Sceloporus undulatus (fence lizard): 121925402
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Entry
121925402 CDS
T07740
Symbol
BRCA2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03440
Homologous recombination
sund03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121925402 (BRCA2)
03460 Fanconi anemia pathway
121925402 (BRCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sund04121
]
121925402 (BRCA2)
03036 Chromosome and associated proteins [BR:
sund03036
]
121925402 (BRCA2)
03400 DNA repair and recombination proteins [BR:
sund03400
]
121925402 (BRCA2)
Ubiquitin system [BR:
sund04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
121925402 (BRCA2)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
121925402 (BRCA2)
DNA repair and recombination proteins [BR:
sund03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
121925402 (BRCA2)
FA (Fanconi anemia) pathway
Downstream FA components
121925402 (BRCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA2
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Mx_ML
Motif
Other DBs
NCBI-GeneID:
121925402
NCBI-ProteinID:
XP_042313444
LinkDB
All DBs
Position
3:34042832..34084513
Genome browser
AA seq
2884 aa
AA seq
DB search
MGKTRPLSPLRMRRRDLAPEFVFRGRDAVAEAAQEPGYLTMPMMIKKNVDTSSKKPSFFE
IYKARCSDSDLGPISINWFEELSSEAPPYDSKRPEYADHKTNSLDRTIFKTPKVKLSLNS
LTASTPMIFKDQNKTVPSCPSLIKELDQNSTETDKKVNEAITTAKNVDQSNEAVAPSSAC
LLVSPSGLREASRTPPNNKCGLSRSLLCTPKFFEVEISKGISVSLGAEADPDMSWSSSLA
TPPTLSPTVIIDRGNYSISGTKQHNETIELIEYSPFFKSDRSLKVNRINMESAARIEDVR
AEADSKIHRRISTSTATNSRGSMKSSLKTISSISSLRRRPKKFIYTVNNTPAYHEEGAAL
GNGTSACLVSNCTDFKSCISEVSETTIRNAEKTEEHSSTNKYGIGEKQQIGADKSCIPTN
IFHETSCNENLKAESDFTDMPSICLQTNNKKETVIVPSPIVVYQQTESSKNKFPGICHME
NLDKDCGGNNVSLTDFSSVQEAILEGSAVAMLDSKKENKERALELAAQHSLTGDTQMAEH
GCWSKTDPTNIKELSMVTVSENNLERRQSLSLDLRENATNSKQKRLECMMDSKTKSFGGF
KTASNKEIKLFDNNIRKGKLLFSDIEEQFLDDFPGDEVQNASNKNADENAKTSLIRRNEL
NEKSSDLSYVSDSLMNLIQLSDTQSSFSDCANRTFQNRFKNQETEEKQNLTASQEAEVAE
LSNILEETGSQFEFTQFREHKTMLYDNTCEVSGKCDQNNINSEVWSDTDFEEAFSEKVQR
SDDMSPNKHIDIPVESKIQSQSNADNTLMKSSSRKHIQHFVPVISASLESGVWGCSSSEG
KQINMSAEIINKISKPIMDCDKVDEMLNPYKITCQCNSSNDKWGNLNCKKEISADLHQRA
KEINLKYMMKNNAKDTNIYIKEHTENKSRAVNLNKIVQVTSTTEVNLKIVKKYFVHVTGN
ELPCSENNHSALGTPRLSGRGDTLCNYSLQETLSDMTCLGDVAKTEKNPAHSNADEKENF
NSNQEGEMINNSESGYLLLKVDTVADGNIVADESKMLHLLTGSCLGEELGGTPGTRSNKR
AIASMKREVVLSQNDMLFGSRDPEIYETRKEMQISAVGFQTASGKQIAITDESLAKAKHL
LSEETFSPGNQNAVALHPKDNFEEPVDILLDTEKLKTTKELPLDLSAVESDLICCTKKEA
MYTVNEDLLANDNLDQIPGKNVSKTLFIDSDTYHDLYVEELGTYSKQVLECWSSRNKSNA
SVASSNKNLESLALPCNATTETNYIDLKSRHSTLHHSQDASNEKESLPQDLAWISEEPTS
SKIFNAENSFGEIPKNKSADKKLLNTNSLHKNSASEEADSVSKVLKARPGAFSTASGKTV
