KEGG   Sceloporus undulatus (fence lizard): 121924875
Entry
121924875         CDS       T07740                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
sund  Sceloporus undulatus (fence lizard)
Pathway
sund03410  Base excision repair
sund04140  Autophagy - animal
sund04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:sund00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121924875 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121924875 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    121924875 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sund03036]
    121924875 (HMGB1)
   03400 DNA repair and recombination proteins [BR:sund03400]
    121924875 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sund04147]
    121924875 (HMGB1)
Chromosome and associated proteins [BR:sund03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    121924875 (HMGB1)
DNA repair and recombination proteins [BR:sund03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     121924875 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     121924875 (HMGB1)
Exosome [BR:sund04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   121924875 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 NOA36 DH_2
Other DBs
NCBI-GeneID: 121924875
NCBI-ProteinID: XP_042312314
LinkDB
Position
3:complement(33226500..33239514)
AA seq 213 aa
MGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMARADKVRYEREMKTYIPPKGESKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTPADDKQPFEKKAAKLKEKYEKDIAAYRAKGKPEVAKKLAPKPEK
SKKKEEEDEDEEEDEEDEEDEEEEDEEEEEDDE
NT seq 642 nt   +upstreamnt  +downstreamnt
atgggcaaaggtgatcctaaaaagccaagaggtaaaatgtcctcatatgcctactttgtg
caaacttgtcgggaagaacacaagaagaaacatccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgctcagaaaggtggaagactatgtctgctaaggagaaaggaaagttt
gaagatatggcacgagctgacaaggttcgttatgaaagagaaatgaaaacttacatacca
ccaaaaggcgagtcaaaaaagaagttcaaggacccaaatgcaccaaagagacctccttca
gcatttttcttgttctgctctgagtatcgtccaaaaatcaaaggagaacatcctggtctt
tctatcggggatgttgcaaagaaacttggagagatgtggaataatactcctgcagatgat
aagcagccctttgaaaaaaaggcagctaaactgaaagagaagtatgaaaaggatattgct
gcatacagggctaaagggaagcctgaagtagccaaaaaattagctccaaagcctgagaaa
agcaagaaaaaggaggaagaggatgaggatgaagaggaggatgaagaggacgaagaagat
gaggaggaagaagatgaggaggaagaagaagatgatgaataa

DBGET integrated database retrieval system