Sceloporus undulatus (fence lizard): 121925866
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Entry
121925866 CDS
T07740
Symbol
PKD2L1
Name
(RefSeq) polycystic kidney disease 2-like 1 protein
KO
K04990
polycystin 2L1
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sund03037
]
121925866 (PKD2L1)
04040 Ion channels [BR:
sund04040
]
121925866 (PKD2L1)
Cilium and associated proteins [BR:
sund03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121925866 (PKD2L1)
Ion channels [BR:
sund04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121925866 (PKD2L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_6
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
121925866
NCBI-ProteinID:
XP_042314373
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All DBs
Position
3:complement(146658661..146814614)
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AA seq
781 aa
AA seq
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MSSSHLSNRAESHFQAQEEHELDTLGKNAWDNPVYNGSPSSSLKIRAIYNPKSILENPYE
NIEKLSDSLPYEKEIKKAEEVKKEKKPFPGCCFYIFKGIRGLWGTTLTENTAENRELYVK
TTLRELLVYIVFLVDICLLTYGMTSSNAYYYTKVMSELFLQTPSDSVGSFETIGSMNDFW
GYAQGPLLDSLYWTKWYNNKSLGQSPQSYIYYENLLLGVPRIRQLKVQNNSCVVHDDFKE
DIFGCYDVYSEEKEDKSPFGLLNGTAWQYHTEEELDGSSHWGKLTTYSGGGYYIDLKMTR
EESAEALQILKENLWLDRGTRVVFLDFSVYNANINLFCVLRLVVEFPATGGAIPSWQIRT
VKLLRYVSTWDFFIVACEIVFCVFIFYYVVEEILELHIHRLQYFTSIWNILDIVVILLSI
VAIAFHIFRTIKVNRLMGQLLKNPCIYADFEFLAFWQTQYNNMNAVNLFFAWIKIFKYIS
FNKTMTQLSSTLARCAKDILGFAIMFFIVFFAYAQLGYLLFGTQVENFSTFVKCIFTQFR
IILGDFDYNAIDNANRILGPIYFVTYVFFVFFVLLNMFLAIINDTYSEVKEELSNQKNEL
QLSDILKQGYNRTLMKLKLKKDRISDVQKALQKGTKELEFEDFKNSLRKLGHAEHEITAA
FAKFDKDGNQILDEEEQKRMRNDLEEKRVALNEEIENLGNSFRDNSLEDTLSFGDAKNNL
ANKSSLVSEEEFQRLLQRVLQLEHSIANIISKTEALVVKLEGIERSKVRNNDPGEKLFDA
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttcccacctaagcaacagagctgaaagccatttccaagctcaagaagaacat
gaactggacactctggggaagaatgcgtgggacaatcctgtttataatggttcaccttcc
tcctccctgaaaatcagggctatctacaaccccaaatcaatcctagaaaacccttatgag
aatattgagaaactgtctgactctctaccctacgaaaaagaaataaagaaagctgaggaa
gtgaagaaggagaagaagcccttccctggatgctgcttctatatcttcaagggcatccga
ggactttggggcacaactctgactgaaaacaccgctgagaaccgagaactttatgtaaag
accacactgcgtgaactgttggtttatattgtattcctggtggatatctgtttgttgact
tatgggatgacaagttcaaacgcctattactacaccaaagtgatgtctgaacttttcttg
caaactccttcagatagtgttggatccttcgagactattggaagcatgaatgacttttgg
ggctatgcacaaggccctttattggacagcctgtattggaccaagtggtataacaataaa
tccctgggccagagccctcaatcctatatctactacgagaacctgctgcttggtgtgcca
cgaattcgccaactgaaggtccagaacaactcatgtgtggtgcatgacgactttaaggaa
gacatctttggctgttatgacgtatatagtgaggagaaggaggataaatctccctttgga
ctcttgaatggaacagcttggcaatatcacacagaagaagaacttgatggctcatctcac
tggggcaagctaacaacttacagtggaggggggtattacatagatctcaaaatgacccgg
gaggaaagtgctgaagctcttcaaatattgaaagaaaacctgtggctagatcggggaact
cgtgtggtttttctcgatttctctgtgtacaatgccaacatcaatcttttttgtgtgctc
aggttggtggttgaattcccagccacaggtggtgccatcccttcctggcagataagaaca
gtaaaactcctccggtatgtcagcacttgggatttcttcattgttgcttgtgagattgtc
ttctgtgtcttcatcttctactacgttgtggaagagatcttggagttacatattcacagg
cttcagtacttcaccagtatttggaatatcttggatatagtcgtcatattgctttctatt
gtagctattgcattccacatctttcgcaccattaaagtcaataggttgatggggcagctg
ttgaaaaacccctgcatctatgcagattttgagttcctcgctttctggcaaacccagtac
aacaatatgaatgctgtgaacctattctttgcctggattaagatttttaaatacattagc
tttaacaaaacaatgacgcagctctcctccacattagcccgttgtgccaaggacatcctg
ggctttgctatcatgttcttcattgtcttctttgcatatgcacaactgggatatcttctt
tttgggactcaagtggaaaatttcagcacttttgttaaatgcatcttcacccagtttcga
atcatccttggtgattttgactacaatgcaattgacaatgccaacaggatcttggggcct
atttattttgtcacctatgtcttctttgtcttctttgtgctattgaacatgttcctagct
atcatcaatgacacttattcagaagtcaaagaggagctttcaaaccagaaaaatgaactg
caactgtcagacatcctgaaacagggctataacagaacactaatgaagctgaagctgaaa
aaggaccgtatctctgatgtacagaaagctttgcagaagggaaccaaggagctggaattc
gaggatttcaaaaacagcttgagaaagcttggccatgctgagcatgaaatcacagcagcc
tttgcaaagtttgataaagatggtaaccagattcttgatgaagaagagcagaagagaatg
cgaaatgacttggaggagaaaagggttgctctaaatgaagaaatagagaacttggggaac
tccttcagggacaacagcttggaagacacccttagctttggagatgcaaaaaataatcta
gcaaacaaatctagcttggtgtctgaagaagaattccaaagactcttacagcgggtactg
cagttggagcattccattgccaacatcatatccaagactgaagccttggttgtgaaactg
gagggcatagagagaagcaaagtaaggaacaatgacccaggggagaagctatttgatgct
agatag
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