Sceloporus undulatus (fence lizard): 121925687
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Entry
121925687 CDS
T07740
Symbol
NUP98
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121925687 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121925687 (NUP98)
03036 Chromosome and associated proteins [BR:
sund03036
]
121925687 (NUP98)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121925687 (NUP98)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121925687 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Ribosomal_L13
Motif
Other DBs
NCBI-GeneID:
121925687
NCBI-ProteinID:
XP_042314084
LinkDB
All DBs
Position
3:complement(887449..960089)
Genome browser
AA seq
1802 aa
AA seq
DB search
MFNKSFGTPFGGNTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSNNNTGGLFGSAQTKPG
GLFGSSTFSQPATSSTSTGFGFGTSTGTSSGLFGTASTGGGLFSSQNNAFAQNKPVGFGN
FGTSTSSGGLFGTTNTTSNPFGGTSGSLFGSASFTAVPTGTTIKFNPPTGTDTMVKSGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGTGATPGLFGSSTATSSAAT
GLFGSSTTNTGFSYGQNKTGFGTSTTGFGTGTGSLFGHPQPTTSXFNKPLVSPLRANTGF
SFGNTSTLGQPNTNTMGLFGAAQPSQPGGLFGTAANTNTATAFGTGTGLFGTASTGFGVG
SSSLFSNKPAGFGTTTTSAPSFGTTTTGLFGFGANTTGNSLFGNKPATGALGTGLGTGFG
TALNPGQTSLFGNTQPKLGGTLGTGAFGTPGFNTSTATLGFGAPQPAVALTDPNASAAQQ
AILQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPAT
RVRPKALQTTGSSKSHLFDGLDDDEPALSNGAFMPKKSIKKLVLKNLNSSSLFSPVSGEG
NDLASPLEYPENGERFSFLSRSMEENHRQDGEQEEEDTSREVTRFYSNPIAKPIPQSPEK
AMHTHHNNVDDTIMVLNARAPLRNGLEGSSEDISYHEESLQDGHDEETQDIHHSHPAGIV
LTRVGYYTIPSMEELAKMTSDQGECIVTDFTIGRKGYGSIYFEGEVSLTNLNLDEIVHIR
RKEVIVYPDDELKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLVEMNYEGRLEAV
SRKQGAQFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEGHPSKVEAKKLKTAQIPPAGQ
LMSQQMALSGKPAAPAKSPEAEQLEKGVEFDSDMADISQEPAQAFAAEESLMEDQEPVPA
STHIASSLDINPHTLQIMKASLLVDDEDLDLILDRRLSRQAAAPGTSQEICSPRLPISSL
PQGRKSRLSVGGLLQSRLSRSSLLLPPSASLQDSRGQRTSSLAGPLPTSPWPTLSPLTSV
FTMSSPAPEVPLKTVGVRRHPGLVPLEKSITNGKGRLLKDMALFMGRSFRVGWGPNWVLV
HSGERLSTSSEPEDLQSESMEYGFLPTPVAPKQLSESPFKVHVEKLSLEGKTAERSLHLY
LAPLEIKLKHSTVHMDEPCPLLTPNPGMAAIHEFATWTVETCEDPEEMEVVKDWCLVWTL
CEALWGHLKELEACLEKPSEYVLALERRKAFSRWLSQTAAERIKEEVSLSQNSNPAEAVF
SYLTGKQIREACRLAQHSGDHRLALLLSQLVGSQEVRELLALQLADWHQLQADCFIQEER
LRIYALLAGKPVWQLSERRSLNVCSQLDWKRSLGIHLWYLLPSTASLSKALSVYEAAFQD
SLERDTYACPPLPPYLEGSNCLVEEGDLHHPLRDVCFHLLKLYSDRCYDLHQLLDPKSIT
GDPLDYRLSWHLWEVLRALNYTHLSEQCQGVLNASYAAQLESEGLWEWAVFVLLHTPSAH
MRERAVREMLNRHCQLMETPDSWEKEAFLTERLCVPPAWIHEAKAMKARREGDQHKEALH
LFRAGHWNLCHRLLVRHLASDAIINENYTYLKGFLEDLSAPERSTLIQDWDTAGLVFLDY
IRVIEMLNRIQQLDCSSYELEELHTKVISLCNRIELVPCHNAKDRLAQSEMAKRNADILR
VVLSLQHPLDSASRGSVPDVQRVPLRLLAPHIGRLPMPEDYALEELRGLTQSYLRELTVV
AQ
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcatttggaacgcctttcggaggcaacaccggaggctttgggacaaca
