Sceloporus undulatus (fence lizard): 121925016
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Entry
121925016 CDS
T07740
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sund03016
]
121925016 (TARBP1)
03036 Chromosome and associated proteins [BR:
sund03036
]
121925016 (TARBP1)
Enzymes [BR:
sund01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
121925016 (TARBP1)
Transfer RNA biogenesis [BR:
sund03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121925016 (TARBP1)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121925016 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
AAA_lid_2
Motif
Other DBs
NCBI-GeneID:
121925016
NCBI-ProteinID:
XP_042312637
LinkDB
All DBs
Position
1:68918359..68977907
Genome browser
AA seq
1452 aa
AA seq
DB search
MEAVLAEALLSQCPDAEALLRAVGGGEGEGAALSAERAEALRFLLERAEGAGAEKLAEAA
VARCLPALLGDEASAPPPRLVRASCGLLRRCVSLGGGPLAAKVATEALEAAAAAGRRRRV
SPADVEALSSVASRLEEPELLKQTVEAALRLLWDQDQEEPALLVAGRLLPALGRNHGDAA
AAALGAVWDGLMAPSPPLEEPWRLNRTLLALSALSDALFSPAEGDGGGEGAPRLDARRRS
GFWKAVQKGLTARDGLCRKRARYLLKRALDASEKGPGGGCRSGQEGEEGNGPCLFWWCTE
KNDQLTQFWGNYILIMEILEGNQIHVIKPVLPKLNSLYEHALSEKKDCWVFHPSWHMCIY
KRMFESENKTLAKEGVVHFLEIWQTKCLPTSPGFSEFVIGPLMDALSESFLYSRLPGQTV
GTCPPLGMKLQAFLATFFTSLPAEEKGTFLLKFIQKMSNRHWCAVPILFFSMALAHIPPY
RALDVGGLLSLRDVLQCTMITHQILLRGAAQCYLLQAAILLTDIEKVSLSDISNFIVCLR
PEESLGRGTILWRKLCDWLCINDMHFRKALNFSVPQDKTLLSVHVQFLVEDYLKTPTASS
EDCLMPDWSDAKLVATMIFLAADVEDIKHRTEWIELKPLLNPLLDVLLKLGTNPYISSQK
SDKSLQLLLKLLQTCSRKWSSPQTDGITTLLQKSLMSATESILHFLLRRLTAHELNTISD
LQRCDLYLGVLLEITSFSSMKDWKNGSSVGSFISSLINASLSNLQETSYEEEVKLGKQIQ
KVVSLASLSTVCEIIDQTPDLQFEFLPSVDALKTVISCTQLSCVLKKPSCMEKSSSLEET
ASYQGWGKIVARFIHDQWVCLNFVLNNQNISKDQNLEQFFLDEQKYPRTLHSALEAITVL
PSDHVLPVFRCMKILVPKVNNLNLVWFFGLIQTGQNKAALKMNRAILSVGGECCGGLSVT
AKTYKLKLIGEGMECFCSLQGEFMLKSKIHYYVNSLQHRIKNRLWQTLLVLFPKLHEDIL
ARIVDRILQAGHSNNQASVKYLIEWSIVLILHKFPQFLQNFWDCFNYGEDQLKTSICTFL
AVLSHFDTVLQNTSEKIPALKKALVVVLQWCFHHNFSVRLYALIALKKIWGMCKASFVND
FEALAPVIECSLNQAESMHGSGNAKKNWQRIQKHFFFENFHPLKDYCLETIFYTLPRLSD
IAEEEWIPISKFKAFTDLPLSSTFPCSHSCTTLLDLKPSDWCQQDRGLNSSESCNERKWT
DVQKKIIPWKDSMSDLDLELVFQDRTTKLGKSNSKLIVVASLLDKPTNLGGLCRTCEIFG
VSALIVGSLHYTNDKQFQYLSVSAEQWLSLIEVKPFQLVDYLEQKKIEGYTIIGVEQTAK
SCDLTEYCFPEKSLLLLGNEHEGIPANLIQQLDTCVEIPQQGVIRSLNVHVSGALLIWEY
TRQQIVKEKKSR
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtgttggccgaggcgctgctctcgcagtgcccggatgcggaggccttgctg
agggccgtcggcggcggcgaaggagagggggccgcgctgtcggccgagcgagcggaggcg
ctgcgtttcctcctggagcgggcggagggggccggggccgagaaactggccgaggcggcg
gtggcccggtgcctgcctgcgctgctcggggacgaggcctctgcaccgcctccgcgctta
gtgagggcctcgtgcgggctcctgcggcgctgcgtctccctcggagggggccccttggcg
gcgaaggtggccacagaggccttggaggcggcggcggcggccgggaggaggaggagggtc
tcccccgccgacgtggaggccctctcctccgtggcctctcgcttggaggagcccgagctc
cttaaacaaaccgtggaggccgctctgaggcttttgtgggaccaggaccaggaggagcct
gcgttactagtggctgggaggctcttgcctgccctggggaggaaccacggcgacgccgcc
gccgcagcactcggggcggtctgggacggactcatggcgccctcgccgcctttggaggag
ccctggagactgaaccggaccctcctggccctcagcgccctctccgacgccctcttctct
cccgcggaaggggacggaggaggggaaggggctccccgcctggacgccaggcgacgcagc
ggcttttggaaagcggtgcagaaggggctgacggcccgcgacggactctgcaggaaaaga
gcacgataccttttgaagagagccctggacgcctccgagaaagggcccggagggggatgc
aggagcggccaggagggagaggagggaaatggaccctgtctgttttggtggtgtactgaa
aaaaatgatcaacttacgcagttttggggaaattacattttaattatggagattctggaa
ggaaaccagatacatgttataaagcccgtattaccaaaattaaatagcttatatgaacat
gcgctatcagaaaaaaaagattgttgggtatttcatccatcatggcatatgtgcatttac
