Sceloporus undulatus (fence lizard): 121924977
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Entry
121924977 CDS
T07740
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
121924977 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sund04040
]
121924977 (KCNMA1)
Ion channels [BR:
sund04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121924977 (KCNMA1)
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Ortholog
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GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
121924977
NCBI-ProteinID:
XP_042312532
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All DBs
Position
3:complement(152324663..152937573)
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AA seq
1340 aa
AA seq
DB search
MANGSGGGGGGGGGGGGGGGGSGSSYYSGGGGGGGGGGGGGGSSSSSGGGSSSSGNIRMS
SPLSGSGSSLNADSSSAPARPSNALIIPITMEVPCDSGQRMWWAFLASSMVTFFGGLFII
LLWRTLKYLWTVCCHCGAKEKEAQKINVSAEPQADGDLKPTDEKEETVAAEVGWMTSVKD
WAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVF
FLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSE
ILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVY
LLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAV
SGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVE
FFQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQ
MLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAPGLSTMLANLFSMRSFIKI
EEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELVFAKLKLLMIAIEYKSEKRESRS
RKRILINPGNHVKIQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRLIY
SKMSIYKRIKLACCFDCGRSERDCTCMSGSVHSNMDTLERAFPLSSVSVNDCSTSLRAFE
DEQPTTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNEQVDNMDCNVKKYDSTGMFHW
CPAKEIDKVILTRSEAAMTVLSGHVVVCIFGDMTSALIGLRNFVMPLRASNFHYHELKHI
VFVGSLEYLRREWETMHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTS
LQDKECILASLNIKSMQFDDSIGVLQANSQGFSPPGMDRSSPDNSPVHGLLRQPSITTGI
DIPIITELAKPGKLLPLVSISQEKNSGTHILMITELVNDSNVQFLDQDDDDDPDTELYLT
QPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELESLIAEENALRGGYSTP
QTLANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDFNQSTPS
QCTKRFVIANPPYEFELVPTDWIFCLMQYDHNAGQSRASLSHSSHSSYTSSKKSSSVHSI
PATANRQNRTKTRDSREKQNATRMNRMGQAEKKWFTDEPENAYPRNIQIKPMSTHMANQI
NQYKSTSSLIPPIREVEDEC
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagtggaggcggcggaggaggcggcggaggaggaggaggcggcggcgga
ggcagcggtagtagctactactccggcggaggtggtggtggaggaggaggaggaggtgga
ggaggaagcagcagcagcagcggcggcgggagcagcagcagcggcaacattaggatgagc
agccccctaagcggcagcgggagcagcctcaacgccgactcgtcctcggccccggcccgg
ccctccaacgccctgatcatccccatcaccatggaagtgccctgcgacagcgggcagcgc
atgtggtgggccttcctggcctcctccatggtcaccttcttcggggggctcttcatcatc
ctcctctggaggaccctcaagtacctgtggaccgtctgctgccactgcggggccaaggag
aaggaggcccagaagataaatgtcagtgcagaaccccaggcggatggggacttgaaaccc
acagatgagaaagaggaaaccgtagcagcagaagtgggctggatgacctctgttaaagac
tgggcaggggtgatgatttcagcccaaactttaactggcagagtccttgttgttttagtc
ttcgctcttagtattggtgctcttgtaatatacttcatagattcgtcaaacccaatagaa
tcttgccagaatttctacaaagatttcacgttacagatagacatggctttcaacgtgttc
ttcctgctctactttggtttgcgtttcatagcagccaacgacaagctgtggttctggctg
gaagtaaactcagtggtagatttcttcacagtccctccagtgtttgtttcagtgtattta
aacagaagttggctgggtttaagatttttacgagctcttagactgatacagttctcagaa
