Sceloporus undulatus (fence lizard): 121925529
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Entry
121925529 CDS
T07740
Symbol
VCL
Name
(RefSeq) LOW QUALITY PROTEIN: vinculin
KO
K05700
vinculin
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund04510
Focal adhesion
sund04517
IgSF CAM signaling
sund04518
Integrin signaling
sund04519
Cadherin signaling
sund04520
Adherens junction
sund04810
Regulation of actin cytoskeleton
sund04820
Cytoskeleton in muscle cells
sund05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121925529 (VCL)
04518 Integrin signaling
121925529 (VCL)
04519 Cadherin signaling
121925529 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121925529 (VCL)
04520 Adherens junction
121925529 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121925529 (VCL)
04810 Regulation of actin cytoskeleton
121925529 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121925529 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sund04812
]
121925529 (VCL)
04147 Exosome [BR:
sund04147
]
121925529 (VCL)
Cytoskeleton proteins [BR:
sund04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121925529 (VCL)
Exosome [BR:
sund04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121925529 (VCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
121925529
NCBI-ProteinID:
XP_042313701
LinkDB
All DBs
Position
3:149931051..150022991
Genome browser
AA seq
1142 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQTDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPSAPPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQLTDQVADLRARGQGATPLAMQKAQHVSQAL
DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQSWLADPNGGSEGEEHIRGLMAEARKIAE
LCDDPKERDDILRSLGEISALTAKLSDLRKHGKGDSPEARALAKQIATSLQNLQSKTNKA
VANSRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMMGPYRQD
LLAKCDRVEQLAAQLADLAARGEGESPQAKAIAAQLQDSLKDLKSRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNRDEVFEERAANFENHAARLGATADKAAAVGTANKSTVEG
IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKKEVENSEDPKFR
EAVKAASDDLSKTISPMVMDAKAVAGNISDPGLQKNFLDSGYKILGAVAKVREAFQPQEP
DFPPPPPDLEQLHLTDEFAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLNQPMMM
AARQLHDEARKWSSKPDVTDEVKEAPEAGVDVDQEEEEEEEEADVEFTLPSDIEDDYEPE
LLLMPTNQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNK
RALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKAT
MLGRTNISDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPW
YQ
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcttccacacccggacgatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaagagggcgaggtggacgggaaggccatcccggacctc
accgcccctgtcgccgccgtccaagccgcagtcagcaacctggtccgggttggaaaagaa
actgttcagacaactgaagaccagattctgaagagagatatgccacctgcattcataaaa
gtggaaaatgcttgcaccaagcttgtccaggcagctcagatgctccaaacagatccttat
tcagttcctgctcgtgactaccttattgatggatcaagaggcattctctctgggacatca
gacttacttctaacatttgatgaggctgaggttcgtaaaataatccgtgtctgcaaagga
attctggaatacctaactgtggcggaagtggtagagactatggaggacttggtgacgtac
acaaagaacctggggccaggaatgactaagatggccaaaatgattgatgaacgacagcaa
gagttgactcaccaggagcacagggttatgttggtgaactccatgaacacagtgaaagaa
ttactgccagttctcatttcagctatgaagatctttgtaacaactaaaaattccaaaagc
caaggaatagaagaggccttgaaaaaccgcaatttcaccgtggagaagatgagcgctgag
ataaatgaaataatccgtgtgttacagctgacttcctgggatgaagatgcttgggccagc
aaggacactgaagccatgaagagggcattggccttgatagattccaagatgaaccaagct
aagggctggctgagagaccccagcgctcctccaggagacgctggtgaacaagccataagg
cagatcctggatgaagcaggaaaagtaggagagctgtgtgcgggcaaagaacgcagagaa
attctaggaacgtgtaaaatgctaggccaattgactgatcaagtagctgaccttcgagct
agaggacaaggtgctacaccactagccatgcagaaggcccaacatgtgtcccaagcgttg
gatttactaacagcaaaagtggagaatgcagcacgcaagctggaggccatgaccaactct
aagcaagcgattgcgaagaaaattgatgctgctcagagctggcttgcagaccctaatgga
ggcagtgaaggagaagaacacatccgaggccttatggctgaagccaggaaaattgcagaa
ctctgcgatgaccccaaagagagagatgatattttgcggtccctgggcgaaatctctgct
ctgactgctaagttgtcagatctccggaaacatggaaagggggattcccccgaagccaga
gccttagccaagcagatagccacctcactccagaatttgcagtccaaaactaacaaggct
gtggcaaacagcaggcctgtcaaagctgctgtccacctggaaggaaaaattgagcaagct
cagagatggatagacaatcctacagtggatgatcgtggagtaggtcaggctgcaatccgg
ggacttgtggctgaaggacgccgtcttgccaatgtcatgatgggaccttaccgccaagat
ttgctggccaaatgtgaccgtgtggaacagcttgctgcccagttagcagatctggcagca
agaggggaaggagaatctcctcaagccaaggcaattgctgctcaactgcaggactcatta
aaggatcttaaatcaagaatgcaagaagcaatgacccaggaagtatctgatgtgtttagt
gacacaacaactccaatcaaactgttggcagtagcagccactgcacctcccgatgcaccc
aacagggatgaggtgtttgaggaacgggcagccaactttgaaaaccatgctgcaagactt
ggtgctactgctgataaggcagctgcagttggaacagccaacaaaagcacagtggaaggc
atacaagcaactgtgaagtcagcgagagaactcacacctcaggtagtatctgctgcccgt
atccttctaaggaatcctggaaatcaagctgcttatgagcactttgagaccatgaagaac
cagtggattgataatgtggaaaaaatgacaggcctggtggatgaagcaattgataccaag
tctctgctggatgcctccgaggaagccattaagaaagacctggacaaatgcaaagtggca
atggccaatattcaaccacagatgctggttgcaggagcgaccagcattgcccggcgagcc
aaccggattttgttagtggcaaagaaagaagttgaaaactcagaggatcccaaattccgt
gaagcagttaaagctgcctctgatgacttgagcaaaaccatctcaccaatggtgatggat
gcaaaagctgtggcaggcaacatatctgatcctggtttgcagaagaacttcttagattct
ggatacaagattctcggagcagttgccaaagttcgagaagcctttcagccccaagaaccc
gatttccctcctccaccacctgaccttgagcaactccatctcactgatgagtttgctcct
ccaaagccacctctgccagagggtgaggttcctccccccagaccaccacctccagaagag
aaggatgaagaattcccagaacagaaggctggtgaggtgcttaaccagcccatgatgatg
gctgccaggcagctacatgatgaagccagaaagtggtccagcaagcccgatgtgactgat
gaggttaaggaagcccctgaggctggtgtagatgtagatcaggaggaggaggaggaggaa
gaggaagcagatgttgaattcactctcccctctgacattgaagatgattacgagcctgag
ctgctgttaatgccaaccaaccaacctgttaaccagcccattctggccgctgctcagtct
ctgcaccgggaagccaccaaatggtctagtaagggcaatgatatcattgcagctgccaag
cggatggctcttttgatggctgagatgtcacgcttggtaagaggtggcagtgggaacaaa
cgggccctcatccagtgtgccaaggatatcgcaaaagcttcagatgaagttacacggctg
gcgaaggaggtggcaaagcagtgcactgacaagcgaattagaacaaatcttttgcaggtt
tgtgagcgaatcccaactatcagtacccaactcaaaatcctctcgactgtcaaagcaacc
atgctgggccggactaatatcagcgatgaggagtcagaacaggccactgagatgttggtt
cacaatgcccagaacctcatgcagtctgtcaaggagacggttcgagaagcggaggctgcc
tctattaagattagaacagatgctgggttcactctacgctgggtcaggaaaacaccttgg
taccagtag
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