tcaacttttggtcagaatactggctttggcaccacgagcggaggagcgtttgggacatct
gcatttggatccaataataacacaggaggactctttgggagtgcgcagaccaaacctgga
ggattatttggttcaagcactttcagccagccggctacctcttccactagcactgggttt
gggtttgggacgtccacaggaacttccagtggcttgtttggaacggcaagtacaggagga
ggcctcttctcatcccaaaacaatgcctttgcacagaacaagcctgtgggctttggtaac
tttgggacaagtaccagcagcggtggcctttttggaaccactaacacaacctccaacccc
tttgggggtacatctggctccctctttgggtcagctagctttacagctgttccaactggc
actaccattaaattcaatccgccaactgggactgacaccatggtgaaatctggagtcagt
acgaacatcagcaccaaacatcagtgtattactgcaatgaaagaatatgaaagcaaatca
ctggaggagcttcgtctagaggactaccaagcaaacaggaagggtccctccaaccctgtt
ggaactggagccacgccagggttgtttggatcatccactgccacgtccagtgcagccacg
gggctctttggttcctccaccacaaatacaggcttttcatacggacagaataagacaggc
tttgggaccagtacaacaggttttggaacaggaactggcagcctctttggccacccccag
ccgacaaccagcnccttcaacaagcccttggtcagcccactacgagcgaacacaggcttt
tcgtttgggaataccagcacccttggacagcccaatacaaatacaatgggtttatttgga
gcagcgcagccttcgcagccaggaggcctttttggaacagccgccaacacgaatacggcc
actgcctttggaactgggacagggctctttggaacagccagtactggatttggagttggc
agctcgtccctgtttagcaacaagcctgctgggtttggaaccacaaccaccagcgcaccc
tcctttggaacaacgacaactggactttttggttttggtgcaaacaccactgggaacagc
ctttttgggaataagccagccacgggggccctgggaactggactcggaacaggatttggg
acagccctcaatccagggcagacctcgttgtttgggaacacccagccaaaactaggaggc
acactggggacaggagcatttggcacccctggatttaatacatcaacagccacccttggc
tttggagctccccagcccgctgtggctttgacagacccaaatgcttctgcagcccagcaa
gcaattcttcagcagcacctcaacagcctgacttactccccctttggagattccccactt
ttcagaaaccccatgtctgaccccaagaagaaagaagagaggctcaagccaaccaacccg
gcggcccagaaggcgttgaccactcccacccactataagctgacccctcgccctgcgacc
cgagtgcgtccaaaggctttgcagacaacgggctcctccaaatcccacctctttgatggc
ctggatgacgatgagcctgccctctcgaatggggctttcatgcccaagaagagcattaag
aagctggtcttgaagaaccttaacagcagcagtctcttctctcctgtcagtggtgaaggc
aacgaccttgcttcgcccctggagtacccagagaacggagaacgattcagcttcctctcc
aggtcgatggaagagaaccatcggcaggacggggagcaggaggaagaagacacctctcgc
gaagtgacgcggttctactccaaccccatcgccaagcccatcccacagagtcctgagaag
gccatgcacacgcatcacaacaatgtggacgacaccatcatggtcctgaacgcaagagca
cctctgcggaatgggctggaaggcagcagtgaggacatctcctaccatgaagagtccctg
caggatggccacgatgaagagacgcaggatatacaccattcgcatcctgctggaattgtt
ttaacccgggttgggtactacaccattccatccatggaagaactagccaaaatgaccagc
gaccagggggagtgtatcgtgacggacttcaccataggccgcaaaggctatggctcaatc
tactttgaaggcgaagtcagcctcactaacctgaatttggatgagatcgtgcacatccgc
aggaaagaggtcatcgtctacccggatgatgaattgaaaccacccattggagaaggcttg
aacaggcgagctgaagtcactttagacggagtttggcctacagacaaaacctcacgttgc
ttgatcaagagtcccgaacggctggtagaaatgaactacgaaggcaggctggaggctgtc
tctcggaagcagggtgcccagttcaaagagtaccgccctgagactggttcatgggtattt
aaggtggctcacttctcaaaatacggcttgcaagattctgatgaagaggaggaggaaggc
cacccctcaaaagtggaggcaaagaaattaaaaacagctcaaattcccccagcaggccag
ttgatgtctcagcaaatggctctaagtggaaagccagcagcacccgccaagagcccagaa
gctgagcagctggaaaagggtgtggagtttgacagcgacatggcagacatcagtcaggag