attttgcagtttctgaatatccttaaaacaagtaattccatcaagttggtgaatctgtgc
tcaatatttattagcacatggctgacagcagctggatttatacatttggtggagaactca
ggggatccatgggaaaacttccaaaataaccaagcgcttacatattgggaatgtgtttat
ttactaatggttactatgtccactgttggttatggagatgtttatgcaaaaacaaccctt
ggtcgccttttcatggtcttcttcatcctcgggggattggccatgtttgccagctacgtc
cctgaaatcatagagttaataggaaaccgcaagaaatatggtggttcctatagtgcggtt
agtggaagaaagcacattgttgtctgtggccacataacattggaaagtgtgtccaacttc
ctgaaggacttcctgcacaaggacagggatgatgtgaacgtagaaatcgtctttctgcat
aatatctcccctaaccttgagttggaagctctttttaaacgacacttcactcaggtggaa
ttttttcagggttcagttctcaatccgcatgacttggctagagtaaagatagagtcagca
gacgcgtgcctaatccttgccaacaaatactgcgctgacccagatgctgaggatgcctcc
aatattatgagagtaatttccataaagaattatcatccaaaaataagaataattacccag
atgctgcagtatcacaacaaggcccatctgctgaatatcccaagctggaattggaaggaa
ggggatgatgcaatctgccttgcagagctcaagctgggcttcatcgcccagagctgcctg
gcaccaggcctatcgacaatgctggccaacctcttttccatgaggtcattcataaagatt
gaagaagatacgtggcagaaatactacctggaaggagttgctaatgaaatgtatacagag
tatctttctagtgcctttgtcggtctgtcattccctgctgtttgtgaactggtttttgcg
aagttaaagctcttaatgatagccatagaatacaagtcggaaaaacgggaaagcagaagc
cgaaagcgtatattaatcaatcctggaaaccatgtgaagattcaagagggtactttagga
ttcttcattgcaagcgatgccaaagaagtaaaaagggcatttttttactgcaaggcctgt
cacgatgacatcacagatcccaaaaggataaaaaaatgtggctgcaaacgactgatctat
tccaagatgtccatctacaagagaatcaaactggcatgttgttttgattgcggacgctct
gagcgtgactgcacttgcatgtcaggcagtgtgcatagtaacatggacacccttgagaga
gccttcccactttcttctgtctctgttaatgattgctccaccagtttacgtgcctttgaa
gacgagcagccgacgacgctgtcgcccaaaaagaagcagcgaaatggaggcatgagaaat
tcacccaactcctcgcccaagctgatgcgacatgatcccttattaatacctggcaatgaa
caagtagacaacatggactgcaatgtgaaaaaatatgattctacaggaatgtttcattgg
tgtcctgccaaggaaattgacaaagttattttgacccgcagtgaagcagccatgacagtg
ttaagtggccatgtggtcgtctgcatttttggagacatgacatcagcactgattggacta
agaaactttgtgatgccattaagagccagtaacttccactaccatgagctcaagcacatt
gtgtttgtgggatcccttgaatatctgagaagggaatgggagacaatgcacaacttcccc
aaggtctcaatcttgcctggtacaccattaagtcgagctgatttaagggctgtcaacatc
aacctctgcgacatgtgcgtaatcctgtcagccaatcagaataatattgatgatacttcg
ctgcaggacaaggaatgcatcttggcgtcactcaacatcaagtctatgcagtttgatgac
agcattggggtcttgcaggctaattcccaaggattttcaccaccaggaatggacagatca
tcgccagataatagcccagttcatggcctcctacgccaaccctccattacaacaggaatt
gatatccctattataacagaattagctaagcctggcaaacttctgcctttggtttcaatc
agtcaggaaaaaaacagtggaactcacattctaatgataactgaactggtgaatgattca
aatgttcagtttctggaccaagatgatgatgatgatcctgatacagaactgtatctcaca
cagccttttgcatgtggaactgcatttgccgtcagtgtgttggattccctcatgagtgca
acatacttcaatgacaatattctcacactgatacgtactttggtaaccggaggagccaca
ccggagctagagtcgcttattgctgaggagaatgcactaaggggaggctacagcacaccc
cagaccctcgccaacagggacaggtgtcgggtggcccagctggctttgctagatgggcct
tttgcagaccttggggatggtggctgttacggggatctgttttgtaaagctttgaaaaca
tacaatatgctttgctttggaatataccgattgagagatttcaatcaaagcacgcctagc
caatgcaccaagcgttttgtaatagccaatccaccttatgagtttgaacttgtgccgaca
gactggatcttctgtttgatgcagtacgaccacaatgctggccagtcccgggctagtctc
tcccattcttcccattcctcttatacatctagcaagaaaagctcatcggttcattctatc
ccagcaactgcaaaccgtcagaaccgcactaagaccagggactcccgggaaaagcagaat
gcgacaaggatgaatagaatgggccaagcagaaaagaaatggtttacagatgagccagaa
aatgcctaccccagaaacattcaaatcaagcccatgagcacacacatggccaatcagatc
aatcagtataagtctacaagcagcttgataccacctatcagagaagttgaagatgaatgt
tga
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