Sceloporus undulatus (fence lizard): 121925485
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Entry
121925485 CDS
T07740
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sund04040
]
121925485 (TRPC1)
Ion channels [BR:
sund04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121925485 (TRPC1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
DUF2157
MTR4-like_stalk
Dsc3_C
RIN1
Motif
Other DBs
NCBI-GeneID:
121925485
NCBI-ProteinID:
XP_042313621
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Position
3:235808074..235841947
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AA seq
783 aa
AA seq
DB search
MAALYQSADPSASASPNKLLALKDVRQVKEDTTLDEKLFLLACDKGDYYMVKKLLEENSA
GEMNINCVDVLGRNAITITIENENLDILQLLLDYGCQSTDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVG
CECTLCTAKNKKDSLRHSRLLFRLDIYRCLASPALIMLTEDDPILRAFELSADLRELSLV
EVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTASDEHVDKRGLLEERMNLSRL
KLAIKYNQKEFVSQSNCQQFLNTVWFGQMAGYRRKHTFKKILTVLTVGIFWPLLSFCYLL
APKSRIGRIIHTPFMKFIIHGASYFTFLLLLKLYSVVYNEDKKNTMGPALERIDYLLILW
LIGMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDFAERKDWD
AFHPTLVAEGLFAFANVLSYLRLFFMYTTSSVLGPLQISMGQMLQDFGKFLGMFLLVLFS
FTIGLTQLYDKGFTVNEEKDCAGIFCERQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTR
FNYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLS
YFDDKCTLPPPFNIIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWKNLKQKRDEN
YQKVMCCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAIFY
QRN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctttaccagagcgcggacccctcggcctcggcctcccccaacaagctcctg
gccctgaaggacgtccggcaggtgaaggaggacaccaccctcgacgagaagctcttcctc
ctcgcctgcgacaaaggtgattattacatggtgaagaagcttttggaagagaatagtgct
ggtgaaatgaatatcaattgtgtggatgtccttggaagaaatgctattacaataactata
gaaaatgagaatctagatatactacagcttctcctagattatggttgccagtctacagat
gcgctcttggtggccattgactcagaagttgtgggggctgtggatatactacttaatcat
cgaccaaaacgatccagtagaccaacaatagttaaattaatggaacgtatacaaaatcca
gaatattcaacaaccatggatgtggcaccagttattttagctgctcaccgtaataactat
gaaatccttactatgctgttaaagcaggacgtgtcattacccaaacctcatgctgtgggc
tgtgaatgcacactgtgtacagccaagaacaaaaaagatagcttacggcactccaggtta
ctattccgtcttgatatttatcgatgtttggccagtcctgccttgataatgttgacagaa
gatgatccaattctgagagcctttgaacttagtgcagacttaagagaactaagtcttgta
gaagttgaattcagaaatgattatgaagagctagcccagcagtgtaaaacctttgctaag
gatctgcttgcacaggcacggaactcccgggaacttgaagttattctgaaccatacagca
agtgatgagcatgtggataaaagaggactgttagaagaaagaatgaatttgagtcgttta
aagcttgctattaagtataatcaaaaggaatttgtttctcagtctaattgccaacaattt
ctcaatactgtctggtttggacaaatggctggttatcgtcgcaagcacacatttaagaag
attttgacagtcttaacagttggcatcttttggccactgctatctttttgttatttattg
gcccccaaatctcgaataggccgaatcattcacactccttttatgaagtttattattcat
ggagcttcatatttcacatttctgctgttacttaaattgtactcagttgtatacaatgaa
gataaaaaaaacacaatggggcctgcattggagagaatagactaccttctaatactgtgg
ctcattggaatggtgtggtcagatgttaaaagactctggtatgatggtttagaagatttt
ttggaagaatcccgtaatcagcttagttttgtaatgaattcactctatttggcaactttt
gccctgaaagtagttgctcataacaagttccatgattttgctgagaggaaggattgggat
gctttccatcctacactggtggcagaaggtctatttgcttttgctaatgttcttagttac
cttcgacttttcttcatgtatacaacaagctcagtcctcgggccacttcagatttcaatg
gggcagatgttgcaagactttggaaaatttcttggaatgtttctccttgtgttgttttca
tttacaattgggctgacccaactctatgataaaggtttcactgtgaatgaagagaaagac
tgtgctgggatcttctgtgagcgacaaagcaatgacacattccactcgtttattggaacc
tgctttgctctgttctggtacatattttcacttgcacatgtagctatatttgtcaccaga
tttaactatggtgaagaactgcagtcttttgtgggcgctgttattgttggcacgtataac
gttgtagttgtgattgttcttaccaagctcctcgtggcaatgcttcataaaagctttcag
ctaatagcaaatcatgaagataaagaatggaaatttgcgcgtgccaagctatggcttagc
tattttgatgacaaatgcacactacctccacctttcaatataattccttctcccaagact
atctgctatctatttaatagcctcagtaagtggatctgttctcatacatcatctggtaaa
gttaagcggcaaaatagcttaaaggagtggaaaaatctgaagcaaaagagggatgagaat
taccaaaaggtgatgtgttgcttggtgcatcgttatttgacttccatgagacagagaatg
caaagcactgatcaggcgactgtagaaaatctcaatgaactacgacaagacttgtcaaaa
tttcgaaatgaaatgagagacttgcttggcttccggacttcaaaatatgccatattttat
caaagaaattaa
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