RVSEEALKKVKHLFGEDSCKSIKQDMKSQSKTSEHNILESCSDALGSREYVPICNYLGVE
KITVENSGASQCPTAKEHCERDQKLQHSASASSNVVSESSCQTVNKWSDTKPSNKLGCSK
SDFSIDNCGFFSTASGKAVQLSEESLRKARLLFSEIENDSLGHQTHVSDCDDSYCKISSV
RNKGNQNKPLIPQGKRLPNAEVDSNISCGFSTASGKQVHISQKALQNVTELFKEFSDDVS
SNGFFVDQQNLGQGHISSIKEPATKMIVEDEIASESKPQDRCNTLYLTTNIPDENNSKNP
LSIKIPMCVCGTQKCKHLLEPEKSFSYSKETKPLKTTQVRLGKSETKNSAAHDTAAEGNP
YSHCHIYSQIPEDYLELEVSESARAFMEDDALTVSEVEKNKKALVLNSEKNNFYSYRRTG
KRCMEKENTFGEPPIKRKLLPEFDQSERSSLKASKSSLDGTMNDRRTCISSISLKPVFCG
PSSKERQEVLNPNFTTPGQDLKMSKLDRLQQHITKHSSSRSSCLFQPFSKSFREESKKSE
NPTAKKPIKVFVPPLKRQSSASEDGINSKESFCLSNNTVPGTEDLNYTEVHETFIQPQKE
NCKTISAIDSEFRETDSDLTEIITSLHCARNLQEMRILKKQKKVIGPQPGTLYLIKTSAA
SCRISLKTAVDGKFPGSYRSEQLYAFGVSKQCLNINSSNAEDFHFVIQDFFSRECFLEGH
GIQLADEGYLIPSDDGKVGKEEFYRALCDTPGVDPKLISKSWACNHYRWIIWKLAAMEVA
FPQEFASKCLTPERVLLQLKYRYDVEVDKSCRSAIKRITERDDVAAKTLILCISRIISVS
TNMPHIFGSKSTAEENKRDVAIIEVTDGWYGIRAVLDPSLQSLLYKQKLTVGQKIVTHGA
ELVGSQDACSPLEAPESLMLKISANSTRCAQWYATLGYYRDPRPFTLPLSSLFSEGGIVG
CIDVIIQRIYPTQWMEKLSTGSYVFRNCRAEEREATKHTENRQKTLEALLAKIQAEFEKN
KGEGKRVLRSRTLTRQQIRSLQDGAELYEAVCNAADPAYMESYFSEEQLKALAIHRQMVN
DKKRAQIEEEFRKAVESAEQDKNSSCRRDVTTLIKLRIVDHRKEEKGKEVTLNIWRPSSH
VCSLLKEGNRYKLFHVAASPSKGRSEAATIQLTATKKTQYLQLPVCQEILSQVYKPRECL
KFSELLLESFQPACSEVDLVGYVVSLEKGTGFSTLVYLSDKDHNLIAVHICTDLKQFAVE
DIIIPSVLISATNLQWRPKFHSNVPTLFAGDHSTFSSNPKETYLQGIFNELRNTVQSNSC
FRKDAQCKLATLLQTDGPQVINLPREHDFAPFLSAWKSDAGNKHLIATPNRELRLQSPLA
LKKLNTKASGSLCSTKVKPELHETPKNSKKRKAMDLLSQVPSPPPVMPICTFISPSLKRA
FQPPRSSDTQHERVVKKPECMVGKPALKRSNESNVHLENYFVADEELAMINTQAFLNNIT
EERG
NT seq
8655 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaacacgccctctttctccactgcgcatgcgtcggcgtgatttggcgccggag
tttgtatttcgaggaagggatgcagttgctgaggctgcgcaggagccgggttacctaaca
atgccaatgatgattaagaaaaatgttgatacatcttcaaagaagccatctttctttgaa
atatacaaagcacgatgcagtgattcagacttagggccaataagtattaactggtttgaa
gaactcagttcagaagctccaccttatgactctaaaagaccagagtatgctgatcataaa
accaacagtctggatcgaacaatttttaaaacaccaaaggtaaaattgtctctaaatagc
ttaacagcatcaactccaatgatatttaaagaccagaataaaactgtaccatcgtgtcct
tctcttataaaagaactggatcagaacagtacagaaacagataaaaaagttaatgaagcc
attactacagcaaaaaatgtggatcaatcaaatgaagcggtggctccttccagtgcctgt
ctccttgtaagtccatctggtttaagagaagcaagcagaacaccaccaaacaacaaatgt
gggctaagcagaagtttgctttgtacaccaaagttttttgaggtagaaatatcaaaaggc
atttctgtgagcttgggagcagaagcagatcctgatatgtcttggtcaagctcattagca
acaccacctacactttctccaacagttataatagatagaggaaattattcaatttctgga
acaaaacaacataatgaaacaatagagttgattgagtatagtcctttcttcaagtctgac
agaagtctcaaggtgaatagaataaatatggaatctgcagcaagaattgaagatgtacgt
gcagaagctgacagcaaaattcatagacgtatttcaacatcaactgctactaatagtaga
ggatctatgaagtcaagtttgaaaactatcagctcaatttccagtttaagaagacgaccc
