Sceloporus undulatus (fence lizard): 121925482
Help
Entry
121925482 CDS
T07740
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04136
Autophagy - other
sund04140
Autophagy - animal
sund04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121925482 (ATG16L1)
04136 Autophagy - other
121925482 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121925482 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sund04131
]
121925482 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
sund03029
]
121925482 (ATG16L1)
Membrane trafficking [BR:
sund04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
121925482 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
121925482 (ATG16L1)
Mitochondrial biogenesis [BR:
sund03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121925482 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
eIF2A
WD40_RFWD3
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
CCDC93_CC
Ge1_WD40
Beta-prop_SPT8
INO80F
Fez1
Beta-prop_WDR19_2nd
AP5B1_middle
DUF2332
Lipoprotein_6
HEF_HK
Peptidase_M15_4
Vma22_CCDC115
PUMA_CC
HTH_6
FUSC
Phostensin_N
YabA
Motif
Other DBs
NCBI-GeneID:
121925482
NCBI-ProteinID:
XP_042313613
LinkDB
All DBs
Position
3:complement(217042126..217066337)
Genome browser
AA seq
623 aa
AA seq
DB search
MSSGLRAASFPAWKRHILDELRRRDRLQRQAFEEIILQYNKLLEKSDFHTVLADKLQVEK
YDLPGRHEISPGHDGARNDVHLQEIAQLRIKHQEELTELHKKRGELAQSVIDLNNQIQQK
DKEMQINNAKIAEYLQKIAELETECQDLRNKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVLADETSDPAEETSPVRAVTRTSSKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDTAR
RRSLTSCPAPQDTVDVHQGVGKEVRVPNTAVCVFDAHDGEVNAVQFSPGSRLLATGGLDR
RVKLWEVCGDNCELKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDHRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDLVCTEQCVMS
GHFDKKIRFWDIRTECVVREIELLGRITALDLNPERTELLTCSRDDLLKIIDLRVNTVKQ
TFSAQGFKCGSDWTRVVFSPDGNYVVAGSAEGSLYIWNVLTGKVERVLSKHHSNSINAVA
WSPSGAHVVSVDKGNKAVLWSEF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggactccgggcagcgagcttccccgcctggaagcggcacatcctggatgaa
ctgaggcgacgggaccggctgcagagacaggcttttgaagaaatcatattacagtataac
aagcttttagagaagtcagatttccatacagtgttggctgacaagctgcaagtggaaaag
tatgatttgccaggtcggcatgagatcagtccaggacatgatggggcaaggaatgatgtt
catttgcaagaaatagcccagctaagaattaaacatcaagaagagctgacagagctgcac
aagaaacgtggcgagcttgcccagtctgttattgacttgaacaaccaaatacaacagaag
gacaaagagatgcaaataaacaatgcaaagattgcagaatatttgcaaaagatagctgaa
ttggagacagaatgccaagatctgcgtaacaagctacaagatcttgagcgagccaatcag
actcttaaggatgaatatgatgctctccagattacctttactgctcttgaggaaaagcta
agaaaaactactgaagataaccaagagctggtaacccgatggatggcagagaaggctcag
gaagctaatcggctcaatgcagaaaatgagaaagattcaagaagacggcaagccaggctt
cagaaagagctggcagaagctgcaaaagagccactaccagttgaacaggatgatgatatt
gaagtgcttgcagatgaaacctctgatccagctgaggagacctctccagtgcgtgctgtt
acacggacatccagtaagcgactatcccagccagctggaggccttctggactctatcact
aatatctttggtctgtctgagtctccccttttgggacatcactcttctgatactgcaagg
aggcgctctttgacatcatgtcctgcccctcaagatactgtggatgtacatcaaggtgta
ggcaaagaggtgcgagtcccgaacactgcggtgtgtgtctttgatgctcatgatggagag
gtgaatgcagtgcaattcagccctggttctaggttattggcaacaggtggcctagaccgg
agagtcaagctctgggaagtctgtggagacaactgtgaactcaagggctccctatctggt
agtaatgcagggattacaagcatagaattcgacagtgctggttcttatttattagcagct
tcaaatgattttgccagtaggatctggactgtagatgatcatcggttacggcacacgctc
acagggcatagtggaaaagtcttgtcagcgaaattcctattggacaatgcacgcattgtg
tctgggagtcatgacagaaccctcaagctgtgggacctgcgcagcaaagtctgtataaag
actgtgtttgcaggctccagctgtaatgatcttgtctgcacagaacaatgtgttatgagc
ggacactttgacaagaaaattcggttttgggatattagaactgagtgtgtggtacgggaa
attgaattgcttggcaggattacagctctagatctcaacccagagagaacagagctcctc
acctgttctcgagatgatctgttaaagattattgatctcagggtcaatactgttaaacag
actttcagtgcccaagggtttaaatgtgggtctgattggaccagagttgtattcagtcct
gatggaaattatgtggtagctggctcagcagaaggatcactctatatttggaatgtgctc
acaggaaaggtggaaagagtcctgtccaagcatcacagtaattcaatcaatgctgtggcg
tggtcaccatctggagcccatgtggttagtgtggacaaaggaaacaaggctgtgctgtgg
tctgaattttga
DBGET
integrated database retrieval system
