Sceloporus undulatus (fence lizard): 121925889
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Entry
121925889 CDS
T07740
Symbol
DDX21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sund
Sceloporus undulatus (fence lizard)
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sund03009
]
121925889 (DDX21)
03036 Chromosome and associated proteins [BR:
sund03036
]
121925889 (DDX21)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121925889 (DDX21)
Ribosome biogenesis [BR:
sund03009
]
Eukaryotic type
Pre-60S particles
Helicases
121925889 (DDX21)
Chromosome and associated proteins [BR:
sund03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121925889 (DDX21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
121925889
NCBI-ProteinID:
XP_042314392
LinkDB
All DBs
Position
3:169298588..169315823
Genome browser
AA seq
692 aa
AA seq
DB search
SEIDFYFFVIFAFQKDKKDKSKKQKVKKHKSQPEENGLSDSELEPPKPKKIKKKKEMVDD
IETVIAEYETTSSVSNGVDHLKKQSNAEESNTDCESDQDPELTEEQKQGDFSNFDISKAT
LDLLKARGVTYLFPVQAKTFKYIYDGKDVIAQARTGTGKTFSFAIPLIEKLQRDSQERKR
GRTPKVLVLTPTRELAMQVAKDFKDVTKKLTVACFYGGTAYNGQFDLIRNGIDILVGTPG
RIKDHLQNGKLDISSLKHVVLDEVDQMLDMGFAEQVEEILAYTYKKDSESNPQTLLFSAT
CPHWVYDVAKKYMKSKYEQIDLIGKKTKKTAMNVEHLAIECHWSQRAAVIGDVLQVYSGS
HGRTIIFCETKKEATELALNASIKQDAQSLHGDIPQKQREVTLKGFRNGAFGVLVATNVA
ARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGMCICFYQRKEDYQLKQVEQKAG
ITFKRVGVPTATDIIKASSKDAIKSLDSVPPSAIDYFRQSAERLIEEKGAVEALAAALAH
ISGATSIEQRSLLNSDAGYVTMRLQCSVEMHSIGYAWRGLKEQLGEDIDNKVFRMRFLKG
KTGVCFDIPVAELNKMQQTWQDTRRWQLSVATELPELEESPNEGGRGGGGGGSDFRNGRR
GGGSNFRNGRRGGGRNDRFRNRGQKRSFDRAF
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
tctgagattgatttttatttctttgtaatttttgccttccagaaggataaaaaagataaa
tctaaaaaacaaaaagtgaaaaagcacaaatcccagccagaggaaaatgggctgtctgat
tcagaactggagcctcccaaaccaaagaaaatcaagaaaaagaaagaaatggtggatgac
attgaaactgtaattgcagaatatgagacaacatcctctgtaagtaatggggttgatcac
ttgaaaaagcaaagcaacgctgaagaatcaaatacagattgtgaaagtgaccaagatccg
gaattgacagaagaacagaagcaaggagacttctccaattttgatatctctaaagcaact
cttgaccttctaaaagctcgtggagttacctacctgtttccggtgcaagcaaaaactttc
aaatatatatatgatggcaaagatgtgatagctcaagctcgtactggaactggaaaaact
ttttcttttgccattccattaattgaaaaacttcagagagattcccaagaacgaaaaaga
ggccgaactccaaaggtgcttgttcttactccaacccgagagctggccatgcaggtagcc
aaagacttcaaagatgtcacaaagaaactgactgtagcttgcttctatggaggaactgca
tataacggacagtttgatctaattcgaaatggcattgacatcctggttgggactccaggg
agaatcaaagaccaccttcaaaatggcaagttggacatttccagtctgaagcatgttgtc
ctggatgaagttgaccaaatgttggacatgggctttgctgaacaagtagaggaaatctta
gcatacacttacaaaaaagattctgaaagcaatccgcagacattactgttttctgcaact
tgcccacattgggtttatgatgtagcgaagaagtacatgaaatccaaatatgagcaaatt
gatcttattggaaagaagactaaaaaaactgctatgaatgtagaacatttggctattgag
tgtcattggtcccaaagagctgctgtcattggagatgttcttcaagtctacagtggtagt
catggacgtaccatcattttttgtgagacaaagaaagaggcaactgaactggctctgaac
gcctcaattaaacaggatgcacagtctttacatggagacattccacaaaaacagagagaa
gtcaccctgaaaggatttcgtaatggagcttttggagttctggttgcaaccaatgtagct
gcccgtggtttagatatcccagaggttgatttggtaatacagagttcaccaccaaaggat
gtagagtcctatattcatcgttctggacgcacaggccgagctggacgaactgggatgtgt
atctgtttctatcagcgcaaagaagattatcagctgaaacaagtagaacagaaagcgggg
attacatttaaacgtgtaggtgttccaacagcaacggacataattaaagcttccagtaaa
gatgcaatcaaatctttggattctgttcctccatctgccattgactacttccgacagtct
gctgaacgactgatagaggaaaagggagcagtggaagctctggctgcagctctggctcat
atttcaggagccacatccattgagcaacgttctttacttaactctgatgcgggttatgtg
accatgagacttcagtgctcagtagaaatgcactcaattggctatgcttggcgaggtcta
aaagagcagctgggtgaggacattgacaacaaagtgttcagaatgcgttttctcaagggg
aagacgggtgtttgttttgatattcctgtagctgaactaaataaaatgcagcaaacctgg
caagacacaagacgctggcaactctcagtggcaacagaattacctgagcttgaagaatca
cccaatgaaggtggccgaggtggtggcggcggcggctctgatttcaggaatgggagacga
ggtggtggctccaacttcagaaatggaagacgaggtggcggcaggaacgacagattcaga
aacaggggccaaaaacgaagctttgaccgggcattttga
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