aaaaaatttatttatacagtaaataatactccagcttatcatgaagagggagccgctctt
ggaaatggaacatctgcatgccttgtgtcaaactgtacagattttaaatcttgtatctct
gaagtttctgaaacaactattaggaatgcagagaaaacggaagaacattcaagcactaat
aagtatggtattggagaaaaacaacaaataggcgctgataaaagttgcattcctacaaat
atttttcatgaaacttcatgcaatgaaaatttgaaagctgaaagtgattttacagatatg
ccatcaatatgcctacagacaaataacaaaaaagaaacggttattgttcccagtcccata
gttgtttatcagcagacagagtcaagtaaaaacaagtttcctggaatttgtcacatggag
aatttagataaagactgtggtggaaacaatgttagcctcacagattttagttcagtccaa
gaagccattcttgaaggatctgctgtggcaatgctagactcaaaaaaggaaaacaaagaa
agagctttggaattagctgcacaacattcgttgacaggtgatactcagatggctgaacat
gggtgctggtcaaagacagaccccacaaatataaaagaactgtctatggttacagtttca
gagaacaacttagagagaagacagagcctttcacttgatttaagggaaaatgcaaccaat
agcaagcagaaaagattagaatgcatgatggacagcaaaaccaaaagctttggtggcttc
aaaacagcatcaaacaaagagataaaactgtttgataacaacattagaaaaggcaagttg
ctgtttagtgacattgaagaacagtttcttgatgattttcctggtgatgaagtacaaaat
gcttcaaataaaaatgcagatgaaaatgctaagacttctttaattcggagaaatgagttg
aatgaaaaatcatctgatttgtcatatgtttctgattcactaatgaaccttattcagtta
agtgatacccaaagtagtttttctgattgtgccaataggacttttcagaacaggtttaaa
aatcaggaaactgaagaaaaacaaaatttaacagcaagtcaagaagccgaggttgctgag
ctttctaatatactggaggaaacgggtagtcagtttgaatttactcagtttagagaacac
aagactatgttgtatgataatacatgtgaggtgtctggaaagtgtgatcaaaataatata
aattctgaagtttggagtgatactgattttgaggaagcctttagtgaaaaggttcaaaga
agtgatgatatgtctcctaataagcatatagacatacctgtcgaatccaagatacagtca
cagagcaatgcagataatacattgatgaaatcatcaagcagaaaacatatccaacatttt
gttccagttatttcagcatctttggagtctggtgtttggggttgtagttcatctgaaggc
aaacagataaatatgtctgctgagattataaacaaaatttcaaaaccaataatggattgt
gataaagtggatgaaatgcttaacccttacaaaataacttgtcaatgtaactcttcaaat
gataagtggggaaacctcaactgtaagaaagaaataagcgctgatttgcatcagagagcc
aaagaaataaatcttaaatatatgatgaaaaataatgcaaaagataccaatatctatata
aaagaacacacagaaaataaatcaagagctgtaaacctgaataaaattgttcaggttact
agtactacagaagttaacctaaaaattgttaaaaaatactttgttcatgtgacaggaaat
gaattgccatgttctgaaaataatcacagtgcactaggcacacctcgtttatcaggccgc
ggagacactctgtgtaattacagtttgcaagaaacattgtcagatatgacatgtttaggt
gacgttgctaaaactgaaaaaaaccctgcacatagtaatgcagatgaaaaagaaaacttt
aattcaaaccaggaaggggaaatgatcaataattcagaaagtggctatttactactaaaa
gttgacactgttgctgatggaaacatagttgcagatgagagtaaaatgcttcatttgttg
actggttcctgtttaggggaagaactaggtgggacaccaggcactaggagcaataaaaga
gcaattgcttccatgaaaagagaggttgttttaagtcagaatgacatgttatttggctcc
cgtgatccagaaatttatgaaaccagaaaagaaatgcagattagtgcagtaggattccag
acggctagcggtaaacaaattgctattactgatgaatctttagctaaggcgaagcatctt
ctttcagaagaaactttttccccaggaaatcaaaatgctgtagctctacatcctaaagat
aattttgaagagcctgtggatatattgttagacactgagaagcttaaaactactaaagaa
