Sceloporus undulatus (fence lizard): 121925762
Help
Entry
121925762 CDS
T07740
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sund03037
]
121925762 (IFT88)
Cilium and associated proteins [BR:
sund03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
121925762 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_6
TPR_8
TPR_7
TPR_19
TPR_14
TPR_16
ANAPC3
TPR_17
TPR_11
TPR_9
TPR_10
ARM_TT21_4th
TPR-S
TPR_CcmH_CycH
TPR_15
HAT_PRP39_C
ARM_TT21_C
ARM_TT21_2nd
DUF6584
MIT
Consortin_N
TPR_21
Motif
Other DBs
NCBI-GeneID:
121925762
NCBI-ProteinID:
XP_042314235
LinkDB
All DBs
Position
3:27919138..27976327
Genome browser
AA seq
823 aa
AA seq
DB search
MMKNVHLAPEADEDDLYSGYNDYNPTFDTEDLENDPAFQQAVKTSHGRRPPLTAKVPGTS
SSRTLATGYGSKTMLSSSTGRPMTATVQDGVARPMTAVQAAGYTKATSRGAAFDPLGQAR
GPAPPLETKNEDSPEGKIKQLEKKVNELVEESCIAHSCGDLKLALEKAKDAGRKERGLVR
QREQTISLATMNLDLSYTVLFNLASQYAANEMYAEALNTYQVIVKNKMFVNGGTLKVNMA
NIYLKQRNYSKAIKFYRMALDQIASIHKEMRIKIMQNIGIAFIKTGQYTDAISSFEHIMS
TSPSLKAGFNLILCYFATGDRDQMKKAFQKLIAVPLEIDDDDKYISQGDDTHTNLLIEAI
KNDSLRQMERERKATAEKYIMTAAKLIAPVIETSFAVGYDWCVEAVKVSQYVELANDLEI
NKAITYLRQKDFNQYEEAVETLKMFEKKDSRVKSAAATNLSFLYFLENEFTQASNYADLA
VTSDRYNPAALTNKGNTIFANGDYEKAAEFYKEALRNDSSCTEALYNVGLTYKKLNRLDE
ALDSFLKLHAILRNSAQVLFQIASIYELMEDPNQAIEWLMQLISVVPTDSHALAKLGELY
DNEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIHYFERAALIQPTQVKW
QLMVASCYRRSGNYQKALDTYKMIHRKFPDNAECLRFLVRLCTDMGLKETQEYAAKLKRV
EKLKEIREQRVKSGRDGSARARREGSAGGDPGSITVKGERLSAKLKSLPGTNDPYESSVS
KEIDASYMDPLGPQVERPKTAMKKRMDEDEFADEELGDDLLPE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaatgtccacctggcacctgaagcagatgaagatgatctttattctggttac
aatgactataaccctacatttgatacagaggatttagaaaatgatccagcttttcaacag
gctgtgaaaactagtcatggtagaagacctccacttacagccaaagttccaggtacatcc
agttcacgaactttagctaccggatatgggtcaaagacaatgctctcttcatccactggc
agaccaatgacagcaactgtacaggatggagttgctcgacctatgacagcagttcaggca
gcaggttacacaaaagcaacttcaagaggtgctgcatttgatcctcttggccaagctagg
ggaccagctcctcctctagaaacaaaaaatgaagatagtccagaaggaaagattaaacag
ttggagaaaaaagtaaatgagttggttgaagaaagctgtattgctcatagttgtggagat
ttaaagttggctcttgagaaagcaaaagatgctggaagaaaagaaagaggacttgtaagg
caacgtgaacagacaatatctcttgctaccatgaatctagatctttcttacactgtactt
ttcaatttggctagccaatatgctgctaatgaaatgtatgcagaagcattaaatacctat
caggttatagtgaaaaacaagatgtttgttaatggaggcacgctgaaggtgaacatggca
aacatctatttgaaacagagaaactattcaaaggccatcaaattctaccgaatggctcta
gatcaaattgcaagtatccataaggagatgaggattaaaataatgcagaacattggaatt
gcatttattaaaactggccagtatactgatgccattagctcatttgagcacattatgagc
acttcaccaagcctgaaagcaggcttcaatttgatcctttgctattttgctactggagac
agagaccaaatgaaaaaagcttttcaaaaattaattgctgttccactggaaattgatgat
gacgacaagtatatttcacaaggagatgatacacatacaaacctattaatagaggcgatt
aaaaatgatagtttacgacaaatggaacgtgaaaggaaagctacagcagaaaaatacatc
atgacagctgctaaattaattgctccagtaattgaaacatcatttgcagttggctatgat
tggtgtgtagaagcagtaaaagtttctcagtacgtcgaattagccaatgacctggaaatc
aataaagcaattacatatttgcggcaaaaggattttaaccagtatgaagaggctgtggag
acattaaagatgtttgaaaaaaaggatagcagagttaaaagtgcagctgcaacaaacctt
tcctttctttatttcctggaaaatgaatttacacaggccagcaactatgcagatttagct
gtaacttctgatagatacaacccagctgctcttacaaataaaggaaataccatttttgca
aatggagactatgaaaaagcagcagagttttataaagaagctctaaggaatgattcttca
tgcactgaagcactttataatgttggtttaacatacaaaaagctgaacaggttagatgag
gcactagattcttttctgaagcttcatgctatccttcgaaatagtgcccaggttcttttc
caaatagcaagcatatatgaattaatggaggatccaaatcaggccattgagtggcttatg
cagcttatcagtgttgttccaacagactcgcatgcattagcaaaacttggggaactctat
gataatgaaggggataaatcacaagcttttcaatattactatgagtcctatcggtatttc
ccttcaaacattgaggtcattgagtggcttggagcctattacattgacacacaattttgt
gaaaaagctattcactactttgaaagagcagcacttattcagccaactcaggtgaagtgg
caattgatggttgctagctgctacagaagaagtggtaactaccaaaaagcccttgatacc
tacaagatgattcacagaaaatttccagataatgctgaatgtttacgtttcttggtccga
ctatgcacagacatgggcttgaaggaaacccaagagtatgcagctaagcttaagagagtg
gaaaaactgaaagaaataagggaacagcgtgtcaagtctggcagagatggcagcgctcgt
gcccgcagagaagggagtgctggtggtgatcctggtagcattactgttaaaggggaacgt
ctgagtgctaaactgaagtctttgccagggacaaatgacccatatgaaagcagtgttagt
aaagaaatagatgcctcctatatggacccacttggaccccaagttgagagaccaaaaact
gccatgaagaaaagaatggatgaagatgaatttgctgatgaagaactaggagatgatttg
cttcctgaataa
DBGET
integrated database retrieval system
