Sceloporus undulatus (fence lizard): 121925235
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Entry
121925235 CDS
T07740
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121925235 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sund03041
]
121925235 (CDC40)
Spliceosome [BR:
sund03041
]
Complex C
Other components
Step II factors
121925235 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
121925235
NCBI-ProteinID:
XP_042313054
LinkDB
All DBs
Position
1:complement(109968171..110035147)
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AA seq
604 aa
AA seq
DB search
MSTDGKSFAGSGRPLRSRQDVAAIAALASYGGSDWTRAPRRRRRAQPPREGPWRRRRRRR
CRAPPGLSALPGAAAAAPRGLSPAVAVKEDVETGVHLDPATKEVQYNPSYDTMFAPEFGP
VNPFRTQQMAAPRNMLSGYTEPAHINDFMFEQQRRTFATYGYALDPSIDNYEVSTKYIGS
VEEAEKNQGLTVFETGQKKMEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQRE
LDEITAKRQKKGKHEDDKPGEEKTILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCY
LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAV
RDICFNNAGSQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGM
SDKKIVQWDVRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKY
IAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVD
FSPDMSYVISGDADGKLNVWDWKTTKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLI
KLWD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagatggcaaatcgttcgccggaagtggccgcccgctccggtcccgacaagat
gtcgcagccatcgctgcgctggcctcctacggcggctccgactggactcgggctccgagg
cgaaggaggagggcccagccgccccgtgagggaccgtggcggcggcggcggcggcgacga
tgccgagctccacccggcctctccgccctcccaggcgctgctgctgctgcccctcgtgga
ctcagccccgccgtggctgtgaaggaagatgtggaaacaggagttcaccttgatccagct
accaaggaagttcagtataacccatcttatgataccatgtttgctcctgagtttgggcca
gtgaatccatttaggactcagcagatggctgcaccaaggaatatgctttctggatacaca
gaaccagcacacattaatgatttcatgtttgaacaacagagaaggacatttgcaacttat
gggtatgctttggatccctcaatagataattatgaagtttctactaaatatattggatct
gttgaggaagcggaaaaaaatcaaggtttaactgtgtttgaaacagggcaaaagaaaatg
gagaaaaggaagaaattcaaagaaaatgacgcatctaatattgatggcttcttgggacca
tgggcaaaatatgttgatgaaaaggatgttgcaaagccttcagaagaagaacaaagggag
ttggatgaaataacagcaaagaggcaaaagaaaggcaaacatgaagatgataaacctgga
gaagaaaagactattttgcatgtcaaagagatgtatgactatcaagggaggtcctatctt
catgttcctcaggatgttggagttaacctacgttcaacagtaccccctgaaaaatgttat
cttcctaaaaagcaaatccatgtatggtctggtcatacaaagggagtcagtgctgtcagg
ctgtttcctctttctggccacctgctgttgtcctgctccatggattgtaaaattaagctc
tgggaagtgtatggtgaacgaaggtgcttacgaactttcattgggcacagtaaggctgtt
agagatatctgctttaataatgctgggagccagtttcttagtgcggcatatgaccggtat
cttaaactgtgggacactgaaacaggtcagtgtatttcaagattcactaacagaaaggtt
ccttactgtgtcaaattcaatcctgatgaagataagcagaatctttttgtagcaggaatg
tcagataagaaaatcgtacagtgggatgttcgaagtggagaaattgttcaggagtatgat
aggcatttgggtgctgtcaacactattgtatttgtggatgagaacagaagatttgtgagc
acatctgatgacaagagtttgagagtctgggaatgggacattccagtagatttcaagtac
atagcagagccaagtatgcactcaatgcctgcagtgactttgtccccaaatggaaagtgg
ttggcttgtcaatccatggacaatcagattttgatttttggagctcagaacaggttcagg
ttgaataaaaagaaaatcttcaaaggtcatatggtggcaggttacgcttgtcaagtagat
ttttcacctgatatgagttacgtgatatctggtgatgcagatggaaaactgaacgtctgg
gactggaaaactactaaactgtatagtagattaaaagcccatgataaagtctgtataggt
gcagtgtggcacccacatgaaacatctaaggtcatcacctgtggatgggatggtctcatt
aaactctgggactga
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