ctgcctctggacctgagtgctgtggagtcagatttgatatgttgtactaaaaaggaggcc
atgtatactgtaaatgaagacttgttggcaaatgacaatctggaccaaattccaggcaaa
aatgtttcaaaaactcttttcattgattctgatacatatcatgatttatatgtggaggag
ttgggtacttattcgaagcaagttcttgagtgttggtcatctagaaataaaagtaatgca
tcagttgctagcagtaataaaaatcttgaatctttggctttgccttgtaatgctactaca
gaaactaattacattgatttaaaaagtaggcattccacactgcaccattctcaagatgca
agcaatgagaaagagtccctcccacaggatttggcttggatttctgaagaaccaacttca
tcaaaaatctttaatgcagaaaatagttttggagaaattccaaaaaataaaagtgctgat
aaaaaactgttgaataccaacagcttacacaaaaattcagcaagtgaagaagcagactca
gtttcaaaagtattgaaagctaggccgggtgcattcagtacagcaagtggtaaaactgtc
agagtttcagaagaagcattaaaaaaggtcaaacacttatttggtgaagacagctgtaaa
tccataaaacaggacatgaaatctcaatctaaaaccagtgaacataatatccttgaaagc
tgttctgatgccttgggcagtagagaatatgttccaatttgtaattacttaggtgtggag
aaaattactgtggaaaactcaggtgcatctcagtgtcctacagccaaagagcactgcgaa
agggaccaaaaattacagcatagcgcatctgcatcctcgaatgttgtgtctgagtcaagt
tgtcagactgtgaataagtggtctgatacaaagccttctaacaagcttggttgcagcaag
tcagacttttctatagataattgtggtttttttagcacagcaagtggcaaagctgtccag
ttatctgaagagtcattgaggaaagcaagactgcttttttctgaaattgaaaatgattca
ttgggtcatcaaactcatgtatcagattgtgatgacagttactgtaaaatatcttctgtc
aggaacaaaggcaatcaaaacaaacctctcataccccaagggaaaaggcttccaaatgca
gaagtggattcaaatatttcttgtggctttagcactgcaagtggaaaacaagttcacatc
tctcaaaaggctctccagaatgttacagagctcttcaaagaattcagtgatgatgtcagt
agtaatggtttctttgttgatcaacagaatttggggcaaggtcacatttcatcaataaaa
gaacctgctacaaaaatgatagtggaggatgaaattgcatcagaatctaagccacaggat
agatgtaatactctttatttaaccacaaatattcctgatgaaaataattctaaaaaccct
ttgagcattaaaatacccatgtgtgtgtgtggtactcagaaatgcaagcatcttttagaa
ccagaaaaatctttttcatattctaaagaaactaaacctttgaagacaacccaagtgcgc
ctgggaaaatcagaaacaaaaaactcagcagcacatgatactgcagcagaaggaaatcct
tattctcattgtcacatttattctcagattccagaagattatttggaattagaagtttcc
gaaagtgccagagcattcatggaagatgatgctctcactgtttcagaagtagaaaaaaat
aaaaaagcacttgtcttgaattctgaaaaaaataatttttattcatatagaaggactggg
aaaagatgcatggaaaaagaaaacacgtttggagagcctcctattaaaagaaaattgcta
cctgaatttgatcagtcagaaagatcatctctgaaagcctcaaaaagttctctggatggt
accatgaatgacagaagaacctgtatatctagtatttctttaaagccagtattctgtggc
ccttctagcaaagaacggcaagaggttctgaatccaaattttactaccccaggccaagat
ctgaaaatgtctaaattggatcgacttcaacaacatattacaaaacactcttcaagtaga
tcttcatgtcttttccagccgtttagtaagagctttagagaagaaagcaaaaaatcagaa
aatccaacagcaaagaaacctatcaaagtgtttgtaccacctttaaaaagacaatcaagt
gcttctgaggatggaattaatagtaaagaatctttctgcctgagtaacaacactgttcct
gggacagaagacctaaattataccgaagttcatgaaaccttcattcagccacagaaggaa
aattgcaagacaatatcagcgatagattcagaattcagagaaacagattcagatttaaca
gaaatcattacaagccttcactgtgccagaaacctacaagaaatgaggattctgaagaaa
cagaagaaagtcattggcccacagccaggcaccctgtatctcataaaaacatctgctgca
