Sceloporus undulatus (fence lizard): 121926452
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Entry
121926452 CDS
T07740
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
sund
Sceloporus undulatus (fence lizard)
Pathway
sund03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sund00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121926452 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sund03019
]
121926452 (DHX36)
03012 Translation factors [BR:
sund03012
]
121926452 (DHX36)
Enzymes [BR:
sund01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121926452 (DHX36)
Messenger RNA biogenesis [BR:
sund03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121926452 (DHX36)
Translation factors [BR:
sund03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121926452 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_23
NPHP3_N
Sir1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
121926452
NCBI-ProteinID:
XP_042315380
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All DBs
Position
3:complement(243317109..243348965)
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AA seq
995 aa
AA seq
DB search
MSYEHRRDWSRGGGPRASQAASSSSAAAASSSSGRGGRGGGGGGRGRPPPHLKGREIGLW
YARRQGEKSKEAERQQRAVVRMDERREEQIVQLLNTVQNKNEKEQEAISWWSDEEGYTKE
IPAKPKPVVEKPVVEKAPQRTRPTFEKTVLDQDSEYLLQESRPDNDLDEQLKEELKKKRN
DSRYIEMQRFREKLPSYGMRKELVNLINSSQVTVISGETGCGKTTQVTQFILDDYIERGK
GSSCRIVCTQPRRISAISVAERVAAERAEACGNGRSTGYQIRLESRLPRRQGSILYCTTG
IVLQWLQSDKLLSSVSHVILDEIHERNLQSDVLMTIIKDLLSIRLDLKVILMSATLNAEK
FSEYFDNCPMIHIPGFTYPVKEYLLEDVIEMLRYIPENTDHRPHWKKRFMQGHISRPEKE
EKEEIYQERWPDYLRQIRGRYSESTIDALEMMDDDKIDLNLIAALIKYIALEEEEGAILV
FLPGWDNISTLHDLLTSQLMFKSDRFIIIPLHSLMPTVNQTEVFKKTPPGVRKIVIATNI
AETSITIDDVVYVIDGGKIKETNFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGQCYH
LYNGLRANLLDDYQLPEILRTPLEELCLQIKILKLGGIAHFLSKVMDPPSKDAVLLSIKH
LMQLNALDRQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVI
PLGKEKVADARRKELSKNSKSDHLTVVNAFQGWEEARRRGFRCEKDYCWEYFLSPNTLQM
LSNMKGQFAEHLLAAGFVNSRSPRDPKSNINSDNEKVLKAVICAGLYPKVAKIRANFNKK
RKMVKVSTKTDRTVNIHPKSVNVEETEFHYSWLVYHLKMRTSSIYLYDCTEVSPYCLLFF
GGDISIQKDKDQDTIAVDEWIVFQSPARIAHLVKDLKEELDDLLQEKIENPQPVDWNNTK
SRDTAVLTAIIDLITTQENETARNFAPRFQNEQYS
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgagttacgaacaccgccgggactggagccgcgggggcgggcctcgggcctcccaggct
gcctcttcctcgtccgccgctgctgcttcttcctcttctggccgcggagggagaggagga
ggaggaggaggccggggccgccctcctccgcacctgaagggccgcgagatcggcctgtgg
tacgcgcggcggcagggcgagaagagcaaggaggccgagaggcagcagagggctgtggtg
cgtatggatgagcgcagggaagaacagattgtacagttgttgaacactgtccagaataaa
aatgaaaaagagcaagaagccatatcttggtggtctgacgaagaagggtacacaaaagag
attcctgccaaaccaaagcctgttgtggagaaaccagttgtggaaaaggcccctcagaga