aagcgaatgtttgagagtgaaaacaaaacattggcaaaagaaggtgttgttcactttctt
gaaatctggcaaacaaaatgtcttcccacatcaccagggttttcagagttcgttattggc
cctttaatggatgctctttctgaaagttttctctatagcagattaccaggtcagactgta
ggaacctgtcccccattaggaatgaagcttcaggcattcctggctactttcttcacaagc
cttccagcagaagagaaaggtacttttttgttaaagtttatacagaagatgagcaataga
cactggtgtgctgttcccattttgtttttctccatggctctggcacatattccaccatac
agagctctggatgttggaggacttctatctctgagagatgtcctgcagtgtactatgatc
acacatcagattcttctacgaggagctgcccagtgttatcttcttcaagcagcaatactt
ttgacagatattgagaaagtatccctttcagatatttcaaacttcattgtatgtctgaga
ccagaagagtcattaggcagaggaactattttgtggagaaagctttgtgactggttgtgt
ataaatgacatgcactttcgaaaagctttaaacttcagtgtgcctcaagacaaaacattg
ttgagtgttcatgtgcaatttcttgtggaagattatctgaaaacacctacagccagttca
gaagattgccttatgccagactggtctgatgctaaacttgttgctacaatgatttttctg
gctgcagatgtggaagatataaaacacagaacagaatggattgagttgaagccccttctg
aacccactactggatgtcttgctcaaacttggcactaatccatacatctcatcacaaaaa
tcggataaaagcctacagctgctgttgaaattgctgcagacctgttcaaggaaatggtct
agtccacaaactgatgggataacaacacttcttcagaagtcacttatgtctgccacagaa
agtattctgcattttctgcttagaagacttacagcacatgaattaaatacaatttcagat
ctgcaacgctgtgatttatatctaggggtgttattggagataacaagcttctcttcaatg
aaagactggaaaaatggatcctcggttggcagttttatctcttctctgataaatgcctcc
ctctccaatctgcaggagacgagctatgaagaagaggtaaaacttggaaaacagattcag
aaggtagtgagcttggcatccctaagcacagtttgtgaaattattgatcagacaccagat
cttcaattcgaatttctgccatccgttgatgccctaaaaacagttatttcctgtactcag
cttagctgtgtattaaagaagccttcctgtatggaaaaaagcagttctctggaggaaact
gcatcttatcaaggatgggggaaaatagtagcacgtttcatacatgatcagtgggtttgt
cttaattttgttctgaacaatcaaaatatttctaaggatcaaaatttggaacaatttttt
ctggatgagcaaaagtacccaagaacattacactctgcactggaagcaataacagttctt
ccttctgatcatgttctacctgtatttcgttgcatgaaaatattagttcccaaggtaaat
aatttaaatcttgtatggttttttggcctgatacagacaggccaaaataaagctgctttg
aaaatgaacagagcaatcctaagtgtgggtggtgaatgttgtggtgggttgtctgtcact
gccaaaacctacaaactcaagttaattggggaggggatggagtgtttctgttctctgcag
ggagaattcatgttgaaatcaaaaattcactattatgtaaattcgttacaacacagaatt
aaaaaccgattgtggcagacgttgctggttctgtttccaaaacttcatgaggatatttta
gcaagaattgttgacaggattctacaggctggacatagcaataatcaagcatctgtaaaa
tatttaatagaatggagtatcgtcttgattctacacaagttccctcagtttcttcagaat
ttctgggattgctttaactatggggaagatcagcttaaaactagcatttgcacgttctta
gcagtgctgtcacattttgatacagttctccaaaatacatctgaaaagattccagctttg
aagaaagcccttgttgtagttctacagtggtgttttcatcacaattttagtgttcggcta
tacgctttaattgctctgaagaaaatttggggaatgtgcaaagcatcatttgtgaatgat
tttgaagctttagctccagttattgaatgtagtctcaatcaagcagaaagcatgcatgga
tcagggaatgctaaaaagaattggcaacgtatccaaaagcacttcttctttgaaaatttt
catccgcttaaggactactgtctggagacaattttttacaccttgccacgtctttcagat
attgcggaggaggaatggattcctatctctaaatttaaagcattcacagacctcccactg
agctcaacttttccatgttcccattcttgcactacacttctggatttaaagccaagtgac
tggtgccagcaagataggggtttgaattcatctgaatcatgtaatgaaaggaaatggaca
gatgttcaaaaaaaaattattccttggaaagacagcatgtcagatttggatctggagctt
gtatttcaagatcgaactaccaaacttggcaaatcaaacagtaaattgattgttgtggct
tctctccttgataaacccaccaatttaggaggcttgtgtcgtacatgtgaaatatttggt
gtgtctgctctaatcgttggcagccttcattacacaaatgacaaacaatttcagtacctc
agtgtttctgctgagcagtggctttctcttattgaggttaagccgtttcagcttgttgat
tatttggagcagaagaaaattgaaggctacacaataataggtgttgagcaaacagctaaa
agttgtgatctaacagaatactgctttccagagaaatcgctgctgctgctaggaaatgag
catgagggaattcctgcaaatctgattcagcagttggacacttgtgtagaaattccacaa
caaggagttattcggtcacttaatgttcatgtaagtggtgctctactcatctgggaatat
actagacaacagattgtcaaagaaaaaaaatcaagatga
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