tcttgcagaatctctctgaaaactgcagtggatgggaaatttcctggttcttaccgtagt
gagcagttgtatgcatttggtgtttccaagcagtgcctaaatattaacagcagcaatgca
gaagattttcactttgtcatccaggattttttcagtagagaatgtttcctagaaggacat
ggaatccagttggctgatgaaggttatcttattcccagtgatgatggaaaagtaggaaaa
gaagaattctacagggctttgtgtgacacacctggtgtagatccgaagctaatttcaaaa
tcctgggcctgcaaccactataggtggatcatatggaaacttgctgccatggaagttgca
tttccacaggaatttgccagcaaatgtttgacaccagaaagggtactacttcagctgaag
tacaggtatgatgtagaagttgacaaaagttgtcggtcagccatcaaaagaataactgag
agagatgatgttgccgctaaaacactcatcttgtgcatttctagaatcatatcagtaagc
acaaatatgccccacatctttggcagcaaaagcactgctgaggaaaacaaaagagatgta
gccataattgaagttacagatggctggtatggaattagagctgttttagatccctctctt
cagtcactgttgtataaacagaaattgactgtaggtcagaagattgtcacacatggagca
gaacttgtggggtctcaggatgcatgctctccactggaagcaccagaatcccttatgcta
aagatttcagctaacagtactcgatgtgcccaatggtatgccacattaggatattatcgg
gatccccggccattcacattacctttgtcatcactcttcagtgaaggtggaattgttggc
tgcattgatgttattattcagaggatttatcccacacagtggatggaaaaattatccaca
gggtcctatgtatttcgtaattgtcgagctgaagaaagagaagctacaaagcatactgag
aacagacaaaaaactctagaagcattgcttgcaaaaatacaagctgaatttgaaaagaat
aaaggagaaggcaaaagagttttgcgatcgcgcacattaaccaggcaacagattcgctct
ctacaagatggtgctgagctttacgaggcagtttgtaatgctgctgatccagcttacatg
gagagctatttcagcgaagaacaattaaaagctttggctatccatagacaaatggtaaat
gataaaaaaagagcacagatagaagaagaattcaggaaggctgtggaatctgctgagcaa
gataaaaacagttcctgtagaagggatgtaaccactctcattaaactacgaattgtggat
cacagaaaagaagaaaaaggaaaagaagttacattgaacatctggcgcccatcatcacat
gtctgtagcctcctaaaagaaggaaaccgatacaaactcttccacgtagcagcatcccca
tcgaaaggcaggtcagaagctgccactatacagctaacagcaaccaagaaaactcagtat
ctacagctgccagtgtgtcaagagattctgtcacaagtttacaaaccaagggagtgtctg
aagttcagtgagctactgctggaatctttccaacctgcttgttctgaagtggatctggtg
ggatatgttgtttccctcgagaaagggacaggcttttctacattggtgtatttgtcagac
aaagatcataatctaatagcagtccacatctgtacagatcttaagcagtttgctgttgag
gacataattattccttctgtgttgatctctgcaaccaatcttcagtggagacctaaattc
cactcaaatgttcccactttatttgctggtgatcattctacattctcctcaaatccaaag
gaaacctatcttcaaggaatatttaatgaactgagaaatactgtacagagtaatagctgc
tttaggaaagatgcacaatgcaaactggcaactttactccaaaccgatggtccacaagtg
ataaacttgcccagagaacatgactttgctccatttctttctgcttggaaatctgatgca
ggaaataaacatttgattgcaactcctaacagagagctaagacttcagagccctttggca
cttaaaaagctaaatacaaaggcatcaggttctctgtgctcaacaaaagtgaaaccagaa
ttacatgaaactcctaagaactctaaaaagagaaaagcaatggatttgctcagtcaagta
ccttctcctccaccagtgatgccaatttgcacatttatttctccatctttgaaaagagca
tttcaaccacctcgaagctctgatacacaacatgaaagagtggtgaaaaaacctgaatgt
atggttggaaaacctgcactgaaaagatcaaatgagtctaatgttcatcttgaaaactat
tttgttgctgacgaagagcttgcaatgataaatacacaagctttcttaaataacattaca
gaagagagaggttga
DBGET
integrated database retrieval system