actagaccaacttttgaaaaaacagtcctagatcaagattcagaatatctcttacaagaa
agcaggccagataatgatttagatgagcaacttaaagaagaactgaaaaagaaaaggaat
gattccagatatattgagatgcagagatttcgtgagaagctgccttcttacggaatgagg
aaggagcttgtaaacctcataaacagcagtcaggttaccgttataagtggtgagactggg
tgtggaaagaccacacaagttacccagttcattttggatgactatattgagagagggaag
ggatcttcttgccggattgtatgtactcagcctaggaggatcagtgctatttctgtagca
gagagagttgcagctgaaagggctgaagcatgtggtaatggaaggagcactggatatcaa
attcgtcttgaaagccggttgccaaggagacaaggttcaattttgtactgcacaacagga
attgtcctgcagtggctccagtcagacaagctgttgtccagtgtaagtcatgtaatcctt
gatgaaatccatgagagaaatctacaatcagatgtattaatgacaatcattaaagatctc
ctgagtatacggctagacctgaaagtaatactgatgagtgctacactgaatgctgagaag
ttttcagaatattttgacaattgtcctatgatccacattcctggcttcacctatcctgtc
aaggagtaccttttagaagatgtaatagagatgcttaggtacattccagaaaacacagat
cacagaccacactggaagaagaggtttatgcaaggacatataagtaggccagagaaagaa
gaaaaagaagaaatttatcaagagcgctggccagattacttaaggcagattagaggacgg
tattcagaaagtacaattgatgcactggaaatgatggatgatgataaaattgaccttaat
ttgattgctgcactgatcaaatatattgctcttgaggaagaggaaggtgcaatattggta
tttcttcctggatgggacaacattagcactctacatgaccttctcacatctcaacttatg
tttaagtcagacaggttcatcatcatacctttgcattcactgatgcctactgttaaccag
actgaagtgtttaagaaaacccctcctggagttcgtaaaattgtaattgctaccaacatt
gctgagactagcattaccatagatgatgtggtgtatgttatagatggagggaagataaag
gaaactaattttgatacacagaacaacattagcacgatggctgctgagtgggttagcaaa
gcaaatgctaagcaaaggaaaggtagagcaggaagagtccagccaggtcagtgctatcac
ttgtacaatggtcttcgtgcaaatctgctggatgattaccagttgccagaaatcttgagg
acacctttggaagaactttgtttgcaaataaagattttaaagcttggaggaattgctcat
tttctgagtaaggtaatggatccaccatcgaaggatgcagtgttgctgtccataaaacat
ctcatgcagctgaatgcattggataggcaagaagaacttaccccccttggagtccatttg
gccaggttaccggtggagcctcacataggaaagatgattctcttcggagctttattctgt
tgcttagatcctgttctcactattgcagccagcctcagcttcaaggatccttttgttatt
cctttgggtaaagaaaaagtagcagatgcaagaagaaaggaactatcaaagaattctaaa
agtgatcacctcacagttgtgaacgcttttcagggttgggaagaagctcgacgacgtggc
ttcaggtgtgagaaggattattgctgggagtattttctttctccaaatactttgcagatg
cttagtaacatgaaagggcagtttgctgagcatcttcttgcagctgggtttgtaaatagc
agaagtcccagagatcccaaatccaacattaactcagacaatgagaaggtattgaaagct
gttatctgtgctggcttgtatccaaaggttgcaaaaattcgagcaaacttcaacaaaaag
aggaaaatggttaaagtatccactaaaacagatcgaacagttaacattcatcccaaatct
gtgaacgttgaggagacagaattccattacagctggcttgtttaccatttgaaaatgcgg
accagtagtatatacctgtatgattgtacagaggtttcgccgtattgtcttttgttcttt
ggaggagatatttccatacagaaggacaaagatcaagatacaattgctgtggatgaatgg
attgtttttcagtctccagcaagaatagctcatctagtcaaggatttgaaagaagaattg
gatgaccttctacaagagaaaatagaaaacccccagcctgtggactggaacaatactaaa
tcaagggacactgcagtgctgacagctattatagacttaatcacaacacaggagaatgaa
actgccagaaactttgcccctcgtttccagaatgaacaatacagttaa
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