatgagacctcctgaagtgatccctcgcttcatagctaatgaa
gcagaaggggtagtttacctaagggagttagaacccgttaacacaccgattgcgtttttt
accattaaggatccagatgaaaaatacaaagtggattgctatctggatggtgatggtcca
ttcaggttgtcgccatacaaaccctaccacaatgagtacttactggaaactacaaagccg
ttggattatgaggctcaacagctctatgaaatatcagtggttgcgtggaatactgaagga
ttccatgtaaacaaaatacttaaagtacaagttctggatgataatgacaactcgcctgtt
ttctctcaaccactaatagaattaacaatagaggaaaataatgctccccatgcttttttg
accaagttgtatgcaactgatgctgacagtggggaaaggggccgagtgtcttacttccta
gggcctgaagcaccatcgtatttttctttagataaagtcacaggagtcctaacagtttcc
acccaactggacagagaggaaagagaaaaataccgctatactgttaaagcaatagattca
ggagtgccaccccgggaatcaatagctacagttacaattttagtcttggataagaatgac
aacagtccacggtttatcaacaaggattttagcttttttgtgccagagaatttcccaggc
tttggtgaaattggagttataagtgtcaccgatgcagatatagggcaaaatggatgggtt
gcactttccgttgtaaacggaagtgatatctttgtgatagacactggcaaaggagtgtta
agagctaaggtctctctagacagggaacagcagagctcatacaccatatgggttgaagcg
gtggatggcggtgaccctgccttgtcctcaactgcaaaaataaccattcttttgctggac
atcaatgacaatccaccacttgtcttgtttcctcagtctaacatgtcttatctcttagtc
cttccttctacgctgcctggctcaccaatcacagaggtctatgcagtggataatgacaca
ggcatgaatgcagttatagcatacagcatcataggaagaagaggtccccgtccagactct
tttaagattgaccccaagacaggcaacatcactctggaagagtcactcatgcagaatgac
tatggcctttatcggcttcttgttaaagttagtgatcatggttacccagaacctctccat
tccacagtcatggtgaacctctttgtcaatgacactgtgagcaacgaaagctacattgaa
agcctgctgaggaaagagcctgacattaatattgaggaaaaagaaccgcaaatctccata
gaacccacacacaaaagagtggaagcggcatcttgcatgcctaccttagtggccctgtca
ataataagtttgggttcaataacactggtaactggaatgggtattcatatctgcctaagg
aaagggagaaaataccacacaggagatgaaaatttggaagtacagatcccattgaatgca
agaattgatctgcacatgctggagaagaaaccagtagaaatttccaacatctga
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