cccgctcaggcttttgctgcagaagaaagccttatggaggatcaggagccagtgcctgcc
tccacccacattgcatcttctctggacatcaaccctcacactttgcagatcatgaaggca
tcattgcttgtggatgatgaagatttggacttgattctggatcgccgcttgagtagacaa
gctgcagccccaggcacttcccaggagatctgctcccccagacttcccatctcctcgctg
ccgcaaggacggaagagccgcctctcagttggtgggttgctgcagtcaaggctttccagg
agctctctccttctccccccatctgcctccctccaggacagccgtggccaacggacgtcg
tctctagcaggccctcttcccacatcgccttggccaaccctttctcccctgacttcagtc
ttcacaatgtccagcccagcacctgaagtacctctgaaaacagttggtgtccgcaggcac
cctgggctcgtgcccctggaaaagtccatcaccaatgggaaggggaggctgctgaaggac
atggcactcttcatgggccgctctttccgtgtcggctggggacccaactgggttctggtc
cacagcggtgagcggctgagtacatcaagcgagccagaagacctccaaagtgagtccatg
gagtatgggttcttgcccacgcctgttgctccaaaacagctctcagagtctcccttcaag
gttcatgtagaaaagctgagcttggaaggaaaaacagctgagagaagtctacacttgtac
ctcgctcccttagaaatcaagctgaagcacagcactgttcatatggacgagccctgcccc
ctcttgacccccaaccctggcatggcagccatccatgagtttgccacatggactgtggag
acatgtgaagacccagaagaaatggaagtggtaaaagactggtgtctggtgtggaccttg
tgcgaagcactctgggggcacttgaaggagctggaggcctgcctggaaaagcccagcgaa
tatgtcttggccctagaacgccggaaggccttctctcgctggctgtcccagacagccgct
gagcgcatcaaggaggaggtttcacttagtcagaacagcaatcctgcagaagccgtcttc
agctacctcaccggcaaacagatcagggaagcctgtcggctggcacagcactctggtgac
cacaggctggctctgctcctctcacagctggttgggagccaggaggtccgggagctcctt
gccttgcagttggcagactggcatcagctccaggcagattgcttcatccaggaggagagg
ctgcgcatatatgccctgctagctgggaagccggtgtggcagttgtcagagaggagaagc
ctcaatgtctgttcccagttggactggaagcggtctcttggcatccacctctggtacctg
cttccttccacggcttccctttccaaggccctgtctgtgtacgaagcagccttccaggac
tcactggagcgtgacacgtatgcctgtcctcccctacctccctatctggaagggtccaac
tgcctggttgaggaaggggatttgcaccacccgctgcgagatgtctgctttcacctctta
aaactgtacagtgacagatgctacgatctccaccagctgcttgacccaaagagcatcacc
ggtgaccccttggactaccgcctcagctggcacctgtgggaagtgctgcgtgccttgaat
tacacccacctctcggagcagtgccagggggtgctgaatgccagctacgcggcccagctg
gagagcgaggggctgtgggaatgggcagtctttgtgctactccacacgcccagtgcccac
atgcgtgagagagctgtgcgcgaaatgctgaatcgccattgccagttaatggaaacgccg
gattcctgggagaaagaggcctttctcacggagaggctctgtgtgcccccagcgtggatt
cacgaggcaaaggccatgaaggcccggagggagggtgaccagcacaaggaggccctgcat
ctgttccgggcaggtcattggaacctgtgccaccggctgttggtcaggcacttagcttca
gatgccatcattaacgaaaactacacctacctgaaaggattcttagaagacctgtctgcc
ccagaacgcagcacactcatccaggattgggacactgcagggctggttttcctggactac
attcgggtcattgagatgctcaacaggattcagcagctggattgctccagctatgaactg
gaggagctgcacaccaaagtgatttcgctctgcaacagaatagagctggtcccttgccac
aatgccaaggacagattggcccagtctgaaatggcaaagcggaatgcagacatcttgcgg
gtggtgctgagcctgcagcaccctctggactcggcctcaaggggcagtgttcctgatgtg
cagcgggtgcccttgcggctcctggctccccacatcggacggctgcccatgcctgaagac
tacgccctggaggagctgcgtggcctcacccagtcttacttgcgagaactgacagtggtg
gcccagtga
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integrated database